RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 ATP5LO75964 103 aa12.87□□□□□ -0.35
SCAF8-204ENST00000461219 C9orf116Q5BN46 136 aaPredicted RBP12.87□□□□□ -0.35
SCAF8-204ENST00000461219 YPEL4Q96NS1 127 aa12.87□□□□□ -0.35
SCAF8-204ENST00000461219 TLX1NBP0CAT3 122 aa12.86□□□□□ -0.35
SCAF8-204ENST00000461219 URB1-AS1Q96HZ7 61 aa12.86□□□□□ -0.35
SCAF8-204ENST00000461219 DMBT1Q9UGM3 2413 aaPredicted RBP12.86□□□□□ -0.35
SCAF8-204ENST00000461219 CXCL5P42830 114 aa12.85□□□□□ -0.35
SCAF8-204ENST00000461219 Q6ZRP5 223 aa12.85□□□□□ -0.35
SCAF8-204ENST00000461219 NDUFC2-KCTD14E9PQ53 114 aa12.84□□□□□ -0.35
SCAF8-204ENST00000461219 PDZD11Q5EBL8 140 aa12.84□□□□□ -0.35
SCAF8-204ENST00000461219 BAGE3Q86Y29 109 aa12.84□□□□□ -0.35
SCAF8-204ENST00000461219 CHCHD1Q96BP2 118 aaKnown RBP12.84□□□□□ -0.35
SCAF8-204ENST00000461219 A0A096LNJ9 63 aa12.83□□□□□ -0.36
SCAF8-204ENST00000461219 A0A1W2PNN7 141 aa12.83□□□□□ -0.36
SCAF8-204ENST00000461219 SPINK8P0C7L1 97 aa12.83□□□□□ -0.36
SCAF8-204ENST00000461219 PRR3P79522 188 aaKnown RBP12.83□□□□□ -0.36
SCAF8-204ENST00000461219 COX7B2Q8TF08 81 aa12.83□□□□□ -0.36
SCAF8-204ENST00000461219 KRTAP29-1A8MX34 341 aaPredicted RBP12.82□□□□□ -0.36
SCAF8-204ENST00000461219 SMIM1B2RUZ4 78 aa12.82□□□□□ -0.36
SCAF8-204ENST00000461219 F8VRH5 84 aa12.82□□□□□ -0.36
SCAF8-204ENST00000461219 HNRNPA3P51991 378 aaKnown RBP12.82□□□□□ -0.36
SCAF8-204ENST00000461219 FAM19A5Q7Z5A7 132 aaPredicted RBP12.82□□□□□ -0.36
SCAF8-204ENST00000461219 IGLV5-45A0A087WSX0 123 aa12.81□□□□□ -0.36
SCAF8-204ENST00000461219 HSBP1O75506 76 aa12.81□□□□□ -0.36
SCAF8-204ENST00000461219 OXTP01178 125 aa12.81□□□□□ -0.36
SCAF8-204ENST00000461219 TRGC2P03986 189 aa12.81□□□□□ -0.36
SCAF8-204ENST00000461219 MYCBP2O75592 4640 aa12.79□□□□□ -0.36
SCAF8-204ENST00000461219 IGLC3P0DOY3 106 aa12.79□□□□□ -0.36
SCAF8-204ENST00000461219 FAM168BA1KXE4 195 aa12.78□□□□□ -0.36
SCAF8-204ENST00000461219 PHF5AQ7RTV0 110 aaKnown RBP12.78□□□□□ -0.36
SCAF8-204ENST00000461219 TMEM170BQ5T4T1 132 aa12.76□□□□□ -0.37
SCAF8-204ENST00000461219 IFI27L1Q96BM0 104 aa12.76□□□□□ -0.37
SCAF8-204ENST00000461219 CHTOPQ9Y3Y2 248 aaKnown RBP12.76□□□□□ -0.37
SCAF8-204ENST00000461219 M0QXV9 152 aa12.75□□□□□ -0.37
SCAF8-204ENST00000461219 UBE2BP63146 152 aa12.75□□□□□ -0.37
SCAF8-204ENST00000461219 ZNF22P17026 224 aaPredicted RBP12.74□□□□□ -0.37
SCAF8-204ENST00000461219 FAM19A2Q8N3H0 131 aa12.73□□□□□ -0.37
SCAF8-204ENST00000461219 XAGE1AQ9HD64 81 aa12.73□□□□□ -0.37
SCAF8-204ENST00000461219 C1orf137Q5JT78 98 aa12.72□□□□□ -0.37
SCAF8-204ENST00000461219 C9orf129Q5T035 196 aaKnown RBP12.72□□□□□ -0.37
SCAF8-204ENST00000461219 PSORS1C2Q9UIG4 136 aa12.72□□□□□ -0.37
SCAF8-204ENST00000461219 C11orf86A6NJI1 115 aa12.71□□□□□ -0.37
SCAF8-204ENST00000461219 H0Y8G0 127 aa12.71□□□□□ -0.37
SCAF8-204ENST00000461219 PKHD1L1Q86WI1 4243 aa12.71□□□□□ -0.38
SCAF8-204ENST00000461219 SPINK6Q6UWN8 80 aa12.7□□□□□ -0.38
SCAF8-204ENST00000461219 TRAV12-1A0A0B4J245 112 aa12.69□□□□□ -0.38
SCAF8-204ENST00000461219 COLCA2A8K830 154 aa12.69□□□□□ -0.38
SCAF8-204ENST00000461219 SERF1AO75920 110 aa12.69□□□□□ -0.38
SCAF8-204ENST00000461219 LEPROTL1O95214 131 aa12.68□□□□□ -0.38
SCAF8-204ENST00000461219 REG3GQ6UW15 175 aa12.68□□□□□ -0.38
SCAF8-204ENST00000461219 IGLV5-39A0A0G2JS06 123 aa12.67□□□□□ -0.38
SCAF8-204ENST00000461219 PFN2P35080 140 aa12.66□□□□□ -0.38
SCAF8-204ENST00000461219 LBHQ53QV2 105 aaPredicted RBP12.66□□□□□ -0.38
SCAF8-204ENST00000461219 SFTA2Q6UW10 78 aa12.66□□□□□ -0.38
SCAF8-204ENST00000461219 HSPB8Q9UJY1 196 aa12.65□□□□□ -0.38
SCAF8-204ENST00000461219 SCO1O75880 301 aa12.64□□□□□ -0.39
SCAF8-204ENST00000461219 FABP4P15090 132 aa12.63□□□□□ -0.39
SCAF8-204ENST00000461219 SERTAD4-AS1Q5TG53 156 aa12.63□□□□□ -0.39
SCAF8-204ENST00000461219 ZNF625Q96I27 306 aaPredicted RBP12.63□□□□□ -0.39
SCAF8-204ENST00000461219 C22orf24Q9Y442 160 aa12.63□□□□□ -0.39
SCAF8-204ENST00000461219 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
SCAF8-204ENST00000461219 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
SCAF8-204ENST00000461219 NKAPP1Q8N9T2 125 aa12.61□□□□□ -0.39
SCAF8-204ENST00000461219 LRP1Q07954 4544 aaKnown RBP12.61□□□□□ -0.39
SCAF8-204ENST00000461219 TMEM223A0PJW6 202 aa12.6□□□□□ -0.39
SCAF8-204ENST00000461219 IGLV7-43P04211 117 aa12.6□□□□□ -0.39
SCAF8-204ENST00000461219 MRPL55Q7Z7F7 128 aaKnown RBP12.6□□□□□ -0.39
SCAF8-204ENST00000461219 SRSF9Q13242 221 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCAF8-204ENST00000461219 COX17Q14061 63 aa12.59□□□□□ -0.39
SCAF8-204ENST00000461219 HERC1Q15751 4861 aa12.59□□□□□ -0.39
SCAF8-204ENST00000461219 ATP6V1G1O75348 118 aa12.58□□□□□ -0.4
SCAF8-204ENST00000461219 LINC00310P59036 64 aa12.58□□□□□ -0.4
SCAF8-204ENST00000461219 FAT3Q8TDW7 4589 aa12.58□□□□□ -0.4
SCAF8-204ENST00000461219 DIRC1Q969H9 104 aa12.58□□□□□ -0.4
SCAF8-204ENST00000461219 TP73-AS1Q9UF72 201 aa12.58□□□□□ -0.4
SCAF8-204ENST00000461219 PLNP26678 52 aa12.57□□□□□ -0.4
SCAF8-204ENST00000461219 ODF1Q14990 250 aa12.57□□□□□ -0.4
SCAF8-204ENST00000461219 KRTAP11-1Q8IUC1 163 aa12.57□□□□□ -0.4
SCAF8-204ENST00000461219 NUPR1O60356 82 aa12.56□□□□□ -0.4
SCAF8-204ENST00000461219 LINC00158P58513 81 aa12.56□□□□□ -0.4
SCAF8-204ENST00000461219 LINC01600Q96MT4 127 aa12.56□□□□□ -0.4
SCAF8-204ENST00000461219 MAP1LC3CQ9BXW4 147 aa12.56□□□□□ -0.4
SCAF8-204ENST00000461219 PLA2G2DQ9UNK4 145 aa12.56□□□□□ -0.4
SCAF8-204ENST00000461219 GAGE10A6NGK3 116 aa12.54□□□□□ -0.4
SCAF8-204ENST00000461219 HERVK_113P61574 105 aa12.54□□□□□ -0.4
SCAF8-204ENST00000461219 MEIG1Q5JSS6 88 aa12.54□□□□□ -0.4
SCAF8-204ENST00000461219 SND1-IT1Q9HBX3 110 aa12.54□□□□□ -0.4
SCAF8-204ENST00000461219 RPL37AP8A6NKH3 93 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST1H2BKO60814 126 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 DPM2O94777 84 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST1H2BJP06899 126 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST1H2BOP23527 126 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST1H2BBP33778 126 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST1H2BDP58876 126 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST1H2BCP62807 126 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 RPL24P83731 157 aaKnown RBP12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST2H2BEQ16778 126 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST1H2BHQ93079 126 aa12.53□□□□□ -0.4
SCAF8-204ENST00000461219 HIST1H2BNQ99877 126 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms