RNA–Protein interactions for RNA: ENST00000467628.1

SATB1-211, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-211ENST00000467628 CORTO00230 105 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 SPINK4O60575 86 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 SPRR2AP35326 72 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 Q0VG73 95 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 LCN9Q8WX39 176 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 C2orf88Q9BSF0 95 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 IQSEC2Q5JU85 1478 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 PSME4Q14997 1843 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 SETBP1Q9Y6X0 1596 aa-0.36□□□□□ -2.47
SATB1-211ENST00000467628 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.37□□□□□ -2.47
SATB1-211ENST00000467628 KNL1Q8NG31 2342 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 MAPKBP1O60336 1514 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 FAT3Q8TDW7 4589 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 NALCNQ8IZF0 1738 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 FAM24AA6NFZ4 105 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 FAM223BA6NKX1 122 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 COX6CP09669 75 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 SAA2P0DJI9 122 aaPredicted RBP-0.37□□□□□ -2.47
SATB1-211ENST00000467628 GNG4P50150 75 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 GNG11P61952 73 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 KLK9Q2XQG4 91 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 FAIMQ9NVQ4 179 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 PRO1854Q9UHT4 67 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 TNRC18O15417 2968 aaPredicted RBP-0.37□□□□□ -2.47
SATB1-211ENST00000467628 ZZEF1O43149 2961 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 HIVEP1P15822 2718 aa-0.37□□□□□ -2.47
SATB1-211ENST00000467628 PKHD1L1Q86WI1 4243 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 SONP18583 2426 aaKnown RBP-0.38□□□□□ -2.47
SATB1-211ENST00000467628 NAP1L6A6NFF2 107 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 UBA52P62987 128 aaKnown RBP-0.38□□□□□ -2.47
SATB1-211ENST00000467628 DEFB105AQ8NG35 78 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 USMG5Q96IX5 58 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 PRO1933Q9H354 126 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 PZPP20742 1482 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 PLEKHH2Q8IVE3 1493 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 FASNP49327 2511 aaKnown RBP-0.38□□□□□ -2.47
SATB1-211ENST00000467628 SPG11Q96JI7 2443 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 MYH7P12883 1935 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 TSC2P49815 1807 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 ARHGAP5Q13017 1502 aa-0.38□□□□□ -2.47
SATB1-211ENST00000467628 NBASA2RRP1 2371 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 KDM5AP29375 1690 aaKnown RBP-0.39□□□□□ -2.47
SATB1-211ENST00000467628 CUL7Q14999 1698 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 NKTRP30414 1462 aaKnown RBP-0.39□□□□□ -2.47
SATB1-211ENST00000467628 A0A1B0GWA3 101 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 LINC00587B1AMM8 73 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 LOC730098B7Z3J9 87 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 COX8AP10176 69 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 SPRR2EP22531 72 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 PPP3R1P63098 170 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 MANBALQ9NQG1 85 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 MUC17Q685J3 4493 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 USP9YO00507 2555 aaPredicted RBP-0.39□□□□□ -2.47
SATB1-211ENST00000467628 BTAF1O14981 1849 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 SLIT1O75093 1534 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 ABCC5O15440 1437 aa-0.39□□□□□ -2.47
SATB1-211ENST00000467628 MYO18BQ8IUG5 2567 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 NRKQ7Z2Y5 1582 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 TEP1Q99973 2627 aaKnown RBP-0.4□□□□□ -2.47
SATB1-211ENST00000467628 A0A0G2JMZ2 1700 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 SPHKAPQ2M3C7 1700 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 UBR4Q5T4S7 5183 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 XRN1Q8IZH2 1706 aaKnown RBP-0.4□□□□□ -2.47
SATB1-211ENST00000467628 TMEM262E9PQX1 116 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 SNAPC5O75971 98 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 SVBPQ8N300 66 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 TMEM203Q969S6 136 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 C12orf57Q99622 126 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 CGREF1Q99674 301 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 USH2AO75445 5202 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 EDC4Q6P2E9 1401 aaKnown RBP-0.4□□□□□ -2.47
SATB1-211ENST00000467628 SCN7AQ01118 1682 aa-0.4□□□□□ -2.47
SATB1-211ENST00000467628 ANKRD11Q6UB99 2663 aaPredicted RBP-0.41□□□□□ -2.47
SATB1-211ENST00000467628 SPTBN4Q9H254 2564 aa-0.41□□□□□ -2.47
SATB1-211ENST00000467628 CUBNO60494 3623 aa-0.41□□□□□ -2.47
SATB1-211ENST00000467628 DMXL1Q9Y485 3027 aa-0.41□□□□□ -2.47
SATB1-211ENST00000467628 PRDM15P57071 1507 aaPredicted RBP-0.41□□□□□ -2.48
SATB1-211ENST00000467628 hADV29S1A0JD25 119 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 CPSF4LA6NMK7 179 aaKnown RBP-0.41□□□□□ -2.48
SATB1-211ENST00000467628 H7BZZ5 65 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 TRAPPC2P0DI81 140 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 TRAPPC2BP0DI82 140 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 KRTAP19-8Q3LI54 63 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 SFTA2Q6UW10 78 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 FDCSPQ8NFU4 85 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 APLNQ9ULZ1 77 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 KALRNO60229 2985 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 DSPP15924 2871 aaKnown RBP-0.41□□□□□ -2.48
SATB1-211ENST00000467628 NLRP1Q9C000 1473 aa-0.41□□□□□ -2.48
SATB1-211ENST00000467628 APOBP04114 4563 aaKnown RBP-0.42□□□□□ -2.48
SATB1-211ENST00000467628 VPS13BQ7Z7G8 4022 aa-0.42□□□□□ -2.48
SATB1-211ENST00000467628 TRBV25-1A0A075B6N4 114 aa-0.42□□□□□ -2.48
SATB1-211ENST00000467628 A0A087WVE0 104 aa-0.42□□□□□ -2.48
SATB1-211ENST00000467628 A0A1B0GU69 56 aa-0.42□□□□□ -2.48
SATB1-211ENST00000467628 C7orf77A4D0Y5 90 aa-0.42□□□□□ -2.48
SATB1-211ENST00000467628 KRTDAPP60985 99 aa-0.42□□□□□ -2.48
SATB1-211ENST00000467628 SEC11AP67812 179 aa-0.42□□□□□ -2.48
SATB1-211ENST00000467628 HSD52Q0P140 79 aa-0.42□□□□□ -2.48
SATB1-211ENST00000467628 H1FX-AS1Q4G0G2 97 aa-0.42□□□□□ -2.48
SATB1-211ENST00000467628 C6orf201Q7Z4U5 140 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms