RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 A0A0G2JQZ4 141 aa2.82□□□□□ -1.96
COPS3-205ENST00000463097 hADV29S1A0JD25 119 aa2.82□□□□□ -1.96
COPS3-205ENST00000463097 H0YGX0 51 aa2.82□□□□□ -1.96
COPS3-205ENST00000463097 BAALC-AS2P0C853 105 aa2.82□□□□□ -1.96
COPS3-205ENST00000463097 Q8N6K4 173 aa2.82□□□□□ -1.96
COPS3-205ENST00000463097 LAMTOR3Q9UHA4 124 aa2.82□□□□□ -1.96
COPS3-205ENST00000463097 F5P12259 2224 aa2.82□□□□□ -1.96
COPS3-205ENST00000463097 TRANK1O15050 2925 aa2.82□□□□□ -1.96
COPS3-205ENST00000463097 CENPFP49454 3210 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 TRGV4A0A0C4DH28 118 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 CLPSL1A2RUU4 121 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 M0R378 163 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 NDUFA1O15239 70 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 NDUFC1O43677 76 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 RNASE3P12724 160 aaKnown RBP2.81□□□□□ -1.96
COPS3-205ENST00000463097 ATP5EP56381 51 aaPredicted RBP2.81□□□□□ -1.96
COPS3-205ENST00000463097 NPC2P61916 151 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 WFDC11Q8NEX6 87 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 RPL39LQ96EH5 51 aaKnown RBP2.81□□□□□ -1.96
COPS3-205ENST00000463097 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 NDUFA12Q9UI09 145 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 UBE2D4Q9Y2X8 147 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 C22orf24Q9Y442 160 aa2.81□□□□□ -1.96
COPS3-205ENST00000463097 TRAV13-2A0A0B4J235 113 aa2.8□□□□□ -1.96
COPS3-205ENST00000463097 M0QY20 66 aa2.8□□□□□ -1.96
COPS3-205ENST00000463097 M0R1W7 72 aa2.8□□□□□ -1.96
COPS3-205ENST00000463097 UBE2BP63146 152 aa2.8□□□□□ -1.96
COPS3-205ENST00000463097 MINOS1Q5TGZ0 78 aa2.8□□□□□ -1.96
COPS3-205ENST00000463097 MED12Q93074 2177 aa2.8□□□□□ -1.96
COPS3-205ENST00000463097 TMEM256-PLSCR3K7ERE1 68 aa2.79□□□□□ -1.96
COPS3-205ENST00000463097 MGPP08493 103 aa2.79□□□□□ -1.96
COPS3-205ENST00000463097 KRTAP10-10P60014 251 aa2.79□□□□□ -1.96
COPS3-205ENST00000463097 RPL39P62891 51 aaKnown RBP2.79□□□□□ -1.96
COPS3-205ENST00000463097 KLKP1Q107X0 134 aa2.79□□□□□ -1.96
COPS3-205ENST00000463097 TPRXLQ17RH7 258 aa2.79□□□□□ -1.96
COPS3-205ENST00000463097 HRCT1Q6UXD1 115 aa2.79□□□□□ -1.96
COPS3-205ENST00000463097 C3orf56Q8N813 242 aa2.79□□□□□ -1.96
COPS3-205ENST00000463097 LINC00308Q8TCZ7 52 aa2.79□□□□□ -1.96
COPS3-205ENST00000463097 CLEC2BQ92478 149 aa2.79□□□□□ -1.96
COPS3-205ENST00000463097 TNCP24821 2201 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 MYO9BQ13459 2157 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 ARHGAP32A7KAX9 2087 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 HTTP42858 3142 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 FAM223BA6NKX1 122 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 JMJD7-PLA2G4BH0Y9G9 81 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 ERC2-IT1O76042 136 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 CCKP06307 115 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 APELAP0DMC3 54 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 Q6ZQT0 140 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 VMO1Q7Z5L0 202 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 FAM223AQ8IWN6 122 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 PCNX2A6NKB5 2137 aa2.78□□□□□ -1.96
COPS3-205ENST00000463097 HEATR1Q9H583 2144 aaKnown RBP2.78□□□□□ -1.96
COPS3-205ENST00000463097 FREM1Q5H8C1 2179 aa2.77□□□□□ -1.97
COPS3-205ENST00000463097 H3BUA1 57 aa2.77□□□□□ -1.97
COPS3-205ENST00000463097 NDUFA4O00483 81 aa2.77□□□□□ -1.97
COPS3-205ENST00000463097 DNAL4O96015 105 aa2.77□□□□□ -1.97
COPS3-205ENST00000463097 DSCR8Q96T75 97 aa2.77□□□□□ -1.97
COPS3-205ENST00000463097 BRWD1Q9NSI6 2320 aa2.77□□□□□ -1.97
COPS3-205ENST00000463097 MYO7AQ13402 2215 aa2.77□□□□□ -1.97
COPS3-205ENST00000463097 DIDO1Q9BTC0 2240 aaKnown RBP2.77□□□□□ -1.97
COPS3-205ENST00000463097 ASXL3Q9C0F0 2248 aa2.76□□□□□ -1.97
COPS3-205ENST00000463097 SDK2Q58EX2 2172 aa2.76□□□□□ -1.97
COPS3-205ENST00000463097 MALRD1Q5VYJ5 2156 aa2.76□□□□□ -1.97
COPS3-205ENST00000463097 H7BZZ5 65 aa2.76□□□□□ -1.97
COPS3-205ENST00000463097 USMG5Q96IX5 58 aa2.76□□□□□ -1.97
COPS3-205ENST00000463097 LINC00846Q9NV44 126 aa2.76□□□□□ -1.97
COPS3-205ENST00000463097 CHD7Q9P2D1 2997 aa2.75□□□□□ -1.97
COPS3-205ENST00000463097 KNTC1P50748 2209 aa2.75□□□□□ -1.97
COPS3-205ENST00000463097 ASCC3Q8N3C0 2202 aaKnown RBP2.75□□□□□ -1.97
COPS3-205ENST00000463097 IBA57-AS1B1ANH7 110 aa2.75□□□□□ -1.97
COPS3-205ENST00000463097 PDE6GP18545 87 aa2.75□□□□□ -1.97
COPS3-205ENST00000463097 Q8N2B8 174 aa2.75□□□□□ -1.97
COPS3-205ENST00000463097 ZNF625Q96I27 306 aaPredicted RBP2.75□□□□□ -1.97
COPS3-205ENST00000463097 LINC00467Q9BRT7 94 aa2.75□□□□□ -1.97
COPS3-205ENST00000463097 CYSTM1Q9H1C7 97 aa2.75□□□□□ -1.97
COPS3-205ENST00000463097 PI4KAP42356 2102 aa2.75□□□□□ -1.97
COPS3-205ENST00000463097 CACNA1GO43497 2377 aa2.74□□□□□ -1.97
COPS3-205ENST00000463097 SOSTDC1Q6X4U4 206 aa2.74□□□□□ -1.97
COPS3-205ENST00000463097 SPACA4Q8TDM5 124 aa2.74□□□□□ -1.97
COPS3-205ENST00000463097 C10orf105Q8TEF2 133 aa2.74□□□□□ -1.97
COPS3-205ENST00000463097 UBL5Q9BZL1 73 aa2.74□□□□□ -1.97
COPS3-205ENST00000463097 UTRNP46939 3433 aa2.74□□□□□ -1.97
COPS3-205ENST00000463097 NAV3Q8IVL0 2385 aa2.74□□□□□ -1.97
COPS3-205ENST00000463097 CACNA1EQ15878 2313 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 KNL1Q8NG31 2342 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 IGKV3D-7A0A0C4DH55 119 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 TRBV7-6A0A0J9YX20 115 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 A8MTW9 85 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 CRPP02741 224 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 C7orf65Q6ZTY9 151 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 FP248Q71RG6 208 aaPredicted RBP2.73□□□□□ -1.97
COPS3-205ENST00000463097 C9orf163Q8N9P6 203 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 ORMDL1Q9P0S3 153 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 CDKN2A-AS1Q9UH64 79 aa2.73□□□□□ -1.97
COPS3-205ENST00000463097 LOC110117498A0A087WWA1 95 aa2.72□□□□□ -1.97
COPS3-205ENST00000463097 BLCAPP62952 87 aa2.72□□□□□ -1.97
COPS3-205ENST00000463097 PRR15Q8IV56 129 aa2.72□□□□□ -1.97
COPS3-205ENST00000463097 C20orf197Q8N268 126 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms