RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CST9LQ9H4G1 147 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 IGLV4-69A0A075B6H9 119 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 TRAV12-1A0A0B4J245 112 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 TINCRA0A1B0GVN0 87 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 IFITM10A6NMD0 228 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 COX7A2LO14548 114 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 NUPR1O60356 82 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST1H2BKO60814 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 ATP6V1G1O75348 118 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST1H2BJP06899 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 IGLC3P0DOY3 106 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST1H2BOP23527 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST1H2BBP33778 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST1H2BDP58876 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST1H2BCP62807 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 SEC11AP67812 179 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 PMVKQ15126 192 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST2H2BEQ16778 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.65□□□□□ -1.83
VPS36-202ENST00000462289 ZC2HC1BQ5TFG8 222 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST1H2BHQ93079 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 PACRGQ96M98 296 aaPredicted RBP3.65□□□□□ -1.83
VPS36-202ENST00000462289 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST1H2BNQ99877 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 HIST1H2BMQ99879 126 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 VCX2Q9H322 139 aa3.65□□□□□ -1.83
VPS36-202ENST00000462289 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.64□□□□□ -1.83
VPS36-202ENST00000462289 hDV102S1A0JD36 115 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 SMIM1B2RUZ4 78 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.64□□□□□ -1.83
VPS36-202ENST00000462289 PANO1I0J062 215 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 SERF1AO75920 110 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 ATP5LO75964 103 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 TLX1NBP0CAT3 122 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 HERVK_113P63121 156 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 Q6ZN92 141 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 SPACA4Q8TDM5 124 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 C2orf88Q9BSF0 95 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 CHAC1Q9BUX1 264 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 MRPL35Q9NZE8 188 aaKnown RBP3.64□□□□□ -1.83
VPS36-202ENST00000462289 CDKN2A-AS1Q9UH64 79 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 ABCA13Q86UQ4 5058 aa3.64□□□□□ -1.83
VPS36-202ENST00000462289 IGKV3OR2-268A0A0C4DH90 116 aa3.63□□□□□ -1.83
VPS36-202ENST00000462289 A0A0J9YXV3 536 aa3.63□□□□□ -1.83
VPS36-202ENST00000462289 PMCHL1Q16048 86 aa3.63□□□□□ -1.83
VPS36-202ENST00000462289 C5orf38Q86SI9 138 aa3.63□□□□□ -1.83
VPS36-202ENST00000462289 Q8IZM0 81 aa3.63□□□□□ -1.83
VPS36-202ENST00000462289 PLAC8Q9NZF1 115 aa3.63□□□□□ -1.83
VPS36-202ENST00000462289 MYCBP2O75592 4640 aa3.63□□□□□ -1.83
VPS36-202ENST00000462289 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.62□□□□□ -1.83
VPS36-202ENST00000462289 APOMO95445 188 aa3.62□□□□□ -1.83
VPS36-202ENST00000462289 ZNF22P17026 224 aaPredicted RBP3.62□□□□□ -1.83
VPS36-202ENST00000462289 SYCNQ0VAF6 134 aa3.62□□□□□ -1.83
VPS36-202ENST00000462289 LINC01620Q4KN68 170 aa3.62□□□□□ -1.83
VPS36-202ENST00000462289 HIGD2BQ4VC39 106 aa3.62□□□□□ -1.83
VPS36-202ENST00000462289 Q6ZRU5 148 aa3.62□□□□□ -1.83
VPS36-202ENST00000462289 SCXQ7RTU7 201 aa3.62□□□□□ -1.83
VPS36-202ENST00000462289 CIRBP-AS1Q8TBR5 109 aa3.62□□□□□ -1.83
VPS36-202ENST00000462289 IFI27L1Q96BM0 104 aa3.62□□□□□ -1.83
VPS36-202ENST00000462289 FLG2Q5D862 2391 aaPredicted RBP3.62□□□□□ -1.83
VPS36-202ENST00000462289 TRBV30A0A0K0K1B3 111 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 C11orf86A6NJI1 115 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 F8VRH5 84 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 HSBP1O75506 76 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 SPAG11BQ08648 103 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 BAGE3Q86Y29 109 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 FAM19A2Q8N3H0 131 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 ORAOV1Q8WV07 137 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 LINC00526Q96FQ7 95 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 CARD19Q96LW7 228 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 C6orf48Q9UBA6 75 aa3.61□□□□□ -1.83
VPS36-202ENST00000462289 PKHD1L1Q86WI1 4243 aa3.6□□□□□ -1.83
VPS36-202ENST00000462289 A0A096LNI7 61 aa3.6□□□□□ -1.83
VPS36-202ENST00000462289 CXCL5P42830 114 aa3.6□□□□□ -1.83
VPS36-202ENST00000462289 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
VPS36-202ENST00000462289 KRTAP7-1Q8IUC3 87 aa3.6□□□□□ -1.83
VPS36-202ENST00000462289 PRR26Q8N8Z3 221 aa3.6□□□□□ -1.83
VPS36-202ENST00000462289 PKIGQ9Y2B9 76 aa3.6□□□□□ -1.83
VPS36-202ENST00000462289 PCLOQ9Y6V0 5065 aa3.6□□□□□ -1.83
VPS36-202ENST00000462289 A0A087WYN8 130 aa3.59□□□□□ -1.83
VPS36-202ENST00000462289 TMEM223A0PJW6 202 aa3.59□□□□□ -1.83
VPS36-202ENST00000462289 NDUFA1O15239 70 aa3.59□□□□□ -1.83
VPS36-202ENST00000462289 LEPROTL1O95214 131 aa3.59□□□□□ -1.83
VPS36-202ENST00000462289 UNQ6190/PRO20217Q6UXQ8 127 aa3.59□□□□□ -1.83
VPS36-202ENST00000462289 Q6ZRP5 223 aa3.59□□□□□ -1.83
VPS36-202ENST00000462289 ZNF625Q96I27 306 aaPredicted RBP3.59□□□□□ -1.83
VPS36-202ENST00000462289 CAMK2N2Q96S95 79 aa3.59□□□□□ -1.83
VPS36-202ENST00000462289 GEMIN7Q9H840 131 aaKnown RBP3.59□□□□□ -1.83
VPS36-202ENST00000462289 LINC00474Q9P2X8 69 aa3.59□□□□□ -1.83
VPS36-202ENST00000462289 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.83
VPS36-202ENST00000462289 LOC107984640A0A0U1RRK4 108 aa3.58□□□□□ -1.84
VPS36-202ENST00000462289 NDUFC2-KCTD14E9PQ53 114 aa3.58□□□□□ -1.84
VPS36-202ENST00000462289 CHTF8P0CG12 524 aa3.58□□□□□ -1.84
VPS36-202ENST00000462289 LINC01545Q5VT33 79 aa3.58□□□□□ -1.84
VPS36-202ENST00000462289 C2orf82Q6UX34 121 aa3.58□□□□□ -1.84
VPS36-202ENST00000462289 LINC00469Q8N7U9 141 aa3.58□□□□□ -1.84
VPS36-202ENST00000462289 HSPB8Q9UJY1 196 aa3.58□□□□□ -1.84
VPS36-202ENST00000462289 CHTOPQ9Y3Y2 248 aaKnown RBP3.58□□□□□ -1.84
VPS36-202ENST00000462289 H3BRM9 83 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms