RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 MAJINQ3KP22 176 aa3.29□□□□□ -1.88
CD46-211ENST00000464082 ZC2HC1BQ5TFG8 222 aa3.29□□□□□ -1.88
CD46-211ENST00000464082 TMEM136Q6ZRR5 245 aa3.29□□□□□ -1.88
CD46-211ENST00000464082 STPG4Q8N801 248 aa3.29□□□□□ -1.88
CD46-211ENST00000464082 PRELID3AQ96N28 172 aa3.29□□□□□ -1.88
CD46-211ENST00000464082 SPANXA1Q9NS26 97 aa3.29□□□□□ -1.88
CD46-211ENST00000464082 PYGO1Q9Y3Y4 419 aa3.29□□□□□ -1.88
CD46-211ENST00000464082 A0A0J9YXV3 536 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 COX7A2LO14548 114 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 UBE2D1P51668 147 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 PRR3P79522 188 aaKnown RBP3.28□□□□□ -1.88
CD46-211ENST00000464082 SPAG11BQ08648 103 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 C10orf91Q5T1B1 145 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 LINC00242Q5T6M2 205 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 Q8N8P6 123 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 C2orf48Q96LS8 159 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 AMELXQ99217 191 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 LAMTOR2Q9Y2Q5 125 aa3.28□□□□□ -1.88
CD46-211ENST00000464082 LOC389332A0A1B0GUA5 103 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 LINC01546A6NGU7 62 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 IGIPA6NJ69 53 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 APOMO95445 188 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 MT-ND4LP03901 98 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 IFI27P40305 119 aaPredicted RBP3.27□□□□□ -1.89
CD46-211ENST00000464082 LINC01547P58512 204 aaPredicted RBP3.27□□□□□ -1.89
CD46-211ENST00000464082 SRSF9Q13242 221 aaKnown RBP eCLIP3.27□□□□□ -1.89
CD46-211ENST00000464082 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 UQCC3Q6UW78 93 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 FAM19A3Q7Z5A8 133 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 KRTAP11-1Q8IUC1 163 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 CAMK2N2Q96S95 79 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 IMMP2LQ96T52 175 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 MAP1LC3AQ9H492 121 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 MRPL35Q9NZE8 188 aaKnown RBP3.27□□□□□ -1.89
CD46-211ENST00000464082 C6orf48Q9UBA6 75 aa3.27□□□□□ -1.89
CD46-211ENST00000464082 A0A087WZ39 114 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 LOC107984640A0A0U1RRK4 108 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 TLX1NBP0CAT3 122 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 DSCR10P59022 87 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 RAB14P61106 215 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 SMAGPQ0VAQ4 97 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 KIAA1644Q3SXP7 199 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 C9orf116Q5BN46 136 aaPredicted RBP3.26□□□□□ -1.89
CD46-211ENST00000464082 PET117Q6UWS5 81 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 C2orf66Q6UXQ4 117 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 UNQ6190/PRO20217Q6UXQ8 127 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 OR10D4PQ8NGN7 298 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 ORAOV1Q8WV07 137 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 TMEM141Q96I45 108 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 SEC11CQ9BY50 192 aa3.26□□□□□ -1.89
CD46-211ENST00000464082 TRAV9-1A0A075B6T8 112 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 FAM168BA1KXE4 195 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 GAGE2BQ13066 116 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 C2orf82Q6UX34 121 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 Q6ZRP5 223 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 PHF5AQ7RTV0 110 aaKnown RBP3.25□□□□□ -1.89
CD46-211ENST00000464082 COMMD7Q86VX2 200 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 LINC01561Q8N1V8 128 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 C7orf33Q8WU49 177 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 DPH3Q96FX2 82 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 LINC01600Q96MT4 127 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 LINC00474Q9P2X8 69 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 CYSLTR1Q9Y271 337 aa3.25□□□□□ -1.89
CD46-211ENST00000464082 CARHSP1Q9Y2V2 147 aaKnown RBP3.25□□□□□ -1.89
CD46-211ENST00000464082 A0A096LNJ9 63 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 F8WDY8 70 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 K7EMI3 77 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 RAB5AP20339 215 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 RPL18AQ02543 176 aaKnown RBP3.24□□□□□ -1.89
CD46-211ENST00000464082 ORMDL2Q53FV1 153 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 C9orf129Q5T035 196 aaKnown RBP3.24□□□□□ -1.89
CD46-211ENST00000464082 TEX43Q6ZNM6 134 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 TOMM6Q96B49 74 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 TIMM17AQ99595 171 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 ALKBH7Q9BT30 221 aaPredicted RBP3.24□□□□□ -1.89
CD46-211ENST00000464082 GNB1LQ9BYB4 327 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 PSORS1C2Q9UIG4 136 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 LRP2P98164 4655 aa3.24□□□□□ -1.89
CD46-211ENST00000464082 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
CD46-211ENST00000464082 TGIF2-C20orf24A0A0A6YYL0 155 aa3.23□□□□□ -1.89
CD46-211ENST00000464082 NDUFA1O15239 70 aa3.23□□□□□ -1.89
CD46-211ENST00000464082 SPINK6Q6UWN8 80 aa3.23□□□□□ -1.89
CD46-211ENST00000464082 YPEL4Q96NS1 127 aa3.23□□□□□ -1.89
CD46-211ENST00000464082 NXT2Q9NPJ8 142 aaKnown RBP3.23□□□□□ -1.89
CD46-211ENST00000464082 CDKN2A-AS1Q9UH64 79 aa3.23□□□□□ -1.89
CD46-211ENST00000464082 PKIGQ9Y2B9 76 aa3.23□□□□□ -1.89
CD46-211ENST00000464082 UBR4Q5T4S7 5183 aa3.23□□□□□ -1.89
CD46-211ENST00000464082 TRBV30A0A0K0K1B3 111 aa3.22□□□□□ -1.89
CD46-211ENST00000464082 RHEBQ15382 184 aa3.22□□□□□ -1.89
CD46-211ENST00000464082 ERASQ7Z444 233 aa3.22□□□□□ -1.89
CD46-211ENST00000464082 LITAFQ99732 161 aa3.22□□□□□ -1.89
CD46-211ENST00000464082 C2orf88Q9BSF0 95 aa3.22□□□□□ -1.89
CD46-211ENST00000464082 VCX2Q9H322 139 aa3.22□□□□□ -1.89
CD46-211ENST00000464082 SMIM1B2RUZ4 78 aa3.21□□□□□ -1.9
CD46-211ENST00000464082 NDUFC2-KCTD14E9PQ53 114 aa3.21□□□□□ -1.9
CD46-211ENST00000464082 KRTAP1-4P0C5Y4 121 aa3.21□□□□□ -1.9
CD46-211ENST00000464082 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms