RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 Q6ZRP5 223 aa8.35□□□□□ -1.07
LRRC47-202ENST00000462356 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
LRRC47-202ENST00000462356 FAM168BA1KXE4 195 aa8.34□□□□□ -1.07
LRRC47-202ENST00000462356 F8WDY8 70 aa8.34□□□□□ -1.07
LRRC47-202ENST00000462356 SPINK8P0C7L1 97 aa8.34□□□□□ -1.07
LRRC47-202ENST00000462356 CKS1BP61024 79 aa8.34□□□□□ -1.07
LRRC47-202ENST00000462356 PDZD11Q5EBL8 140 aa8.34□□□□□ -1.07
LRRC47-202ENST00000462356 SMIM1B2RUZ4 78 aa8.33□□□□□ -1.08
LRRC47-202ENST00000462356 SCO1O75880 301 aa8.33□□□□□ -1.08
LRRC47-202ENST00000462356 Q8IZM0 81 aa8.33□□□□□ -1.08
LRRC47-202ENST00000462356 TRBV30A0A0K0K1B3 111 aa8.32□□□□□ -1.08
LRRC47-202ENST00000462356 PHF5AQ7RTV0 110 aaKnown RBP8.32□□□□□ -1.08
LRRC47-202ENST00000462356 BAGE3Q86Y29 109 aa8.32□□□□□ -1.08
LRRC47-202ENST00000462356 IGLV5-45A0A087WSX0 123 aa8.31□□□□□ -1.08
LRRC47-202ENST00000462356 COLCA2A8K830 154 aa8.31□□□□□ -1.08
LRRC47-202ENST00000462356 J3QL48 77 aa8.31□□□□□ -1.08
LRRC47-202ENST00000462356 TLX1NBP0CAT3 122 aa8.31□□□□□ -1.08
LRRC47-202ENST00000462356 FAM19A2Q8N3H0 131 aa8.31□□□□□ -1.08
LRRC47-202ENST00000462356 ATP5LO75964 103 aa8.3□□□□□ -1.08
LRRC47-202ENST00000462356 IGLC3P0DOY3 106 aa8.3□□□□□ -1.08
LRRC47-202ENST00000462356 PRR3P79522 188 aaKnown RBP8.3□□□□□ -1.08
LRRC47-202ENST00000462356 FAM19A5Q7Z5A7 132 aaPredicted RBP8.3□□□□□ -1.08
LRRC47-202ENST00000462356 COX7B2Q8TF08 81 aa8.3□□□□□ -1.08
LRRC47-202ENST00000462356 CHCHD1Q96BP2 118 aaKnown RBP8.3□□□□□ -1.08
LRRC47-202ENST00000462356 NDUFC2-KCTD14E9PQ53 114 aa8.29□□□□□ -1.08
LRRC47-202ENST00000462356 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
LRRC47-202ENST00000462356 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
LRRC47-202ENST00000462356 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
LRRC47-202ENST00000462356 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
LRRC47-202ENST00000462356 F8VRH5 84 aa8.28□□□□□ -1.08
LRRC47-202ENST00000462356 NUPR1O60356 82 aa8.28□□□□□ -1.08
LRRC47-202ENST00000462356 HSBP1O75506 76 aa8.28□□□□□ -1.08
LRRC47-202ENST00000462356 LINC00310P59036 64 aa8.28□□□□□ -1.08
LRRC47-202ENST00000462356 C9orf129Q5T035 196 aaKnown RBP8.28□□□□□ -1.08
LRRC47-202ENST00000462356 IFI27L1Q96BM0 104 aa8.28□□□□□ -1.08
LRRC47-202ENST00000462356 H3BRM9 83 aa8.27□□□□□ -1.09
LRRC47-202ENST00000462356 SERF1AO75920 110 aa8.27□□□□□ -1.09
LRRC47-202ENST00000462356 XAGE1AQ9HD64 81 aa8.27□□□□□ -1.09
LRRC47-202ENST00000462356 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
LRRC47-202ENST00000462356 TMEM170BQ5T4T1 132 aa8.26□□□□□ -1.09
LRRC47-202ENST00000462356 KRTAP11-1Q8IUC1 163 aa8.26□□□□□ -1.09
LRRC47-202ENST00000462356 MYCBP2O75592 4640 aa8.26□□□□□ -1.09
LRRC47-202ENST00000462356 H0Y8G0 127 aa8.25□□□□□ -1.09
LRRC47-202ENST00000462356 CXCL5P42830 114 aa8.25□□□□□ -1.09
LRRC47-202ENST00000462356 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
LRRC47-202ENST00000462356 IGLV5-39A0A0G2JS06 123 aa8.23□□□□□ -1.09
LRRC47-202ENST00000462356 M0QXV9 152 aa8.23□□□□□ -1.09
LRRC47-202ENST00000462356 OXTP01178 125 aa8.23□□□□□ -1.09
LRRC47-202ENST00000462356 FABP4P15090 132 aa8.23□□□□□ -1.09
LRRC47-202ENST00000462356 SERTAD4-AS1Q5TG53 156 aa8.23□□□□□ -1.09
LRRC47-202ENST00000462356 ZNF625Q96I27 306 aaPredicted RBP8.23□□□□□ -1.09
LRRC47-202ENST00000462356 TRAV12-1A0A0B4J245 112 aa8.22□□□□□ -1.09
LRRC47-202ENST00000462356 C1orf137Q5JT78 98 aa8.22□□□□□ -1.09
LRRC47-202ENST00000462356 LRP1Q07954 4544 aaKnown RBP8.22□□□□□ -1.09
LRRC47-202ENST00000462356 LEPROTL1O95214 131 aa8.21□□□□□ -1.1
LRRC47-202ENST00000462356 PFN2P35080 140 aa8.21□□□□□ -1.1
LRRC47-202ENST00000462356 UBE2BP63146 152 aa8.2□□□□□ -1.1
LRRC47-202ENST00000462356 SRSF9Q13242 221 aaKnown RBP eCLIP8.2□□□□□ -1.1
LRRC47-202ENST00000462356 C22orf24Q9Y442 160 aa8.2□□□□□ -1.1
LRRC47-202ENST00000462356 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
LRRC47-202ENST00000462356 TMEM223A0PJW6 202 aa8.19□□□□□ -1.1
LRRC47-202ENST00000462356 PMCHL2Q9BQD1 86 aa8.19□□□□□ -1.1
LRRC47-202ENST00000462356 HIST1H2BKO60814 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST1H2BJP06899 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST1H2BOP23527 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST1H2BBP33778 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST1H2BDP58876 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST1H2BCP62807 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 ODF1Q14990 250 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST2H2BEQ16778 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.18□□□□□ -1.1
LRRC47-202ENST00000462356 SPINK6Q6UWN8 80 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST1H2BHQ93079 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST1H2BNQ99877 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 HIST1H2BMQ99879 126 aa8.18□□□□□ -1.1
LRRC47-202ENST00000462356 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
LRRC47-202ENST00000462356 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
LRRC47-202ENST00000462356 A0A0U1RRA0 63 aa8.16□□□□□ -1.1
LRRC47-202ENST00000462356 ERG28Q9UKR5 140 aa8.16□□□□□ -1.1
LRRC47-202ENST00000462356 GAGE10A6NGK3 116 aa8.15□□□□□ -1.1
LRRC47-202ENST00000462356 IGLV7-43P04211 117 aa8.15□□□□□ -1.1
LRRC47-202ENST00000462356 HSPB8Q9UJY1 196 aa8.15□□□□□ -1.1
LRRC47-202ENST00000462356 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.1
LRRC47-202ENST00000462356 RPL37AP8A6NKH3 93 aa8.14□□□□□ -1.11
LRRC47-202ENST00000462356 SND1-IT1Q9HBX3 110 aa8.14□□□□□ -1.11
LRRC47-202ENST00000462356 HERC1Q15751 4861 aa8.13□□□□□ -1.11
LRRC47-202ENST00000462356 LINC00158P58513 81 aa8.13□□□□□ -1.11
LRRC47-202ENST00000462356 MRPL55Q7Z7F7 128 aaKnown RBP8.13□□□□□ -1.11
LRRC47-202ENST00000462356 LINC00167Q96N53 147 aa8.13□□□□□ -1.11
LRRC47-202ENST00000462356 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
LRRC47-202ENST00000462356 REG3GQ6UW15 175 aa8.12□□□□□ -1.11
LRRC47-202ENST00000462356 LINC01600Q96MT4 127 aa8.12□□□□□ -1.11
LRRC47-202ENST00000462356 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
LRRC47-202ENST00000462356 DPM2O94777 84 aa8.11□□□□□ -1.11
LRRC47-202ENST00000462356 TSPEAR-AS2P59090 65 aa8.11□□□□□ -1.11
LRRC47-202ENST00000462356 NKAPP1Q8N9T2 125 aa8.11□□□□□ -1.11
LRRC47-202ENST00000462356 Q8NDZ9 215 aa8.11□□□□□ -1.11
LRRC47-202ENST00000462356 MAP1LC3CQ9BXW4 147 aa8.11□□□□□ -1.11
LRRC47-202ENST00000462356 IGKCP01834 107 aa8.1□□□□□ -1.11
LRRC47-202ENST00000462356 SMIM13P0DJ93 91 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms