RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.53
PDE6B-206ENST00000467152 C6orf48Q9UBA6 75 aa11.71□□□□□ -0.53
PDE6B-206ENST00000467152 IGLV5-45A0A087WSX0 123 aa11.7□□□□□ -0.54
PDE6B-206ENST00000467152 C2orf82Q6UX34 121 aa11.7□□□□□ -0.54
PDE6B-206ENST00000467152 PLA2G2DQ9UNK4 145 aa11.7□□□□□ -0.54
PDE6B-206ENST00000467152 LINC00469Q8N7U9 141 aa11.69□□□□□ -0.54
PDE6B-206ENST00000467152 ATP5LO75964 103 aa11.68□□□□□ -0.54
PDE6B-206ENST00000467152 NDUFA6P56556 154 aa11.68□□□□□ -0.54
PDE6B-206ENST00000467152 TOMM7Q9P0U1 55 aa11.68□□□□□ -0.54
PDE6B-206ENST00000467152 SCO1O75880 301 aa11.67□□□□□ -0.54
PDE6B-206ENST00000467152 PRSS2P07478 247 aa11.67□□□□□ -0.54
PDE6B-206ENST00000467152 TLX1NBP0CAT3 122 aa11.67□□□□□ -0.54
PDE6B-206ENST00000467152 RPL37AP61513 92 aaKnown RBP11.67□□□□□ -0.54
PDE6B-206ENST00000467152 C6orf226Q5I0X4 101 aa11.67□□□□□ -0.54
PDE6B-206ENST00000467152 BAGE3Q86Y29 109 aa11.67□□□□□ -0.54
PDE6B-206ENST00000467152 Q8IZM0 81 aa11.67□□□□□ -0.54
PDE6B-206ENST00000467152 PACRGQ96M98 296 aaPredicted RBP11.67□□□□□ -0.54
PDE6B-206ENST00000467152 TRBV30A0A0K0K1B3 111 aa11.66□□□□□ -0.54
PDE6B-206ENST00000467152 SMIM1B2RUZ4 78 aa11.66□□□□□ -0.54
PDE6B-206ENST00000467152 IGLC3P0DOY3 106 aa11.66□□□□□ -0.54
PDE6B-206ENST00000467152 RPL18AQ02543 176 aaKnown RBP11.66□□□□□ -0.54
PDE6B-206ENST00000467152 A0A1W2PNN7 141 aa11.65□□□□□ -0.54
PDE6B-206ENST00000467152 Q6ZRP5 223 aa11.64□□□□□ -0.55
PDE6B-206ENST00000467152 LINC00310P59036 64 aa11.63□□□□□ -0.55
PDE6B-206ENST00000467152 CKS1BP61024 79 aa11.63□□□□□ -0.55
PDE6B-206ENST00000467152 C9orf116Q5BN46 136 aaPredicted RBP11.63□□□□□ -0.55
PDE6B-206ENST00000467152 FAM19A2Q8N3H0 131 aa11.63□□□□□ -0.55
PDE6B-206ENST00000467152 HSBP1O75506 76 aa11.62□□□□□ -0.55
PDE6B-206ENST00000467152 SPINK8P0C7L1 97 aa11.62□□□□□ -0.55
PDE6B-206ENST00000467152 IFI27L1Q96BM0 104 aa11.62□□□□□ -0.55
PDE6B-206ENST00000467152 SERF1AO75920 110 aa11.61□□□□□ -0.55
PDE6B-206ENST00000467152 ZNF22P17026 224 aaPredicted RBP11.61□□□□□ -0.55
PDE6B-206ENST00000467152 COX7B2Q8TF08 81 aa11.61□□□□□ -0.55
PDE6B-206ENST00000467152 C7orf33Q8WU49 177 aa11.61□□□□□ -0.55
PDE6B-206ENST00000467152 H3BRM9 83 aa11.6□□□□□ -0.55
PDE6B-206ENST00000467152 NUPR1O60356 82 aa11.6□□□□□ -0.55
PDE6B-206ENST00000467152 GAGE2EQ4V326 116 aa11.6□□□□□ -0.55
PDE6B-206ENST00000467152 GAGE2DQ9UEU5 116 aa11.6□□□□□ -0.55
PDE6B-206ENST00000467152 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
PDE6B-206ENST00000467152 NDUFC2-KCTD14E9PQ53 114 aa11.59□□□□□ -0.55
PDE6B-206ENST00000467152 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
PDE6B-206ENST00000467152 TRAV12-1A0A0B4J245 112 aa11.58□□□□□ -0.56
PDE6B-206ENST00000467152 IGLV5-39A0A0G2JS06 123 aa11.58□□□□□ -0.56
PDE6B-206ENST00000467152 F8VRH5 84 aa11.58□□□□□ -0.56
PDE6B-206ENST00000467152 CXCL5P42830 114 aa11.58□□□□□ -0.56
PDE6B-206ENST00000467152 CHTOPQ9Y3Y2 248 aaKnown RBP11.58□□□□□ -0.56
PDE6B-206ENST00000467152 FAM168BA1KXE4 195 aa11.56□□□□□ -0.56
PDE6B-206ENST00000467152 C9orf129Q5T035 196 aaKnown RBP11.55□□□□□ -0.56
PDE6B-206ENST00000467152 KRTAP7-1Q8IUC3 87 aa11.55□□□□□ -0.56
PDE6B-206ENST00000467152 TMEM170BQ5T4T1 132 aa11.54□□□□□ -0.56
PDE6B-206ENST00000467152 HIST1H2BKO60814 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 LEPROTL1O95214 131 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST1H2BJP06899 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST1H2BOP23527 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST1H2BBP33778 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST1H2BDP58876 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST1H2BCP62807 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 PRR3P79522 188 aaKnown RBP11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST2H2BEQ16778 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.53□□□□□ -0.56
PDE6B-206ENST00000467152 PHF5AQ7RTV0 110 aaKnown RBP11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST1H2BHQ93079 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST1H2BNQ99877 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 HIST1H2BMQ99879 126 aa11.53□□□□□ -0.56
PDE6B-206ENST00000467152 MT1HL1P0DM35 61 aa11.51□□□□□ -0.57
PDE6B-206ENST00000467152 FABP4P15090 132 aa11.5□□□□□ -0.57
PDE6B-206ENST00000467152 FAM19A5Q7Z5A7 132 aaPredicted RBP11.5□□□□□ -0.57
PDE6B-206ENST00000467152 TMEM223A0PJW6 202 aa11.49□□□□□ -0.57
PDE6B-206ENST00000467152 ODF1Q14990 250 aa11.49□□□□□ -0.57
PDE6B-206ENST00000467152 XAGE1AQ9HD64 81 aa11.49□□□□□ -0.57
PDE6B-206ENST00000467152 HSPB8Q9UJY1 196 aa11.49□□□□□ -0.57
PDE6B-206ENST00000467152 H0Y8G0 127 aa11.47□□□□□ -0.57
PDE6B-206ENST00000467152 KRTAP11-1Q8IUC1 163 aa11.47□□□□□ -0.57
PDE6B-206ENST00000467152 PSORS1C2Q9UIG4 136 aa11.47□□□□□ -0.57
PDE6B-206ENST00000467152 S100A1P23297 94 aa11.45□□□□□ -0.58
PDE6B-206ENST00000467152 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDE6B-206ENST00000467152 M0QXV9 152 aa11.44□□□□□ -0.58
PDE6B-206ENST00000467152 ZNF625Q96I27 306 aaPredicted RBP11.44□□□□□ -0.58
PDE6B-206ENST00000467152 C22orf24Q9Y442 160 aa11.43□□□□□ -0.58
PDE6B-206ENST00000467152 PFN2P35080 140 aa11.42□□□□□ -0.58
PDE6B-206ENST00000467152 ERG28Q9UKR5 140 aa11.42□□□□□ -0.58
PDE6B-206ENST00000467152 TNXBP22105 4242 aa11.42□□□□□ -0.58
PDE6B-206ENST00000467152 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
PDE6B-206ENST00000467152 SFTA2Q6UW10 78 aa11.41□□□□□ -0.58
PDE6B-206ENST00000467152 MAP1LC3CQ9BXW4 147 aa11.41□□□□□ -0.58
PDE6B-206ENST00000467152 ATP6V1G1O75348 118 aa11.4□□□□□ -0.58
PDE6B-206ENST00000467152 COX17Q14061 63 aa11.4□□□□□ -0.58
PDE6B-206ENST00000467152 C1orf137Q5JT78 98 aa11.4□□□□□ -0.58
PDE6B-206ENST00000467152 SPINK6Q6UWN8 80 aa11.4□□□□□ -0.58
PDE6B-206ENST00000467152 PMCHL2Q9BQD1 86 aa11.4□□□□□ -0.58
PDE6B-206ENST00000467152 DPM2O94777 84 aa11.39□□□□□ -0.59
PDE6B-206ENST00000467152 PLNP26678 52 aa11.39□□□□□ -0.59
PDE6B-206ENST00000467152 UBE2BP63146 152 aa11.38□□□□□ -0.59
PDE6B-206ENST00000467152 LBHQ53QV2 105 aaPredicted RBP11.38□□□□□ -0.59
PDE6B-206ENST00000467152 TP73-AS1Q9UF72 201 aa11.38□□□□□ -0.59
PDE6B-206ENST00000467152 SND1-IT1Q9HBX3 110 aa11.37□□□□□ -0.59
PDE6B-206ENST00000467152 IGLV5-37A0A075B6J1 123 aa11.36□□□□□ -0.59
PDE6B-206ENST00000467152 SYS1-DBNDD2H3BUS1 97 aa11.36□□□□□ -0.59
PDE6B-206ENST00000467152 IGKCP01834 107 aa11.36□□□□□ -0.59
PDE6B-206ENST00000467152 LRP2P98164 4655 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms