RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 NDUFA1O15239 70 aa6.98□□□□□ -1.29
FN1-214ENST00000460217 SLPIP03973 132 aa6.98□□□□□ -1.29
FN1-214ENST00000460217 SMIM6P0DI80 62 aa6.98□□□□□ -1.29
FN1-214ENST00000460217 TSPEAR-AS2P59090 65 aa6.98□□□□□ -1.29
FN1-214ENST00000460217 CKS1BP61024 79 aa6.98□□□□□ -1.29
FN1-214ENST00000460217 MAJINQ3KP22 176 aa6.98□□□□□ -1.29
FN1-214ENST00000460217 ANKRD39Q53RE8 183 aa6.98□□□□□ -1.29
FN1-214ENST00000460217 ZNF625Q96I27 306 aaPredicted RBP6.98□□□□□ -1.29
FN1-214ENST00000460217 CAMK2N2Q96S95 79 aa6.98□□□□□ -1.29
FN1-214ENST00000460217 LGALS3P17931 250 aaKnown RBP6.97□□□□□ -1.29
FN1-214ENST00000460217 NMUP48645 174 aa6.97□□□□□ -1.29
FN1-214ENST00000460217 SYCNQ0VAF6 134 aa6.97□□□□□ -1.29
FN1-214ENST00000460217 FRAS1Q86XX4 4008 aa6.97□□□□□ -1.29
FN1-214ENST00000460217 FAT2Q9NYQ8 4349 aa6.96□□□□□ -1.3
FN1-214ENST00000460217 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.96□□□□□ -1.3
FN1-214ENST00000460217 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
FN1-214ENST00000460217 TRBV30A0A0K0K1B3 111 aa6.96□□□□□ -1.3
FN1-214ENST00000460217 RNF151Q2KHN1 245 aa6.96□□□□□ -1.3
FN1-214ENST00000460217 CDPF1Q6NVV7 123 aa6.96□□□□□ -1.3
FN1-214ENST00000460217 C2orf82Q6UX34 121 aa6.96□□□□□ -1.3
FN1-214ENST00000460217 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.3
FN1-214ENST00000460217 CARD19Q96LW7 228 aa6.96□□□□□ -1.3
FN1-214ENST00000460217 VAMP8Q9BV40 100 aa6.96□□□□□ -1.3
FN1-214ENST00000460217 NDUFA12Q9UI09 145 aa6.96□□□□□ -1.3
FN1-214ENST00000460217 MYMXA0A1B0GTQ4 84 aa6.95□□□□□ -1.3
FN1-214ENST00000460217 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
FN1-214ENST00000460217 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
FN1-214ENST00000460217 HERV-K104P63124 156 aa6.95□□□□□ -1.3
FN1-214ENST00000460217 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
FN1-214ENST00000460217 Q6ZRU5 148 aa6.95□□□□□ -1.3
FN1-214ENST00000460217 C9orf163Q8N9P6 203 aa6.94□□□□□ -1.3
FN1-214ENST00000460217 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
FN1-214ENST00000460217 PAM16Q9Y3D7 125 aa6.94□□□□□ -1.3
FN1-214ENST00000460217 KRTAP10-2P60368 255 aa6.93□□□□□ -1.3
FN1-214ENST00000460217 S100A12P80511 92 aa6.93□□□□□ -1.3
FN1-214ENST00000460217 SPATA45Q537H7 98 aa6.93□□□□□ -1.3
FN1-214ENST00000460217 PCP2Q8IVA1 136 aa6.93□□□□□ -1.3
FN1-214ENST00000460217 RYR3Q15413 4870 aa6.93□□□□□ -1.3
FN1-214ENST00000460217 IGLV5-52A0A0A0MRZ9 124 aa6.92□□□□□ -1.3
FN1-214ENST00000460217 ZNF815PA8K554 130 aa6.92□□□□□ -1.3
FN1-214ENST00000460217 LINC00587B1AMM8 73 aa6.92□□□□□ -1.3
FN1-214ENST00000460217 GHRHP01286 108 aa6.92□□□□□ -1.3
FN1-214ENST00000460217 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
FN1-214ENST00000460217 COX8AP10176 69 aa6.92□□□□□ -1.3
FN1-214ENST00000460217 COX17Q14061 63 aa6.92□□□□□ -1.3
FN1-214ENST00000460217 TTTY13Q9BZ97 58 aa6.92□□□□□ -1.3
FN1-214ENST00000460217 PKIGQ9Y2B9 76 aa6.92□□□□□ -1.3
FN1-214ENST00000460217 DLEU1O43261 78 aa6.91□□□□□ -1.3
FN1-214ENST00000460217 BOD1L2Q8IYS8 172 aa6.91□□□□□ -1.3
FN1-214ENST00000460217 ERG28Q9UKR5 140 aa6.91□□□□□ -1.3
FN1-214ENST00000460217 A0A0J9YXY3 114 aa6.9□□□□□ -1.3
FN1-214ENST00000460217 NDUFC2-KCTD14E9PQ53 114 aa6.9□□□□□ -1.3
FN1-214ENST00000460217 C9orf116Q5BN46 136 aaPredicted RBP6.9□□□□□ -1.3
FN1-214ENST00000460217 SDIM1Q6ZPB5 146 aa6.9□□□□□ -1.3
FN1-214ENST00000460217 LOC107984640A0A0U1RRK4 108 aa6.89□□□□□ -1.31
FN1-214ENST00000460217 TIMM17BO60830 172 aa6.89□□□□□ -1.31
FN1-214ENST00000460217 C16orf90A8MZG2 172 aa6.88□□□□□ -1.31
FN1-214ENST00000460217 GCSHP23434 173 aa6.88□□□□□ -1.31
FN1-214ENST00000460217 FUSP35637 526 aaKnown RBP eCLIP6.88□□□□□ -1.31
FN1-214ENST00000460217 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
FN1-214ENST00000460217 MEIG1Q5JSS6 88 aa6.88□□□□□ -1.31
FN1-214ENST00000460217 SCGB1D4Q6XE38 83 aa6.88□□□□□ -1.31
FN1-214ENST00000460217 C14orf144Q96I85 54 aa6.88□□□□□ -1.31
FN1-214ENST00000460217 C12orf57Q99622 126 aa6.88□□□□□ -1.31
FN1-214ENST00000460217 SMIM13P0DJ93 91 aa6.87□□□□□ -1.31
FN1-214ENST00000460217 LINC01620Q4KN68 170 aa6.87□□□□□ -1.31
FN1-214ENST00000460217 SLC25A34Q6PIV7 304 aa6.87□□□□□ -1.31
FN1-214ENST00000460217 Q6ZRP5 223 aa6.87□□□□□ -1.31
FN1-214ENST00000460217 LINC00518Q8N0U6 118 aa6.87□□□□□ -1.31
FN1-214ENST00000460217 LITAFQ99732 161 aa6.87□□□□□ -1.31
FN1-214ENST00000460217 DNAH11Q96DT5 4516 aa6.87□□□□□ -1.31
FN1-214ENST00000460217 PKD1P98161 4303 aa6.87□□□□□ -1.31
FN1-214ENST00000460217 PFN2P35080 140 aa6.86□□□□□ -1.31
FN1-214ENST00000460217 PTTG1IPP53801 180 aa6.86□□□□□ -1.31
FN1-214ENST00000460217 LINC00158P58513 81 aa6.86□□□□□ -1.31
FN1-214ENST00000460217 LINC00474Q9P2X8 69 aa6.86□□□□□ -1.31
FN1-214ENST00000460217 A0A096LNI7 61 aa6.85□□□□□ -1.31
FN1-214ENST00000460217 TMEM238C9JI98 176 aa6.85□□□□□ -1.31
FN1-214ENST00000460217 RPL18AQ02543 176 aaKnown RBP6.85□□□□□ -1.31
FN1-214ENST00000460217 LCE2AQ5TA79 106 aaPredicted RBP6.85□□□□□ -1.31
FN1-214ENST00000460217 MIR7-3HGQ8N6C7 128 aa6.85□□□□□ -1.31
FN1-214ENST00000460217 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
FN1-214ENST00000460217 HIGD1BQ9P298 99 aa6.85□□□□□ -1.31
FN1-214ENST00000460217 UQCR10Q9UDW1 63 aa6.85□□□□□ -1.31
FN1-214ENST00000460217 LOC107984156A0A0G2JMH3 177 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 KRTAP10-1P60331 282 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 GAGE2BQ13066 116 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 ADAMTSL4-AS1Q5T5F5 129 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 Q6ZSA8 131 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 Q6ZVH6 145 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 ARL17AQ8IVW1 177 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 SPANXDQ9BXN6 97 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 SPANXB1Q9NS25 103 aaPredicted RBP6.84□□□□□ -1.31
FN1-214ENST00000460217 SPANXCQ9NY87 97 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 TP73-AS1Q9UF72 201 aa6.84□□□□□ -1.31
FN1-214ENST00000460217 HECTD4Q9Y4D8 3996 aa6.83□□□□□ -1.32
FN1-214ENST00000460217 A0A0U1RRA0 63 aa6.83□□□□□ -1.32
FN1-214ENST00000460217 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms