RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 COX7B2Q8TF08 81 aa11.52□□□□□ -0.57
FAM239A-203ENST00000456563 IGKCP01834 107 aa11.51□□□□□ -0.57
FAM239A-203ENST00000456563 RNF151Q2KHN1 245 aa11.51□□□□□ -0.57
FAM239A-203ENST00000456563 UNQ6190/PRO20217Q6UXQ8 127 aa11.51□□□□□ -0.57
FAM239A-203ENST00000456563 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
FAM239A-203ENST00000456563 CXCL5P42830 114 aa11.5□□□□□ -0.57
FAM239A-203ENST00000456563 C10orf25Q5T742 122 aa11.5□□□□□ -0.57
FAM239A-203ENST00000456563 C2orf82Q6UX34 121 aa11.5□□□□□ -0.57
FAM239A-203ENST00000456563 CKS1BP61024 79 aa11.49□□□□□ -0.57
FAM239A-203ENST00000456563 BIRC6Q9NR09 4857 aa11.48□□□□□ -0.57
FAM239A-203ENST00000456563 TRBV30A0A0K0K1B3 111 aa11.48□□□□□ -0.57
FAM239A-203ENST00000456563 PKIGQ9Y2B9 76 aa11.48□□□□□ -0.57
FAM239A-203ENST00000456563 Q6ZSA8 131 aa11.47□□□□□ -0.57
FAM239A-203ENST00000456563 C6orf48Q9UBA6 75 aa11.47□□□□□ -0.57
FAM239A-203ENST00000456563 C20orf202A1L168 122 aa11.46□□□□□ -0.57
FAM239A-203ENST00000456563 FAM30AQ9NZY2 134 aa11.46□□□□□ -0.57
FAM239A-203ENST00000456563 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
FAM239A-203ENST00000456563 LOC107984640A0A0U1RRK4 108 aa11.44□□□□□ -0.58
FAM239A-203ENST00000456563 HERVK_113P61574 105 aa11.44□□□□□ -0.58
FAM239A-203ENST00000456563 TLX1NBP0CAT3 122 aa11.43□□□□□ -0.58
FAM239A-203ENST00000456563 AKR1D1P51857 326 aa11.43□□□□□ -0.58
FAM239A-203ENST00000456563 SFTA2Q6UW10 78 aa11.43□□□□□ -0.58
FAM239A-203ENST00000456563 TMA7Q9Y2S6 64 aaKnown RBP11.43□□□□□ -0.58
FAM239A-203ENST00000456563 CDK2AP2O75956 126 aa11.42□□□□□ -0.58
FAM239A-203ENST00000456563 CIRBPQ14011 172 aaKnown RBP11.42□□□□□ -0.58
FAM239A-203ENST00000456563 LEPROTO15243 131 aa11.41□□□□□ -0.58
FAM239A-203ENST00000456563 C9orf116Q5BN46 136 aaPredicted RBP11.41□□□□□ -0.58
FAM239A-203ENST00000456563 PLEKHB2Q96CS7 222 aa11.41□□□□□ -0.58
FAM239A-203ENST00000456563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.41□□□□□ -0.58
FAM239A-203ENST00000456563 A0A096LNI7 61 aa11.4□□□□□ -0.58
FAM239A-203ENST00000456563 PANO1I0J062 215 aa11.4□□□□□ -0.58
FAM239A-203ENST00000456563 XGP55808 180 aa11.4□□□□□ -0.58
FAM239A-203ENST00000456563 ZNF625Q96I27 306 aaPredicted RBP11.4□□□□□ -0.58
FAM239A-203ENST00000456563 APOBP04114 4563 aaKnown RBP11.4□□□□□ -0.58
FAM239A-203ENST00000456563 E9PLD3 99 aa11.39□□□□□ -0.59
FAM239A-203ENST00000456563 NDUFC2-KCTD14E9PQ53 114 aa11.39□□□□□ -0.59
FAM239A-203ENST00000456563 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
FAM239A-203ENST00000456563 PTTG1IPP53801 180 aa11.39□□□□□ -0.59
FAM239A-203ENST00000456563 GAGE2BQ13066 116 aa11.39□□□□□ -0.59
FAM239A-203ENST00000456563 SPACA4Q8TDM5 124 aa11.39□□□□□ -0.59
FAM239A-203ENST00000456563 LINC00474Q9P2X8 69 aa11.39□□□□□ -0.59
FAM239A-203ENST00000456563 IGKV2-24A0A0C4DH68 120 aa11.38□□□□□ -0.59
FAM239A-203ENST00000456563 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
FAM239A-203ENST00000456563 Q6ZRP5 223 aa11.38□□□□□ -0.59
FAM239A-203ENST00000456563 STPG4Q8N801 248 aa11.38□□□□□ -0.59
FAM239A-203ENST00000456563 J3QQQ9 107 aa11.37□□□□□ -0.59
FAM239A-203ENST00000456563 TSPEAR-AS2P59090 65 aa11.37□□□□□ -0.59
FAM239A-203ENST00000456563 MAJINQ3KP22 176 aa11.36□□□□□ -0.59
FAM239A-203ENST00000456563 ATOH7Q8N100 152 aa11.36□□□□□ -0.59
FAM239A-203ENST00000456563 NDUFA12Q9UI09 145 aa11.36□□□□□ -0.59
FAM239A-203ENST00000456563 MYMXA0A1B0GTQ4 84 aa11.35□□□□□ -0.59
FAM239A-203ENST00000456563 HERV-K104P63124 156 aa11.35□□□□□ -0.59
FAM239A-203ENST00000456563 SCXQ7RTU7 201 aa11.35□□□□□ -0.59
FAM239A-203ENST00000456563 CIRBP-AS1Q8TBR5 109 aa11.35□□□□□ -0.59
FAM239A-203ENST00000456563 LGALS3P17931 250 aaKnown RBP11.34□□□□□ -0.59
FAM239A-203ENST00000456563 NMUP48645 174 aa11.34□□□□□ -0.59
FAM239A-203ENST00000456563 HAMPP81172 84 aa11.34□□□□□ -0.59
FAM239A-203ENST00000456563 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
FAM239A-203ENST00000456563 DPH3Q96FX2 82 aa11.34□□□□□ -0.59
FAM239A-203ENST00000456563 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
FAM239A-203ENST00000456563 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
FAM239A-203ENST00000456563 A0A087WYN8 130 aa11.33□□□□□ -0.6
FAM239A-203ENST00000456563 COX17Q14061 63 aa11.33□□□□□ -0.6
FAM239A-203ENST00000456563 PLAC8Q9NZF1 115 aa11.33□□□□□ -0.6
FAM239A-203ENST00000456563 RYR1P21817 5038 aa11.33□□□□□ -0.6
FAM239A-203ENST00000456563 KIAA1109Q2LD37 5005 aa11.33□□□□□ -0.6
FAM239A-203ENST00000456563 SCGB1D1O95968 90 aa11.32□□□□□ -0.6
FAM239A-203ENST00000456563 IGKV2D-26A0A0A0MRZ7 120 aa11.31□□□□□ -0.6
FAM239A-203ENST00000456563 PFN2P35080 140 aa11.31□□□□□ -0.6
FAM239A-203ENST00000456563 ANKRD39Q53RE8 183 aa11.31□□□□□ -0.6
FAM239A-203ENST00000456563 LINC00587B1AMM8 73 aa11.3□□□□□ -0.6
FAM239A-203ENST00000456563 EPM2AB3EWF7 344 aa11.3□□□□□ -0.6
FAM239A-203ENST00000456563 C9orf129Q5T035 196 aaKnown RBP11.29□□□□□ -0.6
FAM239A-203ENST00000456563 HSPG2P98160 4391 aa11.28□□□□□ -0.6
FAM239A-203ENST00000456563 A0A1W2PNN7 141 aa11.28□□□□□ -0.6
FAM239A-203ENST00000456563 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
FAM239A-203ENST00000456563 MEIG1Q5JSS6 88 aa11.28□□□□□ -0.6
FAM239A-203ENST00000456563 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.61
FAM239A-203ENST00000456563 LINC00158P58513 81 aa11.27□□□□□ -0.61
FAM239A-203ENST00000456563 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
FAM239A-203ENST00000456563 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
FAM239A-203ENST00000456563 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
FAM239A-203ENST00000456563 SND1-IT1Q9HBX3 110 aa11.25□□□□□ -0.61
FAM239A-203ENST00000456563 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
FAM239A-203ENST00000456563 A0A0U1RRA0 63 aa11.24□□□□□ -0.61
FAM239A-203ENST00000456563 FAM168BA1KXE4 195 aa11.24□□□□□ -0.61
FAM239A-203ENST00000456563 TTTY13Q9BZ97 58 aa11.24□□□□□ -0.61
FAM239A-203ENST00000456563 SMR3BP02814 79 aaPredicted RBP11.23□□□□□ -0.61
FAM239A-203ENST00000456563 KRTAP7-1Q8IUC3 87 aa11.23□□□□□ -0.61
FAM239A-203ENST00000456563 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
FAM239A-203ENST00000456563 PLA2G2DQ9UNK4 145 aa11.22□□□□□ -0.61
FAM239A-203ENST00000456563 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.61
FAM239A-203ENST00000456563 PCP2Q8IVA1 136 aa11.21□□□□□ -0.61
FAM239A-203ENST00000456563 Q8N1X5 172 aa11.21□□□□□ -0.61
FAM239A-203ENST00000456563 PYY3Q5JQD4 70 aa11.2□□□□□ -0.62
FAM239A-203ENST00000456563 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
FAM239A-203ENST00000456563 LINC00528Q8N1L1 170 aa11.2□□□□□ -0.62
FAM239A-203ENST00000456563 KRTAP17-1Q9BYP8 105 aa11.2□□□□□ -0.62
FAM239A-203ENST00000456563 HERC2O95714 4834 aa11.2□□□□□ -0.62
FAM239A-203ENST00000456563 TIMM17BO60830 172 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms