RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 S100A12P80511 92 aa-0.55□□□□□ -2.5
USP9X-204ENST00000463829 KRTAP6-2Q3LI66 62 aa-0.55□□□□□ -2.5
USP9X-204ENST00000463829 CENPEQ02224 2701 aa-0.55□□□□□ -2.5
USP9X-204ENST00000463829 KALRNO60229 2985 aa-0.55□□□□□ -2.5
USP9X-204ENST00000463829 WDR7Q9Y4E6 1490 aa-0.55□□□□□ -2.5
USP9X-204ENST00000463829 PHLPP1O60346 1717 aa-0.55□□□□□ -2.5
USP9X-204ENST00000463829 MYO7BQ6PIF6 2116 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 DNAH17Q9UFH2 4485 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 LRBAP50851 2863 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 SFT2D2O95562 160 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 IFNGP01579 166 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 SPRR1BP22528 89 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 CATR1Q13166 79 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 COMMD6Q7Z4G1 85 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 TSC22D3Q99576 134 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 MBD5Q9P267 1494 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 DCHS1Q96JQ0 3298 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 MGAQ8IWI9 3026 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 DMXL1Q9Y485 3027 aa-0.56□□□□□ -2.5
USP9X-204ENST00000463829 CEP290O15078 2479 aa-0.57□□□□□ -2.5
USP9X-204ENST00000463829 DNAH9Q9NYC9 4486 aa-0.57□□□□□ -2.5
USP9X-204ENST00000463829 SPG11Q96JI7 2443 aa-0.57□□□□□ -2.5
USP9X-204ENST00000463829 AKAP9Q99996 3911 aa-0.57□□□□□ -2.5
USP9X-204ENST00000463829 K7EP13 123 aa-0.57□□□□□ -2.5
USP9X-204ENST00000463829 MRPL54Q6P161 138 aaKnown RBP-0.57□□□□□ -2.5
USP9X-204ENST00000463829 C5orf38Q86SI9 138 aa-0.57□□□□□ -2.5
USP9X-204ENST00000463829 SPRR2FQ96RM1 72 aa-0.57□□□□□ -2.5
USP9X-204ENST00000463829 UNC80Q8N2C7 3258 aa-0.57□□□□□ -2.5
USP9X-204ENST00000463829 RAPGEF6Q8TEU7 1601 aa-0.57□□□□□ -2.5
USP9X-204ENST00000463829 LOC400499M0QZD8 3231 aa-0.58□□□□□ -2.5
USP9X-204ENST00000463829 UTP20O75691 2785 aaKnown RBP-0.58□□□□□ -2.5
USP9X-204ENST00000463829 MGPP08493 103 aa-0.58□□□□□ -2.5
USP9X-204ENST00000463829 DEFB123Q8N688 67 aa-0.58□□□□□ -2.5
USP9X-204ENST00000463829 MYOZ3Q8TDC0 251 aa-0.58□□□□□ -2.5
USP9X-204ENST00000463829 FAM107BQ9H098 131 aa-0.58□□□□□ -2.5
USP9X-204ENST00000463829 SPEGQ15772 3267 aa-0.58□□□□□ -2.5
USP9X-204ENST00000463829 DMDP11532 3685 aa-0.58□□□□□ -2.5
USP9X-204ENST00000463829 CSPG4Q6UVK1 2322 aa-0.59□□□□□ -2.5
USP9X-204ENST00000463829 FOCADQ5VW36 1801 aa-0.59□□□□□ -2.5
USP9X-204ENST00000463829 CRYBG3Q68DQ2 2970 aa-0.59□□□□□ -2.5
USP9X-204ENST00000463829 POLA1P09884 1462 aaPredicted RBP-0.59□□□□□ -2.5
USP9X-204ENST00000463829 TRANK1O15050 2925 aa-0.59□□□□□ -2.5
USP9X-204ENST00000463829 LOC100130705A0A1B0GUX0 176 aa-0.59□□□□□ -2.5
USP9X-204ENST00000463829 MT1BP07438 61 aa-0.59□□□□□ -2.5
USP9X-204ENST00000463829 MT1HL1P0DM35 61 aa-0.59□□□□□ -2.5
USP9X-204ENST00000463829 C1orf54Q8WWF1 131 aa-0.59□□□□□ -2.5
USP9X-204ENST00000463829 ADGRG4Q8IZF6 3080 aa-0.59□□□□□ -2.5
USP9X-204ENST00000463829 DNAH8Q96JB1 4490 aa-0.6□□□□□ -2.5
USP9X-204ENST00000463829 PDE4DIPQ5VU43 2346 aa-0.6□□□□□ -2.51
USP9X-204ENST00000463829 FREM2Q5SZK8 3169 aa-0.6□□□□□ -2.51
USP9X-204ENST00000463829 LOC730098B7Z3J9 87 aa-0.6□□□□□ -2.51
USP9X-204ENST00000463829 TMEM263Q8WUH6 116 aaKnown RBP-0.6□□□□□ -2.51
USP9X-204ENST00000463829 LINC00846Q9NV44 126 aa-0.6□□□□□ -2.51
USP9X-204ENST00000463829 LINC00474Q9P2X8 69 aa-0.6□□□□□ -2.51
USP9X-204ENST00000463829 TSC2P49815 1807 aa-0.6□□□□□ -2.51
USP9X-204ENST00000463829 PRUNE2Q8WUY3 3088 aa-0.6□□□□□ -2.51
USP9X-204ENST00000463829 MYOM1P52179 1685 aa-0.6□□□□□ -2.51
USP9X-204ENST00000463829 COL14A1Q05707 1796 aaKnown RBP-0.6□□□□□ -2.51
USP9X-204ENST00000463829 DNAH11Q96DT5 4516 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 NSD3Q9BZ95 1437 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 MYH7P12883 1935 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 ATMQ13315 3056 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 CHKB-CPT1BH3BT56 60 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 HMGN1P05114 100 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 AKAIN1P0CW23 69 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 NXT2Q9NPJ8 142 aaKnown RBP-0.61□□□□□ -2.51
USP9X-204ENST00000463829 FAIMQ9NVQ4 179 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 UQCR10Q9UDW1 63 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 ARHGEF12Q9NZN5 1544 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 WDFY4Q6ZS81 3184 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 SZT2Q5T011 3432 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 KTN1Q86UP2 1357 aaKnown RBP-0.61□□□□□ -2.51
USP9X-204ENST00000463829 SPTAN1Q13813 2472 aaKnown RBP-0.61□□□□□ -2.51
USP9X-204ENST00000463829 GAPVD1Q14C86 1478 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 SPTBN5Q9NRC6 3674 aaKnown RBP-0.61□□□□□ -2.51
USP9X-204ENST00000463829 PSME4Q14997 1843 aa-0.61□□□□□ -2.51
USP9X-204ENST00000463829 ACACAQ13085 2346 aa-0.62□□□□□ -2.51
USP9X-204ENST00000463829 OOSP1A8MZH6 123 aa-0.62□□□□□ -2.51
USP9X-204ENST00000463829 SPINK4O60575 86 aa-0.62□□□□□ -2.51
USP9X-204ENST00000463829 IGLC1P0CG04 106 aa-0.62□□□□□ -2.51
USP9X-204ENST00000463829 SPRR4Q96PI1 79 aa-0.62□□□□□ -2.51
USP9X-204ENST00000463829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.63□□□□□ -2.51
USP9X-204ENST00000463829 SMG6Q86US8 1419 aaKnown RBP-0.63□□□□□ -2.51
USP9X-204ENST00000463829 EP400Q96L91 3159 aa-0.63□□□□□ -2.51
USP9X-204ENST00000463829 TRBV7-4A0A0J9YYF1 115 aa-0.63□□□□□ -2.51
USP9X-204ENST00000463829 WHAMMP3Q1A5X7 153 aa-0.63□□□□□ -2.51
USP9X-204ENST00000463829 C10orf113Q5VZT2 155 aa-0.63□□□□□ -2.51
USP9X-204ENST00000463829 PP6455Q8WZ26 134 aa-0.63□□□□□ -2.51
USP9X-204ENST00000463829 CDC42SE2Q9NRR3 84 aa-0.63□□□□□ -2.51
USP9X-204ENST00000463829 NBASA2RRP1 2371 aa-0.63□□□□□ -2.51
USP9X-204ENST00000463829 VCANP13611 3396 aa-0.63□□□□□ -2.51
USP9X-204ENST00000463829 SHROOM2Q13796 1616 aa-0.64□□□□□ -2.51
USP9X-204ENST00000463829 FRYQ5TBA9 3013 aa-0.64□□□□□ -2.51
USP9X-204ENST00000463829 QRICH2Q9H0J4 1663 aa-0.64□□□□□ -2.51
USP9X-204ENST00000463829 A2ML1A8K2U0 1454 aa-0.64□□□□□ -2.51
USP9X-204ENST00000463829 UBE2L5PA0A1B0GUS4 154 aa-0.64□□□□□ -2.51
USP9X-204ENST00000463829 UBA52P62987 128 aaKnown RBP-0.64□□□□□ -2.51
USP9X-204ENST00000463829 UBE2L3P68036 154 aaKnown RBP-0.64□□□□□ -2.51
USP9X-204ENST00000463829 KLK9Q2XQG4 91 aa-0.64□□□□□ -2.51
USP9X-204ENST00000463829 LELP1Q5T871 98 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms