RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 XKRY2A2RUG3 117 aa3.11□□□□□ -1.91
NCL-208ENST00000466274 C7orf77A4D0Y5 90 aa3.11□□□□□ -1.91
NCL-208ENST00000466274 SDHAF1A6NFY7 115 aa3.11□□□□□ -1.91
NCL-208ENST00000466274 RPL37AP8A6NKH3 93 aa3.11□□□□□ -1.91
NCL-208ENST00000466274 UPK1BO75841 260 aa3.11□□□□□ -1.91
NCL-208ENST00000466274 IGLC6P0CF74 106 aa3.11□□□□□ -1.91
NCL-208ENST00000466274 AKR1C3P42330 323 aa3.11□□□□□ -1.91
NCL-208ENST00000466274 GATD1Q8NB37 220 aa3.11□□□□□ -1.91
NCL-208ENST00000466274 RAB19A4D1S5 217 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 PET100P0DJ07 73 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 DEFA1P59665 94 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 SERF2P84101 59 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 IFITM3Q01628 133 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 Q5BKY6 102 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 Q6Q795 121 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 SMIM15Q7Z3B0 74 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 BAGE2Q86Y30 109 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 PLEKHB2Q96CS7 222 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 RPL39LQ96EH5 51 aaKnown RBP3.1□□□□□ -1.91
NCL-208ENST00000466274 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
NCL-208ENST00000466274 PSMG3Q9BT73 122 aaPredicted RBP3.1□□□□□ -1.91
NCL-208ENST00000466274 ZNF706Q9Y5V0 76 aaPredicted RBP3.1□□□□□ -1.91
NCL-208ENST00000466274 CCDC160A6NGH7 325 aa3.09□□□□□ -1.91
NCL-208ENST00000466274 INMT-MINDY4F8WBC2 141 aa3.09□□□□□ -1.91
NCL-208ENST00000466274 NOL3O60936 208 aaKnown RBP3.09□□□□□ -1.91
NCL-208ENST00000466274 IFNA1P01562 189 aa3.09□□□□□ -1.91
NCL-208ENST00000466274 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
NCL-208ENST00000466274 Q8N377 158 aa3.09□□□□□ -1.91
NCL-208ENST00000466274 LINC00469Q8N7U9 141 aa3.09□□□□□ -1.91
NCL-208ENST00000466274 GEMIN7Q9H840 131 aaKnown RBP3.09□□□□□ -1.91
NCL-208ENST00000466274 TGIF2-C20orf24A0A0A6YYL0 155 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 IGHV3OR16-9A0A0B4J2B5 98 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 CTXND1A0A1B0GTU2 59 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 FHITP49789 147 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 FOXA3P55318 350 aaPredicted RBP3.08□□□□□ -1.92
NCL-208ENST00000466274 RPL32P62910 135 aaKnown RBP3.08□□□□□ -1.92
NCL-208ENST00000466274 RPL7L1Q6DKI1 246 aaKnown RBP3.08□□□□□ -1.92
NCL-208ENST00000466274 FAM19A1Q7Z5A9 133 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 LINC01551Q86U37 167 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 CBLN2Q8IUK8 224 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 ST20Q9HBF5 79 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 XAGE1AQ9HD64 81 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 TMEM242Q9NWH2 141 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 TNFSF18Q9UNG2 199 aa3.08□□□□□ -1.92
NCL-208ENST00000466274 TRBV6-5A0A0K0K1A5 114 aa3.07□□□□□ -1.92
NCL-208ENST00000466274 FAM240BA0A1B0GVZ2 78 aa3.07□□□□□ -1.92
NCL-208ENST00000466274 FCER1GP30273 86 aa3.07□□□□□ -1.92
NCL-208ENST00000466274 CKS1BP61024 79 aa3.07□□□□□ -1.92
NCL-208ENST00000466274 KIAA0087Q14695 138 aa3.07□□□□□ -1.92
NCL-208ENST00000466274 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
NCL-208ENST00000466274 NKAPP1Q8N9T2 125 aa3.07□□□□□ -1.92
NCL-208ENST00000466274 FAM104AQ969W3 186 aa3.07□□□□□ -1.92
NCL-208ENST00000466274 RNASE7Q9H1E1 156 aaKnown RBP3.07□□□□□ -1.92
NCL-208ENST00000466274 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
NCL-208ENST00000466274 MAP1LC3B2A6NCE7 125 aa3.06□□□□□ -1.92
NCL-208ENST00000466274 PRLHP81277 87 aa3.06□□□□□ -1.92
NCL-208ENST00000466274 C2orf82Q6UX34 121 aa3.06□□□□□ -1.92
NCL-208ENST00000466274 SPRR4Q96PI1 79 aa3.06□□□□□ -1.92
NCL-208ENST00000466274 MAP1LC3BQ9GZQ8 125 aa3.06□□□□□ -1.92
NCL-208ENST00000466274 TRBV20OR9-2A0A075B6H5 130 aa3.05□□□□□ -1.92
NCL-208ENST00000466274 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
NCL-208ENST00000466274 SSBP3-AS1Q7Z2R9 100 aa3.05□□□□□ -1.92
NCL-208ENST00000466274 C9orf62Q8N4C0 152 aa3.05□□□□□ -1.92
NCL-208ENST00000466274 TIMM21Q9BVV7 248 aa3.05□□□□□ -1.92
NCL-208ENST00000466274 HIGD2AQ9BW72 106 aa3.05□□□□□ -1.92
NCL-208ENST00000466274 IGKV2-28A0A075B6P5 120 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 C9orf92A6NGG3 77 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 PFDN1O60925 122 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 IGKV2D-28P01615 120 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 RPL35P42766 123 aaKnown RBP3.04□□□□□ -1.92
NCL-208ENST00000466274 KRTAP10-10P60014 251 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 HBBP68871 147 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 C6orf226Q5I0X4 101 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 Q6ZUT4 128 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 LINC01561Q8N1V8 128 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 CNFNQ9BYD5 112 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
NCL-208ENST00000466274 A0A1B0GV50 99 aa3.03□□□□□ -1.92
NCL-208ENST00000466274 C20orf202A1L168 122 aa3.03□□□□□ -1.92
NCL-208ENST00000466274 SSNA1O43805 119 aa3.03□□□□□ -1.92
NCL-208ENST00000466274 MT2AP02795 61 aa3.03□□□□□ -1.92
NCL-208ENST00000466274 ENKURQ8TC29 256 aa3.03□□□□□ -1.92
NCL-208ENST00000466274 TMEM126AQ9H061 195 aa3.03□□□□□ -1.92
NCL-208ENST00000466274 BIN3Q9NQY0 253 aa3.03□□□□□ -1.92
NCL-208ENST00000466274 F8VRH5 84 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 TCAPO15273 167 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 PPP1R17O96001 155 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 IGLV6-57P01721 117 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 LGALS3P17931 250 aaKnown RBP3.02□□□□□ -1.93
NCL-208ENST00000466274 POLR2KP53803 58 aaKnown RBP3.02□□□□□ -1.93
NCL-208ENST00000466274 CCL20P78556 96 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 CENPWQ5EE01 88 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 AKR1C8PQ5T2L2 129 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 FAM231DQ6ZW35 169 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 TMUB2Q71RG4 321 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 C11orf52Q96A22 123 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 TOMM7Q9P0U1 55 aa3.02□□□□□ -1.93
NCL-208ENST00000466274 RPL37P61927 97 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms