RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ORMDL2Q53FV1 153 aa5.59□□□□□ -1.51
LDB1-203ENST00000461873 PAPPA-AS1Q5QFB9 102 aa5.59□□□□□ -1.51
LDB1-203ENST00000461873 TMEM141Q96I45 108 aa5.59□□□□□ -1.51
LDB1-203ENST00000461873 A0A096LNJ9 63 aa5.58□□□□□ -1.52
LDB1-203ENST00000461873 HNRNPA3P51991 378 aaKnown RBP5.58□□□□□ -1.52
LDB1-203ENST00000461873 RNF151Q2KHN1 245 aa5.58□□□□□ -1.52
LDB1-203ENST00000461873 SPINK6Q6UWN8 80 aa5.58□□□□□ -1.52
LDB1-203ENST00000461873 CHCHD1Q96BP2 118 aaKnown RBP5.58□□□□□ -1.52
LDB1-203ENST00000461873 PACRGQ96M98 296 aaPredicted RBP5.58□□□□□ -1.52
LDB1-203ENST00000461873 HIST1H2BLQ99880 126 aa5.58□□□□□ -1.52
LDB1-203ENST00000461873 VCX2Q9H322 139 aa5.58□□□□□ -1.52
LDB1-203ENST00000461873 CYSLTR1Q9Y271 337 aa5.58□□□□□ -1.52
LDB1-203ENST00000461873 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
LDB1-203ENST00000461873 LINC01546A6NGU7 62 aa5.57□□□□□ -1.52
LDB1-203ENST00000461873 K7EMI3 77 aa5.57□□□□□ -1.52
LDB1-203ENST00000461873 AKR1D1P51857 326 aa5.57□□□□□ -1.52
LDB1-203ENST00000461873 SEC11AP67812 179 aa5.57□□□□□ -1.52
LDB1-203ENST00000461873 ZC2HC1BQ5TFG8 222 aa5.57□□□□□ -1.52
LDB1-203ENST00000461873 OPRPNQ99935 248 aaPredicted RBP5.57□□□□□ -1.52
LDB1-203ENST00000461873 MRPL35Q9NZE8 188 aaKnown RBP5.57□□□□□ -1.52
LDB1-203ENST00000461873 PYGO1Q9Y3Y4 419 aa5.57□□□□□ -1.52
LDB1-203ENST00000461873 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
LDB1-203ENST00000461873 H0Y8G0 127 aa5.56□□□□□ -1.52
LDB1-203ENST00000461873 CKS1BP61024 79 aa5.56□□□□□ -1.52
LDB1-203ENST00000461873 C9orf116Q5BN46 136 aaPredicted RBP5.56□□□□□ -1.52
LDB1-203ENST00000461873 C2orf66Q6UXQ4 117 aa5.56□□□□□ -1.52
LDB1-203ENST00000461873 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 IGHV3OR16-9A0A0B4J2B5 98 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 A0A0J9YXV3 536 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.55□□□□□ -1.52
LDB1-203ENST00000461873 LEPROTL1O95214 131 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 HBDP02042 147 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 KRTDAPP60985 99 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 UBE2BP63146 152 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 GAGE2EQ4V326 116 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 SCGB3A1Q96QR1 104 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 GEMIN7Q9H840 131 aaKnown RBP5.55□□□□□ -1.52
LDB1-203ENST00000461873 TOMM7Q9P0U1 55 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 GAGE2DQ9UEU5 116 aa5.55□□□□□ -1.52
LDB1-203ENST00000461873 A0A087WZ39 114 aa5.54□□□□□ -1.52
LDB1-203ENST00000461873 NPSP0C0P6 89 aa5.54□□□□□ -1.52
LDB1-203ENST00000461873 C3orf79P0CE67 100 aa5.54□□□□□ -1.52
LDB1-203ENST00000461873 C6orf226Q5I0X4 101 aa5.54□□□□□ -1.52
LDB1-203ENST00000461873 C1orf137Q5JT78 98 aa5.54□□□□□ -1.52
LDB1-203ENST00000461873 TOMM6Q96B49 74 aa5.54□□□□□ -1.52
LDB1-203ENST00000461873 IGLV4-3A0A075B6K6 122 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 TRBV30A0A0K0K1B3 111 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 LINC01549A6NIU2 74 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 HERVK_113P63121 156 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 LINC00242Q5T6M2 205 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 IFI27L1Q96BM0 104 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 LINC01600Q96MT4 127 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 PMCHL2Q9BQD1 86 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
LDB1-203ENST00000461873 A0A1W2PNN7 141 aa5.52□□□□□ -1.53
LDB1-203ENST00000461873 UNQ6190/PRO20217Q6UXQ8 127 aa5.52□□□□□ -1.53
LDB1-203ENST00000461873 PHF5AQ7RTV0 110 aaKnown RBP5.52□□□□□ -1.53
LDB1-203ENST00000461873 FAM19A5Q7Z5A7 132 aaPredicted RBP5.52□□□□□ -1.53
LDB1-203ENST00000461873 LINC01561Q8N1V8 128 aa5.52□□□□□ -1.53
LDB1-203ENST00000461873 HSPB8Q9UJY1 196 aa5.52□□□□□ -1.53
LDB1-203ENST00000461873 IGIPA6NJ69 53 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 NDUFC2-KCTD14E9PQ53 114 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 SCGB1D1O95968 90 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 TLX1NBP0CAT3 122 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 UBE2D1P51668 147 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 ERASQ7Z444 233 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 DIRC1Q969H9 104 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 FAM104AQ969W3 186 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 MAP1LC3CQ9BXW4 147 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 C6orf48Q9UBA6 75 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 PSORS1C2Q9UIG4 136 aa5.51□□□□□ -1.53
LDB1-203ENST00000461873 SYS1-DBNDD2H3BUS1 97 aa5.5□□□□□ -1.53
LDB1-203ENST00000461873 ATP5LO75964 103 aa5.5□□□□□ -1.53
LDB1-203ENST00000461873 GHRHP01286 108 aa5.5□□□□□ -1.53
LDB1-203ENST00000461873 ATOH7Q8N100 152 aa5.5□□□□□ -1.53
LDB1-203ENST00000461873 M0QXV9 152 aa5.49□□□□□ -1.53
LDB1-203ENST00000461873 CXCL5P42830 114 aa5.49□□□□□ -1.53
LDB1-203ENST00000461873 LBHQ53QV2 105 aaPredicted RBP5.49□□□□□ -1.53
LDB1-203ENST00000461873 PYY3Q5JQD4 70 aa5.49□□□□□ -1.53
LDB1-203ENST00000461873 C10orf25Q5T742 122 aa5.49□□□□□ -1.53
LDB1-203ENST00000461873 C2orf82Q6UX34 121 aa5.49□□□□□ -1.53
LDB1-203ENST00000461873 Q8IZM0 81 aa5.49□□□□□ -1.53
LDB1-203ENST00000461873 LINC00469Q8N7U9 141 aa5.49□□□□□ -1.53
LDB1-203ENST00000461873 AMELXQ99217 191 aa5.49□□□□□ -1.53
LDB1-203ENST00000461873 TIMM17AQ99595 171 aa5.49□□□□□ -1.53
LDB1-203ENST00000461873 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
LDB1-203ENST00000461873 ODF1Q14990 250 aa5.48□□□□□ -1.53
LDB1-203ENST00000461873 HMCN2Q8NDA2 5059 aa5.47□□□□□ -1.53
LDB1-203ENST00000461873 FAM168BA1KXE4 195 aa5.47□□□□□ -1.53
LDB1-203ENST00000461873 F8VRH5 84 aa5.47□□□□□ -1.53
LDB1-203ENST00000461873 H3BRM9 83 aa5.47□□□□□ -1.53
LDB1-203ENST00000461873 IGLV7-43P04211 117 aa5.47□□□□□ -1.53
LDB1-203ENST00000461873 SRSF9Q13242 221 aaKnown RBP eCLIP5.47□□□□□ -1.53
LDB1-203ENST00000461873 JOSD1Q15040 202 aaPredicted RBP5.47□□□□□ -1.53
LDB1-203ENST00000461873 PET117Q6UWS5 81 aa5.47□□□□□ -1.53
LDB1-203ENST00000461873 CST9LQ9H4G1 147 aa5.47□□□□□ -1.53
LDB1-203ENST00000461873 CHTOPQ9Y3Y2 248 aaKnown RBP5.47□□□□□ -1.53
LDB1-203ENST00000461873 KIAA0087Q14695 138 aa5.46□□□□□ -1.54
LDB1-203ENST00000461873 PMVKQ15126 192 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms