RNA–Protein interactions for RNA: ENST00000459988.1

UBAP2-208, Transcript of ubiquitin associated protein 2, human

TSL 2

Gene UBAP2, Length 2,628 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBAP2-208	ENST00000459988	VPS13D	Q5THJ4	4388 aa		4.63	□□□□□ -1.67
UBAP2-208	ENST00000459988	IGLV9-49	A0A0B4J1Y8	123 aa		4.63	□□□□□ -1.67
UBAP2-208	ENST00000459988	MYMX	A0A1B0GTQ4	84 aa		4.63	□□□□□ -1.67
UBAP2-208	ENST00000459988	LYRM7	Q5U5X0	104 aa		4.63	□□□□□ -1.67
UBAP2-208	ENST00000459988	PRADC1	Q9BSG0	188 aa		4.63	□□□□□ -1.67
UBAP2-208	ENST00000459988	CHCHD7	Q9BUK0	85 aa		4.63	□□□□□ -1.67
UBAP2-208	ENST00000459988	TRBV10-1	A0A0K0K1A3	114 aa		4.62	□□□□□ -1.67
UBAP2-208	ENST00000459988	HERVK_113	P61574	105 aa		4.62	□□□□□ -1.67
UBAP2-208	ENST00000459988		Q6ZTI0	123 aa		4.62	□□□□□ -1.67
UBAP2-208	ENST00000459988	FAM104A	Q969W3	186 aa		4.62	□□□□□ -1.67
UBAP2-208	ENST00000459988	AMELX	Q99217	191 aa		4.62	□□□□□ -1.67
UBAP2-208	ENST00000459988	SPANXA1	Q9NS26	97 aa		4.62	□□□□□ -1.67
UBAP2-208	ENST00000459988		H3BRM9	83 aa		4.62	□□□□□ -1.67
UBAP2-208	ENST00000459988	OPRPN	Q99935	248 aa	Predicted RBP	4.62	□□□□□ -1.67
UBAP2-208	ENST00000459988	TRBV7-3	A0A075B6L6	115 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988		A0A1B0GWB2	263 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	RRN3P1	Q2M238	152 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	CEND1	Q8N111	149 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	NOP10	Q9NPE3	64 aa	Known RBP	4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	UBE2D4	Q9Y2X8	147 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	SMIM26	A0A096LP01	95 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	C16orf90	A8MZG2	172 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	LCE2B	O14633	110 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	ANKRD29	Q8N6D5	301 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	TIMM21	Q9BVV7	248 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	CRCT1	Q9UGL9	99 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988	CSMD3	Q7Z407	3707 aa		4.61	□□□□□ -1.67
UBAP2-208	ENST00000459988		A0A1B0GX51	115 aa		4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	TMEM223	A0PJW6	202 aa		4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	FXYD2	P54710	66 aa		4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	MRPS36	P82909	103 aa	Known RBP	4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	RPL36A	P83881	106 aa	Known RBP	4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	TMEM170B	Q5T4T1	132 aa		4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	FAM222A	Q5U5X8	452 aa		4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	RPL36AL	Q969Q0	106 aa	Known RBP	4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	ZNF815P	A8K554	130 aa		4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	IGHV4-30-4	P0DP06	118 aa		4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	ZNF22	P17026	224 aa	Predicted RBP	4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	RPS28	P62857	69 aa	Known RBP	4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	RPL24	P83731	157 aa	Known RBP	4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	C6orf223	Q8N319	242 aa		4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	MYCBP2	O75592	4640 aa		4.6	□□□□□ -1.67
UBAP2-208	ENST00000459988	IGHV3-38	A0A0C4DH36	116 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	FAM236A	A0A1B0GUQ0	79 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	FAM236B	A0A1B0GV22	79 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	LEPROT	O15243	131 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	UBE2D3	P61077	147 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	UBE2D2	P62837	147 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	SLC25A29	Q8N8R3	303 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988		A0A0J9YXV3	536 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	TRBV6-4	A0A1B0GX49	114 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	SMIM13	P0DJ93	91 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	TSPEAR-AS2	P59090	65 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	TTC32	Q5I0X7	151 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	HIST1H4G	Q99525	98 aa		4.59	□□□□□ -1.67
UBAP2-208	ENST00000459988	TRGV2	A0A075B6R0	118 aa		4.59	□□□□□ -1.68
UBAP2-208	ENST00000459988		J3QQQ9	107 aa		4.59	□□□□□ -1.68
UBAP2-208	ENST00000459988	RTL8C	O15255	209 aa		4.59	□□□□□ -1.68
UBAP2-208	ENST00000459988		Q6ZUT4	128 aa		4.59	□□□□□ -1.68
UBAP2-208	ENST00000459988	LINC00612	Q8N6U2	182 aa		4.59	□□□□□ -1.68
UBAP2-208	ENST00000459988	SCGB1D4	Q6XE38	83 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988		Q6ZRU5	148 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	GTF2H5	Q6ZYL4	71 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	OR5A1	Q8NGJ0	315 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	PLEKHB2	Q96CS7	222 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988		A0A0J9YY99	117 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	LGALS3	P17931	250 aa	Known RBP	4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	C12orf74	Q32Q52	190 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	MEIG1	Q5JSS6	88 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	AMMECR1L	Q6DCA0	310 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	NTM-AS1	Q6ZSK4	140 aa		4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	C11orf68	Q9H3H3	251 aa	Known RBP	4.58	□□□□□ -1.68
UBAP2-208	ENST00000459988	UBE2D1	P51668	147 aa		4.57	□□□□□ -1.68
UBAP2-208	ENST00000459988	LINC00337	Q8N6G1	96 aa		4.57	□□□□□ -1.68
UBAP2-208	ENST00000459988	NHP2	Q9NX24	153 aa	Known RBP	4.57	□□□□□ -1.68
UBAP2-208	ENST00000459988	PKHD1L1	Q86WI1	4243 aa		4.57	□□□□□ -1.68
UBAP2-208	ENST00000459988	IGLV5-45	A0A087WSX0	123 aa		4.57	□□□□□ -1.68
UBAP2-208	ENST00000459988	TRGV4	A0A0C4DH28	118 aa		4.57	□□□□□ -1.68
UBAP2-208	ENST00000459988		H3BUT2	72 aa		4.57	□□□□□ -1.68
UBAP2-208	ENST00000459988	FHL2	Q14192	279 aa		4.57	□□□□□ -1.68
UBAP2-208	ENST00000459988		A0A1W2PPM0	123 aa		4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988		H7C423	109 aa		4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988	NDUFS5	O43920	106 aa		4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988	PFN2	P35080	140 aa		4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988	RNASE13	Q5GAN3	156 aa	Known RBP	4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988	RAB37	Q96AX2	223 aa		4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988	IGHV1-58	A0A0C4DH39	117 aa		4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988		K7ERJ3	54 aa		4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988	IGHV3-30-3	P0DP02	117 aa		4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988	TMEM243	Q9BU79	118 aa		4.56	□□□□□ -1.68
UBAP2-208	ENST00000459988	FAT4	Q6V0I7	4981 aa		4.55	□□□□□ -1.68
UBAP2-208	ENST00000459988	TEX48	A0A1B0GUV7	120 aa		4.55	□□□□□ -1.68
UBAP2-208	ENST00000459988		K7EP34	96 aa		4.55	□□□□□ -1.68
UBAP2-208	ENST00000459988	NDUFC2	O95298	119 aa		4.55	□□□□□ -1.68
UBAP2-208	ENST00000459988	VSIG2	Q96IQ7	327 aa		4.55	□□□□□ -1.68
UBAP2-208	ENST00000459988	IGHV3-30	P01768	117 aa		4.55	□□□□□ -1.68
UBAP2-208	ENST00000459988	IGHV3-30-5	P0DP03	117 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms