RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 KIAA0087Q14695 138 aa14.48□□□□□ -0.09
C9orf3-209ENST00000460573 SDIM1Q6ZPB5 146 aa14.48□□□□□ -0.09
C9orf3-209ENST00000460573 F8VRH5 84 aa14.47□□□□□ -0.09
C9orf3-209ENST00000460573 NDUFA1O15239 70 aa14.47□□□□□ -0.09
C9orf3-209ENST00000460573 PRSS2P07478 247 aa14.47□□□□□ -0.09
C9orf3-209ENST00000460573 Q8IZM0 81 aa14.47□□□□□ -0.09
C9orf3-209ENST00000460573 SMIM1B2RUZ4 78 aa14.46□□□□□ -0.09
C9orf3-209ENST00000460573 RNF151Q2KHN1 245 aa14.46□□□□□ -0.09
C9orf3-209ENST00000460573 Q6ZSA8 131 aa14.46□□□□□ -0.09
C9orf3-209ENST00000460573 C12orf57Q99622 126 aa14.46□□□□□ -0.09
C9orf3-209ENST00000460573 ZNF22P17026 224 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-209ENST00000460573 C6orf226Q5I0X4 101 aa14.45□□□□□ -0.1
C9orf3-209ENST00000460573 Q6ZRU5 148 aa14.45□□□□□ -0.1
C9orf3-209ENST00000460573 MRPL35Q9NZE8 188 aaKnown RBP14.45□□□□□ -0.1
C9orf3-209ENST00000460573 C11orf86A6NJI1 115 aa14.44□□□□□ -0.1
C9orf3-209ENST00000460573 TOMM7Q9P0U1 55 aa14.44□□□□□ -0.1
C9orf3-209ENST00000460573 H0Y8G0 127 aa14.43□□□□□ -0.1
C9orf3-209ENST00000460573 XGP55808 180 aa14.43□□□□□ -0.1
C9orf3-209ENST00000460573 ODF1Q14990 250 aa14.43□□□□□ -0.1
C9orf3-209ENST00000460573 FAM30AQ9NZY2 134 aa14.43□□□□□ -0.1
C9orf3-209ENST00000460573 APOBP04114 4563 aaKnown RBP14.42□□□□□ -0.1
C9orf3-209ENST00000460573 SPINK8P0C7L1 97 aa14.42□□□□□ -0.1
C9orf3-209ENST00000460573 S100A12P80511 92 aa14.42□□□□□ -0.1
C9orf3-209ENST00000460573 TMEM170BQ5T4T1 132 aa14.42□□□□□ -0.1
C9orf3-209ENST00000460573 LINC01545Q5VT33 79 aa14.42□□□□□ -0.1
C9orf3-209ENST00000460573 CXCL5P42830 114 aa14.41□□□□□ -0.1
C9orf3-209ENST00000460573 CKS1BP61024 79 aa14.41□□□□□ -0.1
C9orf3-209ENST00000460573 Q5VSD8 79 aa14.41□□□□□ -0.1
C9orf3-209ENST00000460573 TRBV30A0A0K0K1B3 111 aa14.4□□□□□ -0.1
C9orf3-209ENST00000460573 UNQ6190/PRO20217Q6UXQ8 127 aa14.4□□□□□ -0.1
C9orf3-209ENST00000460573 COX7B2Q8TF08 81 aa14.4□□□□□ -0.1
C9orf3-209ENST00000460573 IGLV5-39A0A0G2JS06 123 aa14.39□□□□□ -0.11
C9orf3-209ENST00000460573 FAM229AH3BQW9 127 aa14.39□□□□□ -0.11
C9orf3-209ENST00000460573 SMR3BP02814 79 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-209ENST00000460573 INAFM2P0DMQ5 153 aa14.39□□□□□ -0.11
C9orf3-209ENST00000460573 PLNP26678 52 aa14.39□□□□□ -0.11
C9orf3-209ENST00000460573 LOC107984640A0A0U1RRK4 108 aa14.38□□□□□ -0.11
C9orf3-209ENST00000460573 HAMPP81172 84 aa14.38□□□□□ -0.11
C9orf3-209ENST00000460573 C2orf82Q6UX34 121 aa14.38□□□□□ -0.11
C9orf3-209ENST00000460573 CIRBPQ14011 172 aaKnown RBP14.37□□□□□ -0.11
C9orf3-209ENST00000460573 C10orf25Q5T742 122 aa14.37□□□□□ -0.11
C9orf3-209ENST00000460573 LINC00474Q9P2X8 69 aa14.37□□□□□ -0.11
C9orf3-209ENST00000460573 C6orf48Q9UBA6 75 aa14.36□□□□□ -0.11
C9orf3-209ENST00000460573 TMEM223A0PJW6 202 aa14.35□□□□□ -0.11
C9orf3-209ENST00000460573 DPM2O94777 84 aa14.35□□□□□ -0.11
C9orf3-209ENST00000460573 TLX1NBP0CAT3 122 aa14.34□□□□□ -0.11
C9orf3-209ENST00000460573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-209ENST00000460573 IGKCP01834 107 aa14.33□□□□□ -0.12
C9orf3-209ENST00000460573 A0A096LNI7 61 aa14.32□□□□□ -0.12
C9orf3-209ENST00000460573 SCXQ7RTU7 201 aa14.32□□□□□ -0.12
C9orf3-209ENST00000460573 SPACA4Q8TDM5 124 aa14.32□□□□□ -0.12
C9orf3-209ENST00000460573 DPH3Q96FX2 82 aa14.32□□□□□ -0.12
C9orf3-209ENST00000460573 VAMP8Q9BV40 100 aa14.32□□□□□ -0.12
C9orf3-209ENST00000460573 IGKV2-24A0A0C4DH68 120 aa14.31□□□□□ -0.12
C9orf3-209ENST00000460573 PTTG1IPP53801 180 aa14.31□□□□□ -0.12
C9orf3-209ENST00000460573 SFTA2Q6UW10 78 aa14.31□□□□□ -0.12
C9orf3-209ENST00000460573 CIRBP-AS1Q8TBR5 109 aa14.31□□□□□ -0.12
C9orf3-209ENST00000460573 HSBP1L1C9JCN9 74 aa14.3□□□□□ -0.12
C9orf3-209ENST00000460573 PANO1I0J062 215 aa14.3□□□□□ -0.12
C9orf3-209ENST00000460573 CHTF8P0CG12 524 aa14.3□□□□□ -0.12
C9orf3-209ENST00000460573 RPL18AQ02543 176 aaKnown RBP14.3□□□□□ -0.12
C9orf3-209ENST00000460573 GAGE2BQ13066 116 aa14.3□□□□□ -0.12
C9orf3-209ENST00000460573 MAJINQ3KP22 176 aa14.29□□□□□ -0.12
C9orf3-209ENST00000460573 PMCHL2Q9BQD1 86 aa14.29□□□□□ -0.12
C9orf3-209ENST00000460573 DNAH8Q96JB1 4490 aa14.29□□□□□ -0.12
C9orf3-209ENST00000460573 NDUFC2-KCTD14E9PQ53 114 aa14.28□□□□□ -0.12
C9orf3-209ENST00000460573 HERVK_113P61574 105 aa14.27□□□□□ -0.13
C9orf3-209ENST00000460573 A0A087WYN8 130 aa14.26□□□□□ -0.13
C9orf3-209ENST00000460573 C9orf116Q5BN46 136 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-209ENST00000460573 Q6ZRP5 223 aa14.26□□□□□ -0.13
C9orf3-209ENST00000460573 PLAC8Q9NZF1 115 aa14.25□□□□□ -0.13
C9orf3-209ENST00000460573 ATOH7Q8N100 152 aa14.24□□□□□ -0.13
C9orf3-209ENST00000460573 STPG4Q8N801 248 aa14.24□□□□□ -0.13
C9orf3-209ENST00000460573 TSTD3H0UI37 97 aa14.23□□□□□ -0.13
C9orf3-209ENST00000460573 LEPROTO15243 131 aa14.23□□□□□ -0.13
C9orf3-209ENST00000460573 PLEKHB2Q96CS7 222 aa14.23□□□□□ -0.13
C9orf3-209ENST00000460573 PLA2G1BP04054 148 aaKnown RBP14.22□□□□□ -0.13
C9orf3-209ENST00000460573 GAGE2EQ4V326 116 aa14.22□□□□□ -0.13
C9orf3-209ENST00000460573 SPATA45Q537H7 98 aa14.22□□□□□ -0.13
C9orf3-209ENST00000460573 ZNF625Q96I27 306 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-209ENST00000460573 GAGE2DQ9UEU5 116 aa14.22□□□□□ -0.13
C9orf3-209ENST00000460573 PAM16Q9Y3D7 125 aa14.22□□□□□ -0.13
C9orf3-209ENST00000460573 COX17Q14061 63 aa14.2□□□□□ -0.14
C9orf3-209ENST00000460573 HERV-K104P63124 156 aa14.18□□□□□ -0.14
C9orf3-209ENST00000460573 LINC00528Q8N1L1 170 aa14.18□□□□□ -0.14
C9orf3-209ENST00000460573 MYMXA0A1B0GTQ4 84 aa14.17□□□□□ -0.14
C9orf3-209ENST00000460573 E9PLD3 99 aa14.17□□□□□ -0.14
C9orf3-209ENST00000460573 J3QQQ9 107 aa14.17□□□□□ -0.14
C9orf3-209ENST00000460573 NDUFA12Q9UI09 145 aa14.17□□□□□ -0.14
C9orf3-209ENST00000460573 ERG28Q9UKR5 140 aa14.17□□□□□ -0.14
C9orf3-209ENST00000460573 NMUP48645 174 aa14.16□□□□□ -0.14
C9orf3-209ENST00000460573 LINC00587B1AMM8 73 aa14.15□□□□□ -0.14
C9orf3-209ENST00000460573 LGALS3P17931 250 aaKnown RBP14.15□□□□□ -0.14
C9orf3-209ENST00000460573 A0A1W2PNN7 141 aa14.14□□□□□ -0.15
C9orf3-209ENST00000460573 PFN2P35080 140 aa14.14□□□□□ -0.15
C9orf3-209ENST00000460573 C9orf129Q5T035 196 aaKnown RBP14.14□□□□□ -0.15
C9orf3-209ENST00000460573 TSPEAR-AS2P59090 65 aa14.13□□□□□ -0.15
C9orf3-209ENST00000460573 J3QL48 77 aa14.12□□□□□ -0.15
C9orf3-209ENST00000460573 C7orf33Q8WU49 177 aa14.12□□□□□ -0.15
C9orf3-209ENST00000460573 MIEN1Q9BRT3 115 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 475.5 ms