RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PAM16Q9Y3D7 125 aa9.35□□□□□ -0.91
COL6A1-202ENST00000463060 PRSS2P07478 247 aa9.34□□□□□ -0.91
COL6A1-202ENST00000463060 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
COL6A1-202ENST00000463060 SPATA45Q537H7 98 aa9.34□□□□□ -0.91
COL6A1-202ENST00000463060 C10orf25Q5T742 122 aa9.34□□□□□ -0.91
COL6A1-202ENST00000463060 UNQ6190/PRO20217Q6UXQ8 127 aa9.34□□□□□ -0.91
COL6A1-202ENST00000463060 TTTY13Q9BZ97 58 aa9.34□□□□□ -0.91
COL6A1-202ENST00000463060 NDUFA1O15239 70 aa9.33□□□□□ -0.92
COL6A1-202ENST00000463060 CXCL5P42830 114 aa9.33□□□□□ -0.92
COL6A1-202ENST00000463060 LINC00336Q6ZUF6 198 aa9.33□□□□□ -0.92
COL6A1-202ENST00000463060 PCP2Q8IVA1 136 aa9.33□□□□□ -0.92
COL6A1-202ENST00000463060 NDUFA12Q9UI09 145 aa9.33□□□□□ -0.92
COL6A1-202ENST00000463060 NMUP48645 174 aa9.32□□□□□ -0.92
COL6A1-202ENST00000463060 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
COL6A1-202ENST00000463060 Q6ZRU5 148 aa9.32□□□□□ -0.92
COL6A1-202ENST00000463060 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
COL6A1-202ENST00000463060 PKD1P98161 4303 aa9.32□□□□□ -0.92
COL6A1-202ENST00000463060 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
COL6A1-202ENST00000463060 CKS1BP61024 79 aa9.31□□□□□ -0.92
COL6A1-202ENST00000463060 RNF151Q2KHN1 245 aa9.31□□□□□ -0.92
COL6A1-202ENST00000463060 CAMK2N2Q96S95 79 aa9.31□□□□□ -0.92
COL6A1-202ENST00000463060 MYMXA0A1B0GTQ4 84 aa9.3□□□□□ -0.92
COL6A1-202ENST00000463060 COX8AP10176 69 aa9.3□□□□□ -0.92
COL6A1-202ENST00000463060 HERV-K104P63124 156 aa9.3□□□□□ -0.92
COL6A1-202ENST00000463060 S100A12P80511 92 aa9.3□□□□□ -0.92
COL6A1-202ENST00000463060 SFTA2Q6UW10 78 aa9.3□□□□□ -0.92
COL6A1-202ENST00000463060 BOD1L2Q8IYS8 172 aa9.3□□□□□ -0.92
COL6A1-202ENST00000463060 C12orf57Q99622 126 aa9.3□□□□□ -0.92
COL6A1-202ENST00000463060 C6orf48Q9UBA6 75 aa9.3□□□□□ -0.92
COL6A1-202ENST00000463060 DLEU1O43261 78 aa9.29□□□□□ -0.92
COL6A1-202ENST00000463060 C14orf144Q96I85 54 aa9.29□□□□□ -0.92
COL6A1-202ENST00000463060 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.28□□□□□ -0.92
COL6A1-202ENST00000463060 TRBV30A0A0K0K1B3 111 aa9.28□□□□□ -0.92
COL6A1-202ENST00000463060 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
COL6A1-202ENST00000463060 C9orf163Q8N9P6 203 aa9.28□□□□□ -0.92
COL6A1-202ENST00000463060 CARD19Q96LW7 228 aa9.28□□□□□ -0.92
COL6A1-202ENST00000463060 A0A0J9YXY3 114 aa9.27□□□□□ -0.93
COL6A1-202ENST00000463060 A0A1B0GVY2 172 aa9.27□□□□□ -0.93
COL6A1-202ENST00000463060 EREGO14944 169 aa9.27□□□□□ -0.93
COL6A1-202ENST00000463060 C9orf116Q5BN46 136 aaPredicted RBP9.27□□□□□ -0.93
COL6A1-202ENST00000463060 KRTAP10-2P60368 255 aa9.26□□□□□ -0.93
COL6A1-202ENST00000463060 TP73-AS1Q9UF72 201 aa9.26□□□□□ -0.93
COL6A1-202ENST00000463060 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.25□□□□□ -0.93
COL6A1-202ENST00000463060 LITAFQ99732 161 aa9.25□□□□□ -0.93
COL6A1-202ENST00000463060 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
COL6A1-202ENST00000463060 TIMM17BO60830 172 aa9.24□□□□□ -0.93
COL6A1-202ENST00000463060 TLX1NBP0CAT3 122 aa9.24□□□□□ -0.93
COL6A1-202ENST00000463060 FUSP35637 526 aaKnown RBP eCLIP9.24□□□□□ -0.93
COL6A1-202ENST00000463060 SLC25A34Q6PIV7 304 aa9.24□□□□□ -0.93
COL6A1-202ENST00000463060 SDIM1Q6ZPB5 146 aa9.24□□□□□ -0.93
COL6A1-202ENST00000463060 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
COL6A1-202ENST00000463060 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
COL6A1-202ENST00000463060 COX17Q14061 63 aa9.23□□□□□ -0.93
COL6A1-202ENST00000463060 ADAMTSL4-AS1Q5T5F5 129 aa9.23□□□□□ -0.93
COL6A1-202ENST00000463060 DNAH5Q8TE73 4624 aa9.23□□□□□ -0.93
COL6A1-202ENST00000463060 LINC00587B1AMM8 73 aa9.22□□□□□ -0.93
COL6A1-202ENST00000463060 C2orf91Q6ZV80 131 aa9.22□□□□□ -0.93
COL6A1-202ENST00000463060 PRO1933Q9H354 126 aa9.22□□□□□ -0.93
COL6A1-202ENST00000463060 IGLV5-52A0A0A0MRZ9 124 aa9.21□□□□□ -0.94
COL6A1-202ENST00000463060 NDUFC2-KCTD14E9PQ53 114 aa9.21□□□□□ -0.94
COL6A1-202ENST00000463060 PFN2P35080 140 aa9.21□□□□□ -0.94
COL6A1-202ENST00000463060 Q6ZRP5 223 aa9.21□□□□□ -0.94
COL6A1-202ENST00000463060 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
COL6A1-202ENST00000463060 LINC01620Q4KN68 170 aa9.2□□□□□ -0.94
COL6A1-202ENST00000463060 MEIG1Q5JSS6 88 aa9.2□□□□□ -0.94
COL6A1-202ENST00000463060 KRTAP17-1Q9BYP8 105 aa9.2□□□□□ -0.94
COL6A1-202ENST00000463060 HIGD1BQ9P298 99 aa9.2□□□□□ -0.94
COL6A1-202ENST00000463060 UQCR10Q9UDW1 63 aa9.2□□□□□ -0.94
COL6A1-202ENST00000463060 LINC00158P58513 81 aa9.19□□□□□ -0.94
COL6A1-202ENST00000463060 SCGB1D4Q6XE38 83 aa9.19□□□□□ -0.94
COL6A1-202ENST00000463060 MIEN1Q9BRT3 115 aa9.19□□□□□ -0.94
COL6A1-202ENST00000463060 PKHD1P08F94 4074 aa9.18□□□□□ -0.94
COL6A1-202ENST00000463060 LOC107984156A0A0G2JMH3 177 aa9.18□□□□□ -0.94
COL6A1-202ENST00000463060 A0A0U1RRA0 63 aa9.18□□□□□ -0.94
COL6A1-202ENST00000463060 CIRBPQ14011 172 aaKnown RBP9.18□□□□□ -0.94
COL6A1-202ENST00000463060 ARL17AQ8IVW1 177 aa9.18□□□□□ -0.94
COL6A1-202ENST00000463060 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
COL6A1-202ENST00000463060 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
COL6A1-202ENST00000463060 SPANXB1Q9NS25 103 aaPredicted RBP9.18□□□□□ -0.94
COL6A1-202ENST00000463060 SPANXCQ9NY87 97 aa9.18□□□□□ -0.94
COL6A1-202ENST00000463060 DNAH8Q96JB1 4490 aa9.18□□□□□ -0.94
COL6A1-202ENST00000463060 EIF4EBP3O60516 100 aaPredicted RBP9.17□□□□□ -0.94
COL6A1-202ENST00000463060 PTTG1IPP53801 180 aa9.17□□□□□ -0.94
COL6A1-202ENST00000463060 A0A096LNI7 61 aa9.16□□□□□ -0.94
COL6A1-202ENST00000463060 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
COL6A1-202ENST00000463060 TMEM238C9JI98 176 aa9.16□□□□□ -0.94
COL6A1-202ENST00000463060 Q6ZVH6 145 aa9.16□□□□□ -0.94
COL6A1-202ENST00000463060 DAND5Q8N907 189 aa9.16□□□□□ -0.94
COL6A1-202ENST00000463060 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
COL6A1-202ENST00000463060 GCSHP23434 173 aa9.15□□□□□ -0.94
COL6A1-202ENST00000463060 C9orf129Q5T035 196 aaKnown RBP9.15□□□□□ -0.94
COL6A1-202ENST00000463060 SOSTDC1Q6X4U4 206 aa9.15□□□□□ -0.94
COL6A1-202ENST00000463060 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.94
COL6A1-202ENST00000463060 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
COL6A1-202ENST00000463060 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
COL6A1-202ENST00000463060 TSTD3H0UI37 97 aa9.14□□□□□ -0.95
COL6A1-202ENST00000463060 PANO1I0J062 215 aa9.14□□□□□ -0.95
COL6A1-202ENST00000463060 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
COL6A1-202ENST00000463060 RPL18AQ02543 176 aaKnown RBP9.14□□□□□ -0.95
COL6A1-202ENST00000463060 LINC00308Q8TCZ7 52 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms