RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 LYPD5Q6UWN5 251 aa6.38□□□□□ -1.39
BRCA1-205ENST00000461221 C16orf95Q9H693 158 aa6.38□□□□□ -1.39
BRCA1-205ENST00000461221 COX8CQ7Z4L0 72 aa6.38□□□□□ -1.39
BRCA1-205ENST00000461221 ZNF580Q9UK33 172 aa6.38□□□□□ -1.39
BRCA1-205ENST00000461221 SMIM29Q86T20 159 aa6.37□□□□□ -1.39
BRCA1-205ENST00000461221 VPREB1P12018 145 aa6.37□□□□□ -1.39
BRCA1-205ENST00000461221 LINC00310P59036 64 aa6.37□□□□□ -1.39
BRCA1-205ENST00000461221 A0A1B0GW54 56 aa6.37□□□□□ -1.39
BRCA1-205ENST00000461221 H3BPC8 53 aa6.37□□□□□ -1.39
BRCA1-205ENST00000461221 Q6ZRU5 148 aa6.37□□□□□ -1.39
BRCA1-205ENST00000461221 C22orf24Q9Y442 160 aa6.36□□□□□ -1.39
BRCA1-205ENST00000461221 EDN2P20800 178 aa6.36□□□□□ -1.39
BRCA1-205ENST00000461221 KIAA1549Q9HCM3 1950 aa6.36□□□□□ -1.39
BRCA1-205ENST00000461221 PLA2G1BP04054 148 aaKnown RBP6.35□□□□□ -1.39
BRCA1-205ENST00000461221 PLA2G2AP14555 144 aa6.35□□□□□ -1.39
BRCA1-205ENST00000461221 C6orf48Q9UBA6 75 aa6.35□□□□□ -1.39
BRCA1-205ENST00000461221 NHLRC4P0CG21 123 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-205ENST00000461221 MED12LQ86YW9 2145 aa6.34□□□□□ -1.39
BRCA1-205ENST00000461221 KIAA0087Q14695 138 aa6.34□□□□□ -1.39
BRCA1-205ENST00000461221 Q9UF83 564 aa6.34□□□□□ -1.4
BRCA1-205ENST00000461221 DSCAMO60469 2012 aa6.33□□□□□ -1.4
BRCA1-205ENST00000461221 C8orf87E5RJ46 101 aa6.33□□□□□ -1.4
BRCA1-205ENST00000461221 PTPRQQ9UMZ3 2332 aa6.33□□□□□ -1.4
BRCA1-205ENST00000461221 AVPP01185 164 aa6.33□□□□□ -1.4
BRCA1-205ENST00000461221 PRR14LQ5THK1 2151 aa6.33□□□□□ -1.4
BRCA1-205ENST00000461221 SPATA3Q8NHX4 192 aa6.33□□□□□ -1.4
BRCA1-205ENST00000461221 FAM208BQ5VWN6 2430 aa6.32□□□□□ -1.4
BRCA1-205ENST00000461221 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
BRCA1-205ENST00000461221 FREM1Q5H8C1 2179 aa6.32□□□□□ -1.4
BRCA1-205ENST00000461221 Q6ZSN1 163 aa6.32□□□□□ -1.4
BRCA1-205ENST00000461221 A8MTW9 85 aa6.32□□□□□ -1.4
BRCA1-205ENST00000461221 ATP11AUNQ6ZP68 121 aa6.32□□□□□ -1.4
BRCA1-205ENST00000461221 SORL1Q92673 2214 aa6.31□□□□□ -1.4
BRCA1-205ENST00000461221 SPACA4Q8TDM5 124 aa6.31□□□□□ -1.4
BRCA1-205ENST00000461221 PRRC2AP48634 2157 aaKnown RBP6.31□□□□□ -1.4
BRCA1-205ENST00000461221 NUP210LQ5VU65 1888 aa6.31□□□□□ -1.4
BRCA1-205ENST00000461221 KIAA1549LQ6ZVL6 1849 aa6.31□□□□□ -1.4
BRCA1-205ENST00000461221 A0A096LNJ9 63 aa6.3□□□□□ -1.4
BRCA1-205ENST00000461221 MOBPQ13875 183 aa6.3□□□□□ -1.4
BRCA1-205ENST00000461221 C11orf72Q8NBR9 251 aa6.3□□□□□ -1.4
BRCA1-205ENST00000461221 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
BRCA1-205ENST00000461221 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
BRCA1-205ENST00000461221 WNK1Q9H4A3 2382 aa6.29□□□□□ -1.4
BRCA1-205ENST00000461221 CDIP1Q9H305 208 aa6.29□□□□□ -1.4
BRCA1-205ENST00000461221 C2orf16Q68DN1 1984 aa6.29□□□□□ -1.4
BRCA1-205ENST00000461221 Q8NBF4 154 aa6.28□□□□□ -1.4
BRCA1-205ENST00000461221 SMR3AQ99954 134 aa6.28□□□□□ -1.4
BRCA1-205ENST00000461221 LINC00167Q96N53 147 aa6.28□□□□□ -1.4
BRCA1-205ENST00000461221 LINC00313P59037 77 aa6.27□□□□□ -1.41
BRCA1-205ENST00000461221 TRAV22A0A0B4J277 110 aa6.27□□□□□ -1.41
BRCA1-205ENST00000461221 KIF25-AS1Q9Y6Z4 181 aa6.27□□□□□ -1.41
BRCA1-205ENST00000461221 FHL3Q13643 280 aa6.27□□□□□ -1.41
BRCA1-205ENST00000461221 ELOF1P60002 83 aaKnown RBP6.26□□□□□ -1.41
BRCA1-205ENST00000461221 LINC01546A6NGU7 62 aa6.26□□□□□ -1.41
BRCA1-205ENST00000461221 LOC110117498A0A087WWA1 95 aa6.25□□□□□ -1.41
BRCA1-205ENST00000461221 TANC2Q9HCD6 1990 aa6.25□□□□□ -1.41
BRCA1-205ENST00000461221 HCFC1P51610 2035 aa6.24□□□□□ -1.41
BRCA1-205ENST00000461221 LOC101927531A0A1B0GV80 90 aa6.24□□□□□ -1.41
BRCA1-205ENST00000461221 IGHV3OR16-9A0A0B4J2B5 98 aa6.24□□□□□ -1.41
BRCA1-205ENST00000461221 MDFIQ99750 246 aa6.24□□□□□ -1.41
BRCA1-205ENST00000461221 ANKHD1Q8IWZ3 2542 aaKnown RBP6.24□□□□□ -1.41
BRCA1-205ENST00000461221 PLXNB1O43157 2135 aa6.24□□□□□ -1.41
BRCA1-205ENST00000461221 ARHGAP32A7KAX9 2087 aa6.24□□□□□ -1.41
BRCA1-205ENST00000461221 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
BRCA1-205ENST00000461221 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
BRCA1-205ENST00000461221 Q6ZQT0 140 aa6.23□□□□□ -1.41
BRCA1-205ENST00000461221 LINC00476Q8WZB0 136 aa6.23□□□□□ -1.41
BRCA1-205ENST00000461221 CDSNQ15517 529 aa6.23□□□□□ -1.41
BRCA1-205ENST00000461221 ATG2AQ2TAZ0 1938 aa6.23□□□□□ -1.41
BRCA1-205ENST00000461221 LTBP2Q14767 1821 aa6.23□□□□□ -1.41
BRCA1-205ENST00000461221 H3BNG1 76 aa6.22□□□□□ -1.41
BRCA1-205ENST00000461221 KRTAP10-9P60411 292 aa6.22□□□□□ -1.41
BRCA1-205ENST00000461221 Q6ZRX8 168 aa6.22□□□□□ -1.41
BRCA1-205ENST00000461221 TYMSOSQ8TAI1 123 aa6.22□□□□□ -1.41
BRCA1-205ENST00000461221 EML5Q05BV3 1969 aa6.21□□□□□ -1.41
BRCA1-205ENST00000461221 Q6ZRP5 223 aa6.21□□□□□ -1.41
BRCA1-205ENST00000461221 TECTAO75443 2155 aa6.21□□□□□ -1.41
BRCA1-205ENST00000461221 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
BRCA1-205ENST00000461221 SSBP3-AS1Q7Z2R9 100 aa6.21□□□□□ -1.42
BRCA1-205ENST00000461221 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
BRCA1-205ENST00000461221 IGLV8-61A0A075B6I0 122 aa6.2□□□□□ -1.42
BRCA1-205ENST00000461221 EPM2AB3EWF7 344 aa6.19□□□□□ -1.42
BRCA1-205ENST00000461221 LINC01600Q96MT4 127 aa6.19□□□□□ -1.42
BRCA1-205ENST00000461221 Q96NJ1 140 aa6.19□□□□□ -1.42
BRCA1-205ENST00000461221 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
BRCA1-205ENST00000461221 PHF5AQ7RTV0 110 aaKnown RBP6.18□□□□□ -1.42
BRCA1-205ENST00000461221 PCDH15Q96QU1 1955 aa6.18□□□□□ -1.42
BRCA1-205ENST00000461221 MUC6Q6W4X9 2439 aa6.18□□□□□ -1.42
BRCA1-205ENST00000461221 C16orf90A8MZG2 172 aa6.18□□□□□ -1.42
BRCA1-205ENST00000461221 UQCR11O14957 56 aa6.18□□□□□ -1.42
BRCA1-205ENST00000461221 RTL8CO15255 209 aa6.18□□□□□ -1.42
BRCA1-205ENST00000461221 FAM218AQ96MZ4 157 aa6.18□□□□□ -1.42
BRCA1-205ENST00000461221 ZFHX2Q9C0A1 2572 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-205ENST00000461221 TRBV7-4A0A0J9YYF1 115 aa6.17□□□□□ -1.42
BRCA1-205ENST00000461221 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
BRCA1-205ENST00000461221 SMCPP49901 116 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-205ENST00000461221 PCNX3Q9H6A9 2034 aa6.17□□□□□ -1.42
BRCA1-205ENST00000461221 TM2D3Q9BRN9 247 aa6.17□□□□□ -1.42
BRCA1-205ENST00000461221 A8MWP4 228 aa6.16□□□□□ -1.42
BRCA1-205ENST00000461221 CSPG4Q6UVK1 2322 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms