RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 TOMM7Q9P0U1 55 aa7.66□□□□□ -1.18
VPS13D-204ENST00000469054 C11orf86A6NJI1 115 aa7.65□□□□□ -1.18
VPS13D-204ENST00000469054 RNF151Q2KHN1 245 aa7.65□□□□□ -1.18
VPS13D-204ENST00000469054 C6orf226Q5I0X4 101 aa7.65□□□□□ -1.18
VPS13D-204ENST00000469054 UNQ6190/PRO20217Q6UXQ8 127 aa7.65□□□□□ -1.18
VPS13D-204ENST00000469054 Q8IZM0 81 aa7.65□□□□□ -1.18
VPS13D-204ENST00000469054 PKIGQ9Y2B9 76 aa7.65□□□□□ -1.18
VPS13D-204ENST00000469054 F8VRH5 84 aa7.64□□□□□ -1.19
VPS13D-204ENST00000469054 SPINK8P0C7L1 97 aa7.64□□□□□ -1.19
VPS13D-204ENST00000469054 C10orf25Q5T742 122 aa7.64□□□□□ -1.19
VPS13D-204ENST00000469054 SCXQ7RTU7 201 aa7.64□□□□□ -1.19
VPS13D-204ENST00000469054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.64□□□□□ -1.19
VPS13D-204ENST00000469054 HERC2O95714 4834 aa7.63□□□□□ -1.19
VPS13D-204ENST00000469054 H0Y8G0 127 aa7.63□□□□□ -1.19
VPS13D-204ENST00000469054 PANO1I0J062 215 aa7.63□□□□□ -1.19
VPS13D-204ENST00000469054 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
VPS13D-204ENST00000469054 CKS1BP61024 79 aa7.63□□□□□ -1.19
VPS13D-204ENST00000469054 CIRBPQ14011 172 aaKnown RBP7.63□□□□□ -1.19
VPS13D-204ENST00000469054 TMEM170BQ5T4T1 132 aa7.63□□□□□ -1.19
VPS13D-204ENST00000469054 C2orf82Q6UX34 121 aa7.63□□□□□ -1.19
VPS13D-204ENST00000469054 CIRBP-AS1Q8TBR5 109 aa7.63□□□□□ -1.19
VPS13D-204ENST00000469054 C6orf48Q9UBA6 75 aa7.63□□□□□ -1.19
VPS13D-204ENST00000469054 IGKV2-24A0A0C4DH68 120 aa7.62□□□□□ -1.19
VPS13D-204ENST00000469054 TRBV30A0A0K0K1B3 111 aa7.62□□□□□ -1.19
VPS13D-204ENST00000469054 LOC107984640A0A0U1RRK4 108 aa7.62□□□□□ -1.19
VPS13D-204ENST00000469054 ODF1Q14990 250 aa7.62□□□□□ -1.19
VPS13D-204ENST00000469054 COX7B2Q8TF08 81 aa7.62□□□□□ -1.19
VPS13D-204ENST00000469054 DPH3Q96FX2 82 aa7.62□□□□□ -1.19
VPS13D-204ENST00000469054 MAP1LC3CQ9BXW4 147 aa7.62□□□□□ -1.19
VPS13D-204ENST00000469054 FAT1Q14517 4588 aa7.61□□□□□ -1.19
VPS13D-204ENST00000469054 A0A096LNI7 61 aa7.61□□□□□ -1.19
VPS13D-204ENST00000469054 IGLV5-39A0A0G2JS06 123 aa7.61□□□□□ -1.19
VPS13D-204ENST00000469054 CXCL5P42830 114 aa7.61□□□□□ -1.19
VPS13D-204ENST00000469054 GAGE2BQ13066 116 aa7.61□□□□□ -1.19
VPS13D-204ENST00000469054 SPACA4Q8TDM5 124 aa7.61□□□□□ -1.19
VPS13D-204ENST00000469054 LINC00474Q9P2X8 69 aa7.61□□□□□ -1.19
VPS13D-204ENST00000469054 SMR3BP02814 79 aaPredicted RBP7.6□□□□□ -1.19
VPS13D-204ENST00000469054 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
VPS13D-204ENST00000469054 PTTG1IPP53801 180 aa7.6□□□□□ -1.19
VPS13D-204ENST00000469054 MAJINQ3KP22 176 aa7.6□□□□□ -1.19
VPS13D-204ENST00000469054 Q8N1X5 172 aa7.6□□□□□ -1.19
VPS13D-204ENST00000469054 A0A087WYN8 130 aa7.59□□□□□ -1.19
VPS13D-204ENST00000469054 TMEM223A0PJW6 202 aa7.59□□□□□ -1.19
VPS13D-204ENST00000469054 RPL18AQ02543 176 aaKnown RBP7.59□□□□□ -1.19
VPS13D-204ENST00000469054 KRTAP17-1Q9BYP8 105 aa7.59□□□□□ -1.19
VPS13D-204ENST00000469054 SYS1-DBNDD2H3BUS1 97 aa7.58□□□□□ -1.2
VPS13D-204ENST00000469054 C9orf116Q5BN46 136 aaPredicted RBP7.58□□□□□ -1.2
VPS13D-204ENST00000469054 DPM2O94777 84 aa7.57□□□□□ -1.2
VPS13D-204ENST00000469054 IGKCP01834 107 aa7.57□□□□□ -1.2
VPS13D-204ENST00000469054 PLNP26678 52 aa7.57□□□□□ -1.2
VPS13D-204ENST00000469054 Q6ZRP5 223 aa7.57□□□□□ -1.2
VPS13D-204ENST00000469054 STPG4Q8N801 248 aa7.57□□□□□ -1.2
VPS13D-204ENST00000469054 PMCHL2Q9BQD1 86 aa7.57□□□□□ -1.2
VPS13D-204ENST00000469054 PLAC8Q9NZF1 115 aa7.57□□□□□ -1.2
VPS13D-204ENST00000469054 NDUFC2-KCTD14E9PQ53 114 aa7.56□□□□□ -1.2
VPS13D-204ENST00000469054 GAGE2EQ4V326 116 aa7.56□□□□□ -1.2
VPS13D-204ENST00000469054 PET117Q6UWS5 81 aa7.56□□□□□ -1.2
VPS13D-204ENST00000469054 GAGE2DQ9UEU5 116 aa7.56□□□□□ -1.2
VPS13D-204ENST00000469054 EPM2AB3EWF7 344 aa7.55□□□□□ -1.2
VPS13D-204ENST00000469054 S100A6P06703 90 aa7.55□□□□□ -1.2
VPS13D-204ENST00000469054 C3orf79P0CE67 100 aa7.55□□□□□ -1.2
VPS13D-204ENST00000469054 A0A1W2PNN7 141 aa7.54□□□□□ -1.2
VPS13D-204ENST00000469054 Q5VSD8 79 aa7.54□□□□□ -1.2
VPS13D-204ENST00000469054 LINC01545Q5VT33 79 aa7.54□□□□□ -1.2
VPS13D-204ENST00000469054 KRTDAPP60985 99 aa7.53□□□□□ -1.2
VPS13D-204ENST00000469054 HERVK_113P61574 105 aa7.53□□□□□ -1.2
VPS13D-204ENST00000469054 SFTA2Q6UW10 78 aa7.53□□□□□ -1.2
VPS13D-204ENST00000469054 HIST3H2BBQ8N257 126 aa7.53□□□□□ -1.2
VPS13D-204ENST00000469054 ZNF625Q96I27 306 aaPredicted RBP7.53□□□□□ -1.2
VPS13D-204ENST00000469054 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
VPS13D-204ENST00000469054 S100A2P29034 98 aa7.52□□□□□ -1.21
VPS13D-204ENST00000469054 LEPROTO15243 131 aa7.51□□□□□ -1.21
VPS13D-204ENST00000469054 SNRPEP62304 92 aaKnown RBP7.51□□□□□ -1.21
VPS13D-204ENST00000469054 C9orf129Q5T035 196 aaKnown RBP7.51□□□□□ -1.21
VPS13D-204ENST00000469054 PLEKHB2Q96CS7 222 aa7.51□□□□□ -1.21
VPS13D-204ENST00000469054 HIST1H2BLQ99880 126 aa7.51□□□□□ -1.21
VPS13D-204ENST00000469054 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
VPS13D-204ENST00000469054 C20orf202A1L168 122 aa7.5□□□□□ -1.21
VPS13D-204ENST00000469054 PLA2G1BP04054 148 aaKnown RBP7.5□□□□□ -1.21
VPS13D-204ENST00000469054 XAGE1AQ9HD64 81 aa7.5□□□□□ -1.21
VPS13D-204ENST00000469054 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
VPS13D-204ENST00000469054 FAM168BA1KXE4 195 aa7.49□□□□□ -1.21
VPS13D-204ENST00000469054 C5orf52A6NGY3 159 aa7.49□□□□□ -1.21
VPS13D-204ENST00000469054 PFN2P35080 140 aa7.49□□□□□ -1.21
VPS13D-204ENST00000469054 TSPEAR-AS2P59090 65 aa7.49□□□□□ -1.21
VPS13D-204ENST00000469054 COX17Q14061 63 aa7.49□□□□□ -1.21
VPS13D-204ENST00000469054 C7orf33Q8WU49 177 aa7.49□□□□□ -1.21
VPS13D-204ENST00000469054 NDUFA12Q9UI09 145 aa7.49□□□□□ -1.21
VPS13D-204ENST00000469054 MYMXA0A1B0GTQ4 84 aa7.48□□□□□ -1.21
VPS13D-204ENST00000469054 E9PLD3 99 aa7.48□□□□□ -1.21
VPS13D-204ENST00000469054 J3QQQ9 107 aa7.48□□□□□ -1.21
VPS13D-204ENST00000469054 RPL37AP61513 92 aaKnown RBP7.48□□□□□ -1.21
VPS13D-204ENST00000469054 HERV-K104P63124 156 aa7.48□□□□□ -1.21
VPS13D-204ENST00000469054 LGALS3P17931 250 aaKnown RBP7.47□□□□□ -1.21
VPS13D-204ENST00000469054 FAM19A5Q7Z5A7 132 aaPredicted RBP7.47□□□□□ -1.21
VPS13D-204ENST00000469054 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
VPS13D-204ENST00000469054 LINC00587B1AMM8 73 aa7.46□□□□□ -1.22
VPS13D-204ENST00000469054 NMUP48645 174 aa7.46□□□□□ -1.22
VPS13D-204ENST00000469054 AKR1D1P51857 326 aa7.46□□□□□ -1.22
VPS13D-204ENST00000469054 LINC00158P58513 81 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms