RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.11□□□□□ -1.59
APP-213ENST00000464867 TIMM21Q9BVV7 248 aa5.11□□□□□ -1.59
APP-213ENST00000464867 BIN3Q9NQY0 253 aa5.11□□□□□ -1.59
APP-213ENST00000464867 SLC25A20O43772 301 aa5.1□□□□□ -1.59
APP-213ENST00000464867 POLR2KP53803 58 aaKnown RBP5.1□□□□□ -1.59
APP-213ENST00000464867 PRLHP81277 87 aa5.1□□□□□ -1.59
APP-213ENST00000464867 MPLKIPQ8TAP9 179 aa5.1□□□□□ -1.59
APP-213ENST00000464867 ENKURQ8TC29 256 aa5.1□□□□□ -1.59
APP-213ENST00000464867 PLEKHB2Q96CS7 222 aa5.1□□□□□ -1.59
APP-213ENST00000464867 GNB1LQ9BYB4 327 aa5.1□□□□□ -1.59
APP-213ENST00000464867 IFITM10A6NMD0 228 aa5.09□□□□□ -1.59
APP-213ENST00000464867 HBBP68871 147 aa5.09□□□□□ -1.59
APP-213ENST00000464867 CENPWQ5EE01 88 aa5.09□□□□□ -1.59
APP-213ENST00000464867 FAM19A1Q7Z5A9 133 aa5.09□□□□□ -1.59
APP-213ENST00000464867 NKAPP1Q8N9T2 125 aa5.09□□□□□ -1.59
APP-213ENST00000464867 PAM16Q9Y3D7 125 aa5.09□□□□□ -1.59
APP-213ENST00000464867 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.6
APP-213ENST00000464867 RPL7L1Q6DKI1 246 aaKnown RBP5.08□□□□□ -1.6
APP-213ENST00000464867 CBLN2Q8IUK8 224 aa5.08□□□□□ -1.6
APP-213ENST00000464867 SMIM12Q96EX1 92 aa5.08□□□□□ -1.6
APP-213ENST00000464867 GNG4P50150 75 aa5.07□□□□□ -1.6
APP-213ENST00000464867 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
APP-213ENST00000464867 C6orf226Q5I0X4 101 aa5.07□□□□□ -1.6
APP-213ENST00000464867 Q8N377 158 aa5.07□□□□□ -1.6
APP-213ENST00000464867 SFT2D1Q8WV19 159 aa5.07□□□□□ -1.6
APP-213ENST00000464867 TOMM7Q9P0U1 55 aa5.07□□□□□ -1.6
APP-213ENST00000464867 IGKV2-28A0A075B6P5 120 aa5.06□□□□□ -1.6
APP-213ENST00000464867 IGLV5-39A0A0G2JS06 123 aa5.06□□□□□ -1.6
APP-213ENST00000464867 PPP1R17O96001 155 aa5.06□□□□□ -1.6
APP-213ENST00000464867 IGKV2D-28P01615 120 aa5.06□□□□□ -1.6
APP-213ENST00000464867 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
APP-213ENST00000464867 KCNRGQ8N5I3 272 aa5.06□□□□□ -1.6
APP-213ENST00000464867 ZNF706Q9Y5V0 76 aaPredicted RBP5.06□□□□□ -1.6
APP-213ENST00000464867 A0A1B0GV50 99 aa5.05□□□□□ -1.6
APP-213ENST00000464867 BORCS7Q96B45 105 aa5.05□□□□□ -1.6
APP-213ENST00000464867 HIGD2AQ9BW72 106 aa5.05□□□□□ -1.6
APP-213ENST00000464867 TRBV20OR9-2A0A075B6H5 130 aa5.04□□□□□ -1.6
APP-213ENST00000464867 MRPS36P82909 103 aaKnown RBP5.04□□□□□ -1.6
APP-213ENST00000464867 LINC01561Q8N1V8 128 aa5.04□□□□□ -1.6
APP-213ENST00000464867 SPRR4Q96PI1 79 aa5.04□□□□□ -1.6
APP-213ENST00000464867 SPANXA1Q9NS26 97 aa5.04□□□□□ -1.6
APP-213ENST00000464867 TCAPO15273 167 aa5.03□□□□□ -1.6
APP-213ENST00000464867 CCL20P78556 96 aa5.03□□□□□ -1.6
APP-213ENST00000464867 Q6ZN92 141 aa5.03□□□□□ -1.6
APP-213ENST00000464867 ALKBH7Q9BT30 221 aaPredicted RBP5.03□□□□□ -1.6
APP-213ENST00000464867 TMEM126AQ9H061 195 aa5.03□□□□□ -1.6
APP-213ENST00000464867 GEMIN7Q9H840 131 aaKnown RBP5.03□□□□□ -1.6
APP-213ENST00000464867 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
APP-213ENST00000464867 F8VRH5 84 aa5.02□□□□□ -1.61
APP-213ENST00000464867 PPP1R2P9O14990 202 aa5.02□□□□□ -1.61
APP-213ENST00000464867 RPL39P62891 51 aaKnown RBP5.02□□□□□ -1.61
APP-213ENST00000464867 Q6Q795 121 aa5.02□□□□□ -1.61
APP-213ENST00000464867 LINC01551Q86U37 167 aa5.02□□□□□ -1.61
APP-213ENST00000464867 Q8IZM0 81 aa5.02□□□□□ -1.61
APP-213ENST00000464867 C11orf52Q96A22 123 aa5.02□□□□□ -1.61
APP-213ENST00000464867 RAB4AP20338 218 aa5.01□□□□□ -1.61
APP-213ENST00000464867 FAM213BQ8TBF2 198 aa5.01□□□□□ -1.61
APP-213ENST00000464867 MBD3L1Q8WWY6 194 aa5.01□□□□□ -1.61
APP-213ENST00000464867 URB1-AS1Q96HZ7 61 aa5.01□□□□□ -1.61
APP-213ENST00000464867 TMEM191AQ9H0A3 160 aa5.01□□□□□ -1.61
APP-213ENST00000464867 C9orf92A6NGG3 77 aa5□□□□□ -1.61
APP-213ENST00000464867 TMEM238C9JI98 176 aa5□□□□□ -1.61
APP-213ENST00000464867 MANBALQ9NQG1 85 aa5□□□□□ -1.61
APP-213ENST00000464867 IFI27P40305 119 aaPredicted RBP4.99□□□□□ -1.61
APP-213ENST00000464867 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
APP-213ENST00000464867 FAM104AQ969W3 186 aa4.99□□□□□ -1.61
APP-213ENST00000464867 A8MWL6 223 aa4.98□□□□□ -1.61
APP-213ENST00000464867 SMKR1H3BMG3 65 aa4.98□□□□□ -1.61
APP-213ENST00000464867 CXCL5P42830 114 aa4.98□□□□□ -1.61
APP-213ENST00000464867 SSBP3-AS1Q7Z2R9 100 aa4.98□□□□□ -1.61
APP-213ENST00000464867 AMN1Q8IY45 258 aa4.98□□□□□ -1.61
APP-213ENST00000464867 C2orf88Q9BSF0 95 aa4.98□□□□□ -1.61
APP-213ENST00000464867 MED9Q9NWA0 146 aa4.98□□□□□ -1.61
APP-213ENST00000464867 GNG13Q9P2W3 67 aa4.98□□□□□ -1.61
APP-213ENST00000464867 NEBP20929 6669 aa4.97□□□□□ -1.61
APP-213ENST00000464867 UMAD1C9J7I0 102 aa4.97□□□□□ -1.61
APP-213ENST00000464867 M0R378 163 aa4.97□□□□□ -1.61
APP-213ENST00000464867 SCO1O75880 301 aa4.97□□□□□ -1.61
APP-213ENST00000464867 MOBPQ13875 183 aa4.97□□□□□ -1.61
APP-213ENST00000464867 FXYD6-FXYD2A0A087WZ82 144 aa4.96□□□□□ -1.62
APP-213ENST00000464867 IGLV9-49A0A0B4J1Y8 123 aa4.96□□□□□ -1.62
APP-213ENST00000464867 A0A1B0GUT8 65 aa4.96□□□□□ -1.62
APP-213ENST00000464867 PDE6DO43924 150 aa4.96□□□□□ -1.62
APP-213ENST00000464867 VPREB1P12018 145 aa4.96□□□□□ -1.62
APP-213ENST00000464867 TEX43Q6ZNM6 134 aa4.96□□□□□ -1.62
APP-213ENST00000464867 TMEM141Q96I45 108 aa4.96□□□□□ -1.62
APP-213ENST00000464867 C20orf78Q9BR46 151 aa4.96□□□□□ -1.62
APP-213ENST00000464867 GATCO43716 136 aaKnown RBP4.95□□□□□ -1.62
APP-213ENST00000464867 RAB5BP61020 215 aa4.95□□□□□ -1.62
APP-213ENST00000464867 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
APP-213ENST00000464867 AKAP14Q86UN6 197 aa4.95□□□□□ -1.62
APP-213ENST00000464867 IGLV6-57P01721 117 aa4.94□□□□□ -1.62
APP-213ENST00000464867 RPL24P83731 157 aaKnown RBP4.94□□□□□ -1.62
APP-213ENST00000464867 PAPPA-AS1Q5QFB9 102 aa4.94□□□□□ -1.62
APP-213ENST00000464867 TEX46H3BTG2 121 aa4.93□□□□□ -1.62
APP-213ENST00000464867 Q5BKY6 102 aa4.93□□□□□ -1.62
APP-213ENST00000464867 FAM231DQ6ZW35 169 aa4.93□□□□□ -1.62
APP-213ENST00000464867 OCC1Q8TAD7 63 aa4.93□□□□□ -1.62
APP-213ENST00000464867 EIF5A2Q9GZV4 153 aaKnown RBP4.93□□□□□ -1.62
APP-213ENST00000464867 PYGO1Q9Y3Y4 419 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms