RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 TINCRA0A1B0GVN0 87 aa8.4□□□□□ -1.06
COMMD3-205ENST00000463688 UNQ6190/PRO20217Q6UXQ8 127 aa8.4□□□□□ -1.06
COMMD3-205ENST00000463688 PDZD11Q5EBL8 140 aa8.39□□□□□ -1.07
COMMD3-205ENST00000463688 LINC00469Q8N7U9 141 aa8.39□□□□□ -1.07
COMMD3-205ENST00000463688 TOMM7Q9P0U1 55 aa8.39□□□□□ -1.07
COMMD3-205ENST00000463688 TRAPPC1Q9Y5R8 145 aa8.39□□□□□ -1.07
COMMD3-205ENST00000463688 F8VRH5 84 aa8.38□□□□□ -1.07
COMMD3-205ENST00000463688 APOC3P02656 99 aa8.38□□□□□ -1.07
COMMD3-205ENST00000463688 KIAA0087Q14695 138 aa8.38□□□□□ -1.07
COMMD3-205ENST00000463688 PMVKQ15126 192 aa8.38□□□□□ -1.07
COMMD3-205ENST00000463688 LBHQ53QV2 105 aaPredicted RBP8.38□□□□□ -1.07
COMMD3-205ENST00000463688 SFTA2Q6UW10 78 aa8.38□□□□□ -1.07
COMMD3-205ENST00000463688 C6orf48Q9UBA6 75 aa8.38□□□□□ -1.07
COMMD3-205ENST00000463688 GAGE2EQ4V326 116 aa8.37□□□□□ -1.07
COMMD3-205ENST00000463688 LINC00173Q6ZV60 143 aa8.37□□□□□ -1.07
COMMD3-205ENST00000463688 GAGE2DQ9UEU5 116 aa8.37□□□□□ -1.07
COMMD3-205ENST00000463688 A0A0J9YXV3 536 aa8.37□□□□□ -1.07
COMMD3-205ENST00000463688 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
COMMD3-205ENST00000463688 ATP5LO75964 103 aa8.37□□□□□ -1.07
COMMD3-205ENST00000463688 LINC00614P0C842 121 aa8.37□□□□□ -1.07
COMMD3-205ENST00000463688 CST9LQ9H4G1 147 aa8.37□□□□□ -1.07
COMMD3-205ENST00000463688 HNRNPA3P51991 378 aaKnown RBP8.36□□□□□ -1.07
COMMD3-205ENST00000463688 UBE2BP63146 152 aa8.36□□□□□ -1.07
COMMD3-205ENST00000463688 DIRC1Q969H9 104 aa8.36□□□□□ -1.07
COMMD3-205ENST00000463688 LINC01600Q96MT4 127 aa8.36□□□□□ -1.07
COMMD3-205ENST00000463688 CDKN2A-AS1Q9UH64 79 aa8.36□□□□□ -1.07
COMMD3-205ENST00000463688 PKHD1L1Q86WI1 4243 aa8.35□□□□□ -1.07
COMMD3-205ENST00000463688 IGLV5-45A0A087WSX0 123 aa8.35□□□□□ -1.07
COMMD3-205ENST00000463688 HBDP02042 147 aa8.35□□□□□ -1.07
COMMD3-205ENST00000463688 C10orf25Q5T742 122 aa8.35□□□□□ -1.07
COMMD3-205ENST00000463688 SRSF9Q13242 221 aaKnown RBP eCLIP8.34□□□□□ -1.07
COMMD3-205ENST00000463688 C1orf137Q5JT78 98 aa8.34□□□□□ -1.07
COMMD3-205ENST00000463688 PLA2G2DQ9UNK4 145 aa8.34□□□□□ -1.07
COMMD3-205ENST00000463688 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.08
COMMD3-205ENST00000463688 C2orf82Q6UX34 121 aa8.33□□□□□ -1.08
COMMD3-205ENST00000463688 COX7B2Q8TF08 81 aa8.33□□□□□ -1.08
COMMD3-205ENST00000463688 PSORS1C2Q9UIG4 136 aa8.33□□□□□ -1.08
COMMD3-205ENST00000463688 M0QXV9 152 aa8.32□□□□□ -1.08
COMMD3-205ENST00000463688 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-205ENST00000463688 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
COMMD3-205ENST00000463688 LRP1Q07954 4544 aaKnown RBP8.31□□□□□ -1.08
COMMD3-205ENST00000463688 NUPR1O60356 82 aa8.31□□□□□ -1.08
COMMD3-205ENST00000463688 NDUFA6P56556 154 aa8.31□□□□□ -1.08
COMMD3-205ENST00000463688 ZC2HC1BQ5TFG8 222 aa8.31□□□□□ -1.08
COMMD3-205ENST00000463688 PHF5AQ7RTV0 110 aaKnown RBP8.31□□□□□ -1.08
COMMD3-205ENST00000463688 CHCHD1Q96BP2 118 aaKnown RBP8.31□□□□□ -1.08
COMMD3-205ENST00000463688 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
COMMD3-205ENST00000463688 C18orf32Q8TCD1 76 aa8.3□□□□□ -1.08
COMMD3-205ENST00000463688 IGLV7-43P04211 117 aa8.29□□□□□ -1.08
COMMD3-205ENST00000463688 IGLC3P0DOY3 106 aa8.29□□□□□ -1.08
COMMD3-205ENST00000463688 COX17Q14061 63 aa8.29□□□□□ -1.08
COMMD3-205ENST00000463688 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
COMMD3-205ENST00000463688 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
COMMD3-205ENST00000463688 C9orf129Q5T035 196 aaKnown RBP8.26□□□□□ -1.09
COMMD3-205ENST00000463688 BAGE3Q86Y29 109 aa8.26□□□□□ -1.09
COMMD3-205ENST00000463688 C22orf24Q9Y442 160 aa8.26□□□□□ -1.09
COMMD3-205ENST00000463688 FAM168BA1KXE4 195 aa8.25□□□□□ -1.09
COMMD3-205ENST00000463688 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
COMMD3-205ENST00000463688 RPL13AP40429 203 aaKnown RBP8.25□□□□□ -1.09
COMMD3-205ENST00000463688 RPL24P83731 157 aaKnown RBP8.25□□□□□ -1.09
COMMD3-205ENST00000463688 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
COMMD3-205ENST00000463688 NKAPP1Q8N9T2 125 aa8.25□□□□□ -1.09
COMMD3-205ENST00000463688 IGLV1-50A0A075B6I6 118 aa8.24□□□□□ -1.09
COMMD3-205ENST00000463688 LOC100996750A0A140TA64 210 aa8.24□□□□□ -1.09
COMMD3-205ENST00000463688 H0Y9J4 135 aa8.24□□□□□ -1.09
COMMD3-205ENST00000463688 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
COMMD3-205ENST00000463688 TMEM170BQ5T4T1 132 aa8.24□□□□□ -1.09
COMMD3-205ENST00000463688 KRTAP4-6Q9BYQ5 205 aa8.24□□□□□ -1.09
COMMD3-205ENST00000463688 XAGE1AQ9HD64 81 aa8.24□□□□□ -1.09
COMMD3-205ENST00000463688 TRAV12-1A0A0B4J245 112 aa8.23□□□□□ -1.09
COMMD3-205ENST00000463688 IGLV5-39A0A0G2JS06 123 aa8.23□□□□□ -1.09
COMMD3-205ENST00000463688 HSBP1O75506 76 aa8.23□□□□□ -1.09
COMMD3-205ENST00000463688 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
COMMD3-205ENST00000463688 ZNF861PO60384 105 aa8.22□□□□□ -1.09
COMMD3-205ENST00000463688 CHTOPQ9Y3Y2 248 aaKnown RBP8.22□□□□□ -1.09
COMMD3-205ENST00000463688 ATP6V1G1O75348 118 aa8.21□□□□□ -1.09
COMMD3-205ENST00000463688 ZNF22P17026 224 aaPredicted RBP8.21□□□□□ -1.09
COMMD3-205ENST00000463688 IFI27L1Q96BM0 104 aa8.21□□□□□ -1.09
COMMD3-205ENST00000463688 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
COMMD3-205ENST00000463688 A0A096LNJ9 63 aa8.2□□□□□ -1.1
COMMD3-205ENST00000463688 BCE1O60756 84 aa8.2□□□□□ -1.1
COMMD3-205ENST00000463688 HSPB8Q9UJY1 196 aa8.2□□□□□ -1.1
COMMD3-205ENST00000463688 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
COMMD3-205ENST00000463688 HERV-K104P63124 156 aa8.19□□□□□ -1.1
COMMD3-205ENST00000463688 URB1-AS1Q96HZ7 61 aa8.19□□□□□ -1.1
COMMD3-205ENST00000463688 YPEL4Q96NS1 127 aa8.19□□□□□ -1.1
COMMD3-205ENST00000463688 TMA7Q9Y2S6 64 aaKnown RBP8.19□□□□□ -1.1
COMMD3-205ENST00000463688 GHRHP01286 108 aa8.18□□□□□ -1.1
COMMD3-205ENST00000463688 PFN2P35080 140 aa8.18□□□□□ -1.1
COMMD3-205ENST00000463688 PMCHL1Q16048 86 aa8.18□□□□□ -1.1
COMMD3-205ENST00000463688 MAP1LC3CQ9BXW4 147 aa8.18□□□□□ -1.1
COMMD3-205ENST00000463688 TNXBP22105 4242 aa8.17□□□□□ -1.1
COMMD3-205ENST00000463688 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
COMMD3-205ENST00000463688 C11orf86A6NJI1 115 aa8.17□□□□□ -1.1
COMMD3-205ENST00000463688 S100A12P80511 92 aa8.17□□□□□ -1.1
COMMD3-205ENST00000463688 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
COMMD3-205ENST00000463688 LEPROTL1O95214 131 aa8.16□□□□□ -1.1
COMMD3-205ENST00000463688 PLNP26678 52 aa8.16□□□□□ -1.1
COMMD3-205ENST00000463688 LINC00167Q96N53 147 aa8.16□□□□□ -1.1
COMMD3-205ENST00000463688 TMEM238LA0A1B0GVL6 79 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms