RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 GAGE2EQ4V326 116 aa10.88□□□□□ -0.67
CLDN11-202ENST00000468358 Q8IZM0 81 aa10.88□□□□□ -0.67
CLDN11-202ENST00000468358 GAGE2DQ9UEU5 116 aa10.88□□□□□ -0.67
CLDN11-202ENST00000468358 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
CLDN11-202ENST00000468358 MYCBP2O75592 4640 aa10.87□□□□□ -0.67
CLDN11-202ENST00000468358 A0A1W2PNN7 141 aa10.86□□□□□ -0.67
CLDN11-202ENST00000468358 ATP5LO75964 103 aa10.86□□□□□ -0.67
CLDN11-202ENST00000468358 HNRNPA3P51991 378 aaKnown RBP10.86□□□□□ -0.67
CLDN11-202ENST00000468358 Q6ZRP5 223 aa10.86□□□□□ -0.67
CLDN11-202ENST00000468358 SMIM1B2RUZ4 78 aa10.85□□□□□ -0.67
CLDN11-202ENST00000468358 SPINK8P0C7L1 97 aa10.85□□□□□ -0.67
CLDN11-202ENST00000468358 TLX1NBP0CAT3 122 aa10.85□□□□□ -0.67
CLDN11-202ENST00000468358 BAGE3Q86Y29 109 aa10.85□□□□□ -0.67
CLDN11-202ENST00000468358 H3BRM9 83 aa10.84□□□□□ -0.67
CLDN11-202ENST00000468358 TRGC2P03986 189 aa10.84□□□□□ -0.67
CLDN11-202ENST00000468358 PDZD11Q5EBL8 140 aa10.84□□□□□ -0.67
CLDN11-202ENST00000468358 COX7B2Q8TF08 81 aa10.84□□□□□ -0.67
CLDN11-202ENST00000468358 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
CLDN11-202ENST00000468358 IGLV5-45A0A087WSX0 123 aa10.83□□□□□ -0.68
CLDN11-202ENST00000468358 NDUFC2-KCTD14E9PQ53 114 aa10.83□□□□□ -0.68
CLDN11-202ENST00000468358 CXCL5P42830 114 aa10.83□□□□□ -0.68
CLDN11-202ENST00000468358 PRR3P79522 188 aaKnown RBP10.83□□□□□ -0.68
CLDN11-202ENST00000468358 F8VRH5 84 aa10.82□□□□□ -0.68
CLDN11-202ENST00000468358 HSBP1O75506 76 aa10.82□□□□□ -0.68
CLDN11-202ENST00000468358 FAM19A5Q7Z5A7 132 aaPredicted RBP10.82□□□□□ -0.68
CLDN11-202ENST00000468358 FAM168BA1KXE4 195 aa10.81□□□□□ -0.68
CLDN11-202ENST00000468358 KRTAP29-1A8MX34 341 aaPredicted RBP10.81□□□□□ -0.68
CLDN11-202ENST00000468358 IGLC3P0DOY3 106 aa10.81□□□□□ -0.68
CLDN11-202ENST00000468358 PHF5AQ7RTV0 110 aaKnown RBP10.81□□□□□ -0.68
CLDN11-202ENST00000468358 OXTP01178 125 aa10.78□□□□□ -0.68
CLDN11-202ENST00000468358 ZNF22P17026 224 aaPredicted RBP10.78□□□□□ -0.68
CLDN11-202ENST00000468358 FAM19A2Q8N3H0 131 aa10.78□□□□□ -0.68
CLDN11-202ENST00000468358 IFI27L1Q96BM0 104 aa10.78□□□□□ -0.68
CLDN11-202ENST00000468358 CHTOPQ9Y3Y2 248 aaKnown RBP10.78□□□□□ -0.68
CLDN11-202ENST00000468358 TMEM170BQ5T4T1 132 aa10.77□□□□□ -0.69
CLDN11-202ENST00000468358 C11orf86A6NJI1 115 aa10.76□□□□□ -0.69
CLDN11-202ENST00000468358 COLCA2A8K830 154 aa10.76□□□□□ -0.69
CLDN11-202ENST00000468358 M0QXV9 152 aa10.76□□□□□ -0.69
CLDN11-202ENST00000468358 C9orf129Q5T035 196 aaKnown RBP10.76□□□□□ -0.69
CLDN11-202ENST00000468358 XAGE1AQ9HD64 81 aa10.76□□□□□ -0.69
CLDN11-202ENST00000468358 SERF1AO75920 110 aa10.75□□□□□ -0.69
CLDN11-202ENST00000468358 PKHD1L1Q86WI1 4243 aa10.74□□□□□ -0.69
CLDN11-202ENST00000468358 H0Y8G0 127 aa10.74□□□□□ -0.69
CLDN11-202ENST00000468358 SCO1O75880 301 aa10.74□□□□□ -0.69
CLDN11-202ENST00000468358 UBE2BP63146 152 aa10.74□□□□□ -0.69
CLDN11-202ENST00000468358 PSORS1C2Q9UIG4 136 aa10.74□□□□□ -0.69
CLDN11-202ENST00000468358 C1orf137Q5JT78 98 aa10.73□□□□□ -0.69
CLDN11-202ENST00000468358 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
CLDN11-202ENST00000468358 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
CLDN11-202ENST00000468358 LEPROTL1O95214 131 aa10.72□□□□□ -0.69
CLDN11-202ENST00000468358 LRP1Q07954 4544 aaKnown RBP10.72□□□□□ -0.69
CLDN11-202ENST00000468358 SPINK6Q6UWN8 80 aa10.7□□□□□ -0.7
CLDN11-202ENST00000468358 KRTAP7-1Q8IUC3 87 aa10.7□□□□□ -0.7
CLDN11-202ENST00000468358 PFN2P35080 140 aa10.69□□□□□ -0.7
CLDN11-202ENST00000468358 LINC00310P59036 64 aa10.69□□□□□ -0.7
CLDN11-202ENST00000468358 SERTAD4-AS1Q5TG53 156 aa10.69□□□□□ -0.7
CLDN11-202ENST00000468358 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
CLDN11-202ENST00000468358 FABP4P15090 132 aa10.68□□□□□ -0.7
CLDN11-202ENST00000468358 ZNF625Q96I27 306 aaPredicted RBP10.68□□□□□ -0.7
CLDN11-202ENST00000468358 HERC1Q15751 4861 aa10.68□□□□□ -0.7
CLDN11-202ENST00000468358 NUPR1O60356 82 aa10.67□□□□□ -0.7
CLDN11-202ENST00000468358 HSPB8Q9UJY1 196 aa10.67□□□□□ -0.7
CLDN11-202ENST00000468358 C22orf24Q9Y442 160 aa10.67□□□□□ -0.7
CLDN11-202ENST00000468358 REG3GQ6UW15 175 aa10.66□□□□□ -0.7
CLDN11-202ENST00000468358 KRTAP11-1Q8IUC1 163 aa10.66□□□□□ -0.7
CLDN11-202ENST00000468358 TMEM223A0PJW6 202 aa10.65□□□□□ -0.7
CLDN11-202ENST00000468358 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLDN11-202ENST00000468358 ODF1Q14990 250 aa10.65□□□□□ -0.7
CLDN11-202ENST00000468358 LBHQ53QV2 105 aaPredicted RBP10.65□□□□□ -0.7
CLDN11-202ENST00000468358 SFTA2Q6UW10 78 aa10.65□□□□□ -0.7
CLDN11-202ENST00000468358 ERG28Q9UKR5 140 aa10.65□□□□□ -0.7
CLDN11-202ENST00000468358 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
CLDN11-202ENST00000468358 MRPL55Q7Z7F7 128 aaKnown RBP10.63□□□□□ -0.71
CLDN11-202ENST00000468358 NKAPP1Q8N9T2 125 aa10.63□□□□□ -0.71
CLDN11-202ENST00000468358 HIST1H2BKO60814 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST1H2BJP06899 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST1H2BOP23527 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST1H2BBP33778 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST1H2BDP58876 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST1H2BCP62807 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST2H2BEQ16778 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST1H2BHQ93079 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST1H2BNQ99877 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 HIST1H2BMQ99879 126 aa10.62□□□□□ -0.71
CLDN11-202ENST00000468358 COX17Q14061 63 aa10.61□□□□□ -0.71
CLDN11-202ENST00000468358 TP73-AS1Q9UF72 201 aa10.61□□□□□ -0.71
CLDN11-202ENST00000468358 GAGE10A6NGK3 116 aa10.6□□□□□ -0.71
CLDN11-202ENST00000468358 PLNP26678 52 aa10.6□□□□□ -0.71
CLDN11-202ENST00000468358 LINC00158P58513 81 aa10.6□□□□□ -0.71
CLDN11-202ENST00000468358 PMCHL2Q9BQD1 86 aa10.6□□□□□ -0.71
CLDN11-202ENST00000468358 MAP1LC3CQ9BXW4 147 aa10.6□□□□□ -0.71
CLDN11-202ENST00000468358 PLA2G2DQ9UNK4 145 aa10.6□□□□□ -0.71
CLDN11-202ENST00000468358 A0A0U1RRA0 63 aa10.59□□□□□ -0.71
CLDN11-202ENST00000468358 DPM2O94777 84 aa10.59□□□□□ -0.71
CLDN11-202ENST00000468358 MT1HL1P0DM35 61 aa10.59□□□□□ -0.71
CLDN11-202ENST00000468358 DIRC1Q969H9 104 aa10.59□□□□□ -0.71
CLDN11-202ENST00000468358 LINC01600Q96MT4 127 aa10.59□□□□□ -0.71
CLDN11-202ENST00000468358 SND1-IT1Q9HBX3 110 aa10.59□□□□□ -0.71
CLDN11-202ENST00000468358 RPL37AP8A6NKH3 93 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms