RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ADAMTSL4-AS1Q5T5F5 129 aa5.78□□□□□ -1.48
RIF1-208ENST00000457745 C10orf25Q5T742 122 aa5.78□□□□□ -1.48
RIF1-208ENST00000457745 UBE2DNLQ8IWF7 75 aa5.78□□□□□ -1.48
RIF1-208ENST00000457745 WWC2-AS2Q96NR7 200 aa5.78□□□□□ -1.48
RIF1-208ENST00000457745 SNHG12Q9BXW3 62 aa5.78□□□□□ -1.48
RIF1-208ENST00000457745 LYSTQ99698 3801 aa5.78□□□□□ -1.48
RIF1-208ENST00000457745 CRPP02741 224 aa5.77□□□□□ -1.49
RIF1-208ENST00000457745 LGALS3P17931 250 aaKnown RBP5.77□□□□□ -1.49
RIF1-208ENST00000457745 HIGD2BQ4VC39 106 aa5.77□□□□□ -1.49
RIF1-208ENST00000457745 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
RIF1-208ENST00000457745 COX7B2Q8TF08 81 aa5.77□□□□□ -1.49
RIF1-208ENST00000457745 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
RIF1-208ENST00000457745 TOMM7Q9P0U1 55 aa5.77□□□□□ -1.49
RIF1-208ENST00000457745 NDUFA12Q9UI09 145 aa5.77□□□□□ -1.49
RIF1-208ENST00000457745 DNAH10Q8IVF4 4471 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 IGKV2D-24A0A075B6R9 120 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 H3BRM9 83 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 M0R2N4 97 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 COX7A2LO14548 114 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 NDUFA1O15239 70 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 SEC11AP67812 179 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 MIAQ16674 131 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 DAND5Q8N907 189 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 ORAOV1Q8WV07 137 aa5.76□□□□□ -1.49
RIF1-208ENST00000457745 A0A0U1RRA0 63 aa5.75□□□□□ -1.49
RIF1-208ENST00000457745 NBDYA0A0U1RRE5 68 aa5.75□□□□□ -1.49
RIF1-208ENST00000457745 LECT2O14960 151 aa5.75□□□□□ -1.49
RIF1-208ENST00000457745 SLPIP03973 132 aa5.75□□□□□ -1.49
RIF1-208ENST00000457745 HINT1P49773 126 aaPredicted RBP5.75□□□□□ -1.49
RIF1-208ENST00000457745 C9orf116Q5BN46 136 aaPredicted RBP5.75□□□□□ -1.49
RIF1-208ENST00000457745 SOSTDC1Q6X4U4 206 aa5.75□□□□□ -1.49
RIF1-208ENST00000457745 Q6ZRN7 208 aaPredicted RBP5.75□□□□□ -1.49
RIF1-208ENST00000457745 TRAV8-4A0A0B4J246 113 aa5.74□□□□□ -1.49
RIF1-208ENST00000457745 FXYD2P54710 66 aa5.74□□□□□ -1.49
RIF1-208ENST00000457745 SPAG11BQ08648 103 aa5.74□□□□□ -1.49
RIF1-208ENST00000457745 BVES-AS1Q5T3Y7 98 aa5.74□□□□□ -1.49
RIF1-208ENST00000457745 UNQ6190/PRO20217Q6UXQ8 127 aa5.74□□□□□ -1.49
RIF1-208ENST00000457745 Q6ZVH6 145 aa5.74□□□□□ -1.49
RIF1-208ENST00000457745 LINC01561Q8N1V8 128 aa5.74□□□□□ -1.49
RIF1-208ENST00000457745 C1orf43Q9BWL3 253 aa5.74□□□□□ -1.49
RIF1-208ENST00000457745 HIGD1BQ9P298 99 aa5.74□□□□□ -1.49
RIF1-208ENST00000457745 Q6ZR54 194 aa5.73□□□□□ -1.49
RIF1-208ENST00000457745 Q8IZM0 81 aa5.73□□□□□ -1.49
RIF1-208ENST00000457745 Q8NDZ9 215 aa5.73□□□□□ -1.49
RIF1-208ENST00000457745 NTN5Q8WTR8 489 aaPredicted RBP5.73□□□□□ -1.49
RIF1-208ENST00000457745 LINC00476Q8WZB0 136 aa5.73□□□□□ -1.49
RIF1-208ENST00000457745 HYDINQ4G0P3 5121 aa5.73□□□□□ -1.49
RIF1-208ENST00000457745 DNAH6Q9C0G6 4158 aa5.73□□□□□ -1.49
RIF1-208ENST00000457745 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
RIF1-208ENST00000457745 K7ERJ3 54 aa5.72□□□□□ -1.49
RIF1-208ENST00000457745 SMIM13P0DJ93 91 aa5.72□□□□□ -1.49
RIF1-208ENST00000457745 NPC2P61916 151 aa5.72□□□□□ -1.49
RIF1-208ENST00000457745 BATFQ16520 125 aa5.72□□□□□ -1.49
RIF1-208ENST00000457745 C6orf48Q9UBA6 75 aa5.72□□□□□ -1.49
RIF1-208ENST00000457745 MALP21145 153 aa5.71□□□□□ -1.5
RIF1-208ENST00000457745 FUSP35637 526 aaKnown RBP eCLIP5.71□□□□□ -1.5
RIF1-208ENST00000457745 HSD52Q0P140 79 aa5.71□□□□□ -1.5
RIF1-208ENST00000457745 SCGB1D4Q6XE38 83 aa5.71□□□□□ -1.5
RIF1-208ENST00000457745 Q6ZRU5 148 aa5.71□□□□□ -1.5
RIF1-208ENST00000457745 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
RIF1-208ENST00000457745 GVQW2A0A096LPI5 108 aaPredicted RBP5.7□□□□□ -1.5
RIF1-208ENST00000457745 LRCOL1A6NCL2 159 aa5.7□□□□□ -1.5
RIF1-208ENST00000457745 LY6G6CO95867 125 aa5.7□□□□□ -1.5
RIF1-208ENST00000457745 GCSHP23434 173 aa5.7□□□□□ -1.5
RIF1-208ENST00000457745 MUSTN1Q8IVN3 82 aa5.7□□□□□ -1.5
RIF1-208ENST00000457745 SPANXB1Q9NS25 103 aaPredicted RBP5.7□□□□□ -1.5
RIF1-208ENST00000457745 PFN2P35080 140 aa5.69□□□□□ -1.5
RIF1-208ENST00000457745 C6orf226Q5I0X4 101 aa5.69□□□□□ -1.5
RIF1-208ENST00000457745 CEND1Q8N111 149 aa5.69□□□□□ -1.5
RIF1-208ENST00000457745 DNAH17Q9UFH2 4485 aa5.69□□□□□ -1.5
RIF1-208ENST00000457745 DNAH2Q9P225 4427 aa5.68□□□□□ -1.5
RIF1-208ENST00000457745 M0R143 59 aa5.68□□□□□ -1.5
RIF1-208ENST00000457745 MEIG1Q5JSS6 88 aa5.68□□□□□ -1.5
RIF1-208ENST00000457745 MIR7-3HGQ8N6C7 128 aa5.68□□□□□ -1.5
RIF1-208ENST00000457745 HIST1H4GQ99525 98 aa5.68□□□□□ -1.5
RIF1-208ENST00000457745 NAA38Q9BRA0 125 aaKnown RBP5.68□□□□□ -1.5
RIF1-208ENST00000457745 TM2D2Q9BX73 214 aa5.68□□□□□ -1.5
RIF1-208ENST00000457745 SPANXDQ9BXN6 97 aa5.68□□□□□ -1.5
RIF1-208ENST00000457745 SPANXCQ9NY87 97 aa5.68□□□□□ -1.5
RIF1-208ENST00000457745 ERG28Q9UKR5 140 aa5.68□□□□□ -1.5
RIF1-208ENST00000457745 KMT2AQ03164 3969 aa5.67□□□□□ -1.5
RIF1-208ENST00000457745 SACSQ9NZJ4 4579 aa5.67□□□□□ -1.5
RIF1-208ENST00000457745 C3orf84H3BNL1 204 aa5.67□□□□□ -1.5
RIF1-208ENST00000457745 TIMM17BO60830 172 aa5.67□□□□□ -1.5
RIF1-208ENST00000457745 PRSS2P07478 247 aa5.67□□□□□ -1.5
RIF1-208ENST00000457745 CFAP161Q6P656 301 aa5.67□□□□□ -1.5
RIF1-208ENST00000457745 LINC00308Q8TCZ7 52 aa5.67□□□□□ -1.5
RIF1-208ENST00000457745 A4D1N5 150 aa5.66□□□□□ -1.5
RIF1-208ENST00000457745 TAX1BP3O14907 124 aa5.66□□□□□ -1.5
RIF1-208ENST00000457745 APOMO95445 188 aa5.66□□□□□ -1.5
RIF1-208ENST00000457745 CKS1BP61024 79 aa5.66□□□□□ -1.5
RIF1-208ENST00000457745 HERV-K104P63124 156 aa5.66□□□□□ -1.5
RIF1-208ENST00000457745 TAL2Q16559 108 aa5.66□□□□□ -1.5
RIF1-208ENST00000457745 LINC01620Q4KN68 170 aa5.66□□□□□ -1.5
RIF1-208ENST00000457745 CAMK2N2Q96S95 79 aa5.66□□□□□ -1.5
RIF1-208ENST00000457745 RTL8CO15255 209 aa5.65□□□□□ -1.5
RIF1-208ENST00000457745 CFC1BP0CG36 223 aa5.65□□□□□ -1.5
RIF1-208ENST00000457745 CFC1P0CG37 223 aa5.65□□□□□ -1.5
RIF1-208ENST00000457745 LINC00158P58513 81 aa5.65□□□□□ -1.5
RIF1-208ENST00000457745 PRR3P79522 188 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms