RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 GEMIN7Q9H840 131 aaKnown RBP5.99□□□□□ -1.45
SDCCAG3-208ENST00000466579 IGLC3P0DOY3 106 aa5.98□□□□□ -1.45
SDCCAG3-208ENST00000466579 PMCHL1Q16048 86 aa5.98□□□□□ -1.45
SDCCAG3-208ENST00000466579 UNQ6190/PRO20217Q6UXQ8 127 aa5.98□□□□□ -1.45
SDCCAG3-208ENST00000466579 Q8IZM0 81 aa5.98□□□□□ -1.45
SDCCAG3-208ENST00000466579 C6orf48Q9UBA6 75 aa5.98□□□□□ -1.45
SDCCAG3-208ENST00000466579 IGKV2-24A0A0C4DH68 120 aa5.97□□□□□ -1.45
SDCCAG3-208ENST00000466579 TRBV30A0A0K0K1B3 111 aa5.97□□□□□ -1.45
SDCCAG3-208ENST00000466579 SMIM1B2RUZ4 78 aa5.97□□□□□ -1.45
SDCCAG3-208ENST00000466579 LINC00310P59036 64 aa5.97□□□□□ -1.45
SDCCAG3-208ENST00000466579 MAJINQ3KP22 176 aa5.97□□□□□ -1.45
SDCCAG3-208ENST00000466579 MYCBP2O75592 4640 aa5.97□□□□□ -1.45
SDCCAG3-208ENST00000466579 INAFM2P0DMQ5 153 aa5.96□□□□□ -1.46
SDCCAG3-208ENST00000466579 LINC00469Q8N7U9 141 aa5.96□□□□□ -1.46
SDCCAG3-208ENST00000466579 STPG4Q8N801 248 aa5.96□□□□□ -1.46
SDCCAG3-208ENST00000466579 TRAV12-1A0A0B4J245 112 aa5.95□□□□□ -1.46
SDCCAG3-208ENST00000466579 SCO1O75880 301 aa5.95□□□□□ -1.46
SDCCAG3-208ENST00000466579 CXCL5P42830 114 aa5.95□□□□□ -1.46
SDCCAG3-208ENST00000466579 C2orf82Q6UX34 121 aa5.95□□□□□ -1.46
SDCCAG3-208ENST00000466579 BAGE3Q86Y29 109 aa5.95□□□□□ -1.46
SDCCAG3-208ENST00000466579 PACRGQ96M98 296 aaPredicted RBP5.95□□□□□ -1.46
SDCCAG3-208ENST00000466579 IGLV5-39A0A0G2JS06 123 aa5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 HSBP1O75506 76 aa5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 SERF1AO75920 110 aa5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 PRSS2P07478 247 aa5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 ZNF22P17026 224 aaPredicted RBP5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 RPL37AP61513 92 aaKnown RBP5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 GAGE2BQ13066 116 aa5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 C6orf226Q5I0X4 101 aa5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 Q6ZRP5 223 aa5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 IFI27L1Q96BM0 104 aa5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 DPH3Q96FX2 82 aa5.94□□□□□ -1.46
SDCCAG3-208ENST00000466579 A0A1W2PNN7 141 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 C11orf86A6NJI1 115 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 NDUFC2-KCTD14E9PQ53 114 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 F8VRH5 84 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 H3BRM9 83 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 CKS1BP61024 79 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 RPL18AQ02543 176 aaKnown RBP5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 ODF1Q14990 250 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 FAM19A2Q8N3H0 131 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 COX7B2Q8TF08 81 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 TOMM7Q9P0U1 55 aa5.93□□□□□ -1.46
SDCCAG3-208ENST00000466579 FAT3Q8TDW7 4589 aa5.92□□□□□ -1.46
SDCCAG3-208ENST00000466579 FLG2Q5D862 2391 aaPredicted RBP5.92□□□□□ -1.46
SDCCAG3-208ENST00000466579 NUPR1O60356 82 aa5.92□□□□□ -1.46
SDCCAG3-208ENST00000466579 SPINK8P0C7L1 97 aa5.92□□□□□ -1.46
SDCCAG3-208ENST00000466579 NDUFA6P56556 154 aa5.92□□□□□ -1.46
SDCCAG3-208ENST00000466579 C9orf116Q5BN46 136 aaPredicted RBP5.92□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST1H2BKO60814 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST1H2BJP06899 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST1H2BOP23527 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST1H2BBP33778 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST1H2BDP58876 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST1H2BCP62807 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST2H2BEQ16778 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 C7orf33Q8WU49 177 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST1H2BHQ93079 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST1H2BNQ99877 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 HIST1H2BMQ99879 126 aa5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 CHTOPQ9Y3Y2 248 aaKnown RBP5.91□□□□□ -1.46
SDCCAG3-208ENST00000466579 LEPROTL1O95214 131 aa5.9□□□□□ -1.46
SDCCAG3-208ENST00000466579 HNRNPA3P51991 378 aaKnown RBP5.9□□□□□ -1.46
SDCCAG3-208ENST00000466579 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.46
SDCCAG3-208ENST00000466579 KRTAP7-1Q8IUC3 87 aa5.9□□□□□ -1.46
SDCCAG3-208ENST00000466579 LRP1Q07954 4544 aaKnown RBP5.89□□□□□ -1.47
SDCCAG3-208ENST00000466579 TMEM223A0PJW6 202 aa5.89□□□□□ -1.47
SDCCAG3-208ENST00000466579 S100A1P23297 94 aa5.89□□□□□ -1.47
SDCCAG3-208ENST00000466579 PRR3P79522 188 aaKnown RBP5.89□□□□□ -1.47
SDCCAG3-208ENST00000466579 GAGE2EQ4V326 116 aa5.89□□□□□ -1.47
SDCCAG3-208ENST00000466579 COA6Q5JTJ3 125 aaKnown RBP5.89□□□□□ -1.47
SDCCAG3-208ENST00000466579 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
SDCCAG3-208ENST00000466579 GAGE2DQ9UEU5 116 aa5.89□□□□□ -1.47
SDCCAG3-208ENST00000466579 HSPB8Q9UJY1 196 aa5.89□□□□□ -1.47
SDCCAG3-208ENST00000466579 FAM168BA1KXE4 195 aa5.88□□□□□ -1.47
SDCCAG3-208ENST00000466579 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
SDCCAG3-208ENST00000466579 TMEM170BQ5T4T1 132 aa5.88□□□□□ -1.47
SDCCAG3-208ENST00000466579 SFTA2Q6UW10 78 aa5.88□□□□□ -1.47
SDCCAG3-208ENST00000466579 ZNF625Q96I27 306 aaPredicted RBP5.87□□□□□ -1.47
SDCCAG3-208ENST00000466579 HERC1Q15751 4861 aa5.86□□□□□ -1.47
SDCCAG3-208ENST00000466579 PHF5AQ7RTV0 110 aaKnown RBP5.86□□□□□ -1.47
SDCCAG3-208ENST00000466579 KRTAP4-12Q9BQ66 201 aa5.86□□□□□ -1.47
SDCCAG3-208ENST00000466579 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
SDCCAG3-208ENST00000466579 ATP6V1G1O75348 118 aa5.85□□□□□ -1.47
SDCCAG3-208ENST00000466579 OXTP01178 125 aa5.85□□□□□ -1.47
SDCCAG3-208ENST00000466579 FABP4P15090 132 aa5.85□□□□□ -1.47
SDCCAG3-208ENST00000466579 PLNP26678 52 aa5.85□□□□□ -1.47
SDCCAG3-208ENST00000466579 SRSF9Q13242 221 aaKnown RBP eCLIP5.85□□□□□ -1.47
SDCCAG3-208ENST00000466579 COX17Q14061 63 aa5.85□□□□□ -1.47
SDCCAG3-208ENST00000466579 FAM19A5Q7Z5A7 132 aaPredicted RBP5.85□□□□□ -1.47
SDCCAG3-208ENST00000466579 TP73-AS1Q9UF72 201 aa5.85□□□□□ -1.47
SDCCAG3-208ENST00000466579 PSORS1C2Q9UIG4 136 aa5.85□□□□□ -1.47
SDCCAG3-208ENST00000466579 IGLV5-37A0A075B6J1 123 aa5.84□□□□□ -1.47
SDCCAG3-208ENST00000466579 M0QXV9 152 aa5.84□□□□□ -1.47
SDCCAG3-208ENST00000466579 SERTAD4-AS1Q5TG53 156 aa5.84□□□□□ -1.47
SDCCAG3-208ENST00000466579 KRTAP11-1Q8IUC1 163 aa5.84□□□□□ -1.47
SDCCAG3-208ENST00000466579 MAP1LC3CQ9BXW4 147 aa5.84□□□□□ -1.47
SDCCAG3-208ENST00000466579 XAGE1AQ9HD64 81 aa5.84□□□□□ -1.47
SDCCAG3-208ENST00000466579 ERG28Q9UKR5 140 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms