RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
COL5A3-202ENST00000461214 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
COL5A3-202ENST00000461214 NDUFA1O15239 70 aa9.38□□□□□ -0.91
COL5A3-202ENST00000461214 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
COL5A3-202ENST00000461214 TOMM7Q9P0U1 55 aa9.38□□□□□ -0.91
COL5A3-202ENST00000461214 E9PLD3 99 aa9.37□□□□□ -0.91
COL5A3-202ENST00000461214 CARD19Q96LW7 228 aa9.37□□□□□ -0.91
COL5A3-202ENST00000461214 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
COL5A3-202ENST00000461214 PKIGQ9Y2B9 76 aa9.37□□□□□ -0.91
COL5A3-202ENST00000461214 DMBT1Q9UGM3 2413 aaPredicted RBP9.36□□□□□ -0.91
COL5A3-202ENST00000461214 LEPROTO15243 131 aa9.36□□□□□ -0.91
COL5A3-202ENST00000461214 SCGB1D1O95968 90 aa9.36□□□□□ -0.91
COL5A3-202ENST00000461214 CKS1BP61024 79 aa9.36□□□□□ -0.91
COL5A3-202ENST00000461214 SYCNQ0VAF6 134 aa9.36□□□□□ -0.91
COL5A3-202ENST00000461214 JOSD1Q15040 202 aaPredicted RBP9.36□□□□□ -0.91
COL5A3-202ENST00000461214 C6orf226Q5I0X4 101 aa9.36□□□□□ -0.91
COL5A3-202ENST00000461214 PLEKHB2Q96CS7 222 aa9.36□□□□□ -0.91
COL5A3-202ENST00000461214 IGLV5-52A0A0A0MRZ9 124 aa9.35□□□□□ -0.91
COL5A3-202ENST00000461214 TRBV30A0A0K0K1B3 111 aa9.35□□□□□ -0.91
COL5A3-202ENST00000461214 INAFM2P0DMQ5 153 aa9.35□□□□□ -0.91
COL5A3-202ENST00000461214 RNF151Q2KHN1 245 aa9.35□□□□□ -0.91
COL5A3-202ENST00000461214 LINC00526Q96FQ7 95 aa9.35□□□□□ -0.91
COL5A3-202ENST00000461214 KRTAP10-2P60368 255 aa9.34□□□□□ -0.91
COL5A3-202ENST00000461214 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
COL5A3-202ENST00000461214 C9orf163Q8N9P6 203 aa9.34□□□□□ -0.91
COL5A3-202ENST00000461214 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
COL5A3-202ENST00000461214 HSBP1L1C9JCN9 74 aa9.33□□□□□ -0.92
COL5A3-202ENST00000461214 J3QQQ9 107 aa9.33□□□□□ -0.92
COL5A3-202ENST00000461214 SLPIP03973 132 aa9.33□□□□□ -0.92
COL5A3-202ENST00000461214 NMUP48645 174 aa9.33□□□□□ -0.92
COL5A3-202ENST00000461214 Q6ZRU5 148 aa9.33□□□□□ -0.92
COL5A3-202ENST00000461214 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
COL5A3-202ENST00000461214 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
COL5A3-202ENST00000461214 STPG4Q8N801 248 aa9.32□□□□□ -0.92
COL5A3-202ENST00000461214 ZNF625Q96I27 306 aaPredicted RBP9.32□□□□□ -0.92
COL5A3-202ENST00000461214 HERV-K104P63124 156 aa9.31□□□□□ -0.92
COL5A3-202ENST00000461214 UNQ6190/PRO20217Q6UXQ8 127 aa9.31□□□□□ -0.92
COL5A3-202ENST00000461214 TSPEAR-AS2P59090 65 aa9.3□□□□□ -0.92
COL5A3-202ENST00000461214 PYY3Q5JQD4 70 aa9.3□□□□□ -0.92
COL5A3-202ENST00000461214 C6orf48Q9UBA6 75 aa9.3□□□□□ -0.92
COL5A3-202ENST00000461214 NDUFA12Q9UI09 145 aa9.3□□□□□ -0.92
COL5A3-202ENST00000461214 LRP1BQ9NZR2 4599 aa9.3□□□□□ -0.92
COL5A3-202ENST00000461214 MYMXA0A1B0GTQ4 84 aa9.29□□□□□ -0.92
COL5A3-202ENST00000461214 TLX1NBP0CAT3 122 aa9.29□□□□□ -0.92
COL5A3-202ENST00000461214 ANKRD39Q53RE8 183 aa9.29□□□□□ -0.92
COL5A3-202ENST00000461214 C10orf25Q5T742 122 aa9.29□□□□□ -0.92
COL5A3-202ENST00000461214 APOBP04114 4563 aaKnown RBP9.29□□□□□ -0.92
COL5A3-202ENST00000461214 IGKV2D-26A0A0A0MRZ7 120 aa9.28□□□□□ -0.92
COL5A3-202ENST00000461214 LOC107984640A0A0U1RRK4 108 aa9.28□□□□□ -0.92
COL5A3-202ENST00000461214 GCSHP23434 173 aa9.28□□□□□ -0.92
COL5A3-202ENST00000461214 COX17Q14061 63 aa9.27□□□□□ -0.93
COL5A3-202ENST00000461214 VAMP8Q9BV40 100 aa9.27□□□□□ -0.93
COL5A3-202ENST00000461214 LINC00587B1AMM8 73 aa9.26□□□□□ -0.93
COL5A3-202ENST00000461214 NDUFC2-KCTD14E9PQ53 114 aa9.26□□□□□ -0.93
COL5A3-202ENST00000461214 MAJINQ3KP22 176 aa9.26□□□□□ -0.93
COL5A3-202ENST00000461214 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
COL5A3-202ENST00000461214 LOC105371267A0A1B0GV96 52 aa9.25□□□□□ -0.93
COL5A3-202ENST00000461214 SMIM6P0DI80 62 aa9.25□□□□□ -0.93
COL5A3-202ENST00000461214 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
COL5A3-202ENST00000461214 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
COL5A3-202ENST00000461214 ZNF815PA8K554 130 aa9.24□□□□□ -0.93
COL5A3-202ENST00000461214 LINC00474Q9P2X8 69 aa9.24□□□□□ -0.93
COL5A3-202ENST00000461214 RPL18AQ02543 176 aaKnown RBP9.23□□□□□ -0.93
COL5A3-202ENST00000461214 LINC01620Q4KN68 170 aa9.23□□□□□ -0.93
COL5A3-202ENST00000461214 C9orf116Q5BN46 136 aaPredicted RBP9.23□□□□□ -0.93
COL5A3-202ENST00000461214 PTTG1IPP53801 180 aa9.22□□□□□ -0.93
COL5A3-202ENST00000461214 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
COL5A3-202ENST00000461214 SPATA45Q537H7 98 aa9.22□□□□□ -0.93
COL5A3-202ENST00000461214 MEIG1Q5JSS6 88 aa9.22□□□□□ -0.93
COL5A3-202ENST00000461214 Q6ZSA8 131 aa9.22□□□□□ -0.93
COL5A3-202ENST00000461214 PAM16Q9Y3D7 125 aa9.22□□□□□ -0.93
COL5A3-202ENST00000461214 A0A096LNI7 61 aa9.21□□□□□ -0.94
COL5A3-202ENST00000461214 A0A0J9YXY3 114 aa9.21□□□□□ -0.94
COL5A3-202ENST00000461214 KRTAP10-1P60331 282 aa9.21□□□□□ -0.94
COL5A3-202ENST00000461214 Q6ZRP5 223 aa9.21□□□□□ -0.94
COL5A3-202ENST00000461214 DNAH5Q8TE73 4624 aa9.2□□□□□ -0.94
COL5A3-202ENST00000461214 J3QL48 77 aa9.2□□□□□ -0.94
COL5A3-202ENST00000461214 TIMM17BO60830 172 aa9.2□□□□□ -0.94
COL5A3-202ENST00000461214 PFN2P35080 140 aa9.2□□□□□ -0.94
COL5A3-202ENST00000461214 S100A12P80511 92 aa9.2□□□□□ -0.94
COL5A3-202ENST00000461214 PCP2Q8IVA1 136 aa9.2□□□□□ -0.94
COL5A3-202ENST00000461214 SPACA4Q8TDM5 124 aa9.2□□□□□ -0.94
COL5A3-202ENST00000461214 TTTY13Q9BZ97 58 aa9.2□□□□□ -0.94
COL5A3-202ENST00000461214 COX8AP10176 69 aa9.19□□□□□ -0.94
COL5A3-202ENST00000461214 Q5VSD8 79 aa9.19□□□□□ -0.94
COL5A3-202ENST00000461214 IGKV2-24A0A0C4DH68 120 aa9.18□□□□□ -0.94
COL5A3-202ENST00000461214 DLEU1O43261 78 aa9.18□□□□□ -0.94
COL5A3-202ENST00000461214 LINC00158P58513 81 aa9.18□□□□□ -0.94
COL5A3-202ENST00000461214 GAGE2BQ13066 116 aa9.18□□□□□ -0.94
COL5A3-202ENST00000461214 SCGB1D4Q6XE38 83 aa9.18□□□□□ -0.94
COL5A3-202ENST00000461214 BOD1L2Q8IYS8 172 aa9.18□□□□□ -0.94
COL5A3-202ENST00000461214 TMEM238C9JI98 176 aa9.17□□□□□ -0.94
COL5A3-202ENST00000461214 SMIM13P0DJ93 91 aa9.17□□□□□ -0.94
COL5A3-202ENST00000461214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.17□□□□□ -0.94
COL5A3-202ENST00000461214 CHTF8P0CG12 524 aa9.16□□□□□ -0.94
COL5A3-202ENST00000461214 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
COL5A3-202ENST00000461214 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
COL5A3-202ENST00000461214 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
COL5A3-202ENST00000461214 FLG2Q5D862 2391 aaPredicted RBP9.15□□□□□ -0.94
COL5A3-202ENST00000461214 MIR7-3HGQ8N6C7 128 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms