RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 MXRA5Q9NR99 2828 aa13.3□□□□□ -0.28
SEMA3B-208ENST00000456210 ODF3L2Q3SX64 289 aa13.3□□□□□ -0.28
SEMA3B-208ENST00000456210 LINC01561Q8N1V8 128 aa13.3□□□□□ -0.28
SEMA3B-208ENST00000456210 LY6G6DO95868 133 aa13.29□□□□□ -0.28
SEMA3B-208ENST00000456210 SMIM9A6NGZ8 99 aa13.28□□□□□ -0.28
SEMA3B-208ENST00000456210 TOMM7Q9P0U1 55 aa13.28□□□□□ -0.28
SEMA3B-208ENST00000456210 IGHV3OR16-9A0A0B4J2B5 98 aa13.27□□□□□ -0.28
SEMA3B-208ENST00000456210 USP17L23D6RBM5 183 aa13.27□□□□□ -0.28
SEMA3B-208ENST00000456210 STHQ8IWL8 128 aa13.27□□□□□ -0.28
SEMA3B-208ENST00000456210 SMR3AQ99954 134 aa13.27□□□□□ -0.28
SEMA3B-208ENST00000456210 NCR3O14931 201 aa13.27□□□□□ -0.29
SEMA3B-208ENST00000456210 SS18Q15532 418 aa13.27□□□□□ -0.29
SEMA3B-208ENST00000456210 A0A087WVE0 104 aa13.26□□□□□ -0.29
SEMA3B-208ENST00000456210 ORMDL1Q9P0S3 153 aa13.26□□□□□ -0.29
SEMA3B-208ENST00000456210 TRBV6-4A0A1B0GX49 114 aa13.25□□□□□ -0.29
SEMA3B-208ENST00000456210 OR13C6PQ8NH95 151 aa13.25□□□□□ -0.29
SEMA3B-208ENST00000456210 LINC00167Q96N53 147 aa13.25□□□□□ -0.29
SEMA3B-208ENST00000456210 A0A087WZ39 114 aa13.25□□□□□ -0.29
SEMA3B-208ENST00000456210 CCKP06307 115 aa13.25□□□□□ -0.29
SEMA3B-208ENST00000456210 DPH3Q96FX2 82 aa13.25□□□□□ -0.29
SEMA3B-208ENST00000456210 TEP1Q99973 2627 aaKnown RBP13.24□□□□□ -0.29
SEMA3B-208ENST00000456210 TRAV25A0A0B4J276 109 aa13.24□□□□□ -0.29
SEMA3B-208ENST00000456210 F8P00451 2351 aa13.24□□□□□ -0.29
SEMA3B-208ENST00000456210 PAX4O43316 350 aa13.22□□□□□ -0.29
SEMA3B-208ENST00000456210 S100A7L2Q5SY68 101 aa13.22□□□□□ -0.29
SEMA3B-208ENST00000456210 ATP5EP2Q5VTU8 51 aa13.22□□□□□ -0.29
SEMA3B-208ENST00000456210 MTORP42345 2549 aa13.22□□□□□ -0.29
SEMA3B-208ENST00000456210 IGLV4-60A0A075B6I1 120 aa13.21□□□□□ -0.29
SEMA3B-208ENST00000456210 SLPIP03973 132 aa13.21□□□□□ -0.29
SEMA3B-208ENST00000456210 NOP10Q9NPE3 64 aaKnown RBP13.21□□□□□ -0.29
SEMA3B-208ENST00000456210 PFN2P35080 140 aa13.2□□□□□ -0.3
SEMA3B-208ENST00000456210 LOC100131303A0A0U1RQF7 123 aa13.2□□□□□ -0.3
SEMA3B-208ENST00000456210 JMJD7-PLA2G4BH0Y9G9 81 aa13.2□□□□□ -0.3
SEMA3B-208ENST00000456210 PLAC8L1A1L4L8 177 aa13.19□□□□□ -0.3
SEMA3B-208ENST00000456210 KIR2DL5BQ8NHK3 375 aa13.19□□□□□ -0.3
SEMA3B-208ENST00000456210 KRTAP1-1Q07627 177 aa13.19□□□□□ -0.3
SEMA3B-208ENST00000456210 NIPBLQ6KC79 2804 aaeCLIP13.18□□□□□ -0.3
SEMA3B-208ENST00000456210 TRBV6-8A0A0A6YYG3 113 aa13.18□□□□□ -0.3
SEMA3B-208ENST00000456210 IGKV3OR2-268A0A0C4DH90 116 aa13.18□□□□□ -0.3
SEMA3B-208ENST00000456210 KHDC1LQ5JSQ8 128 aa13.18□□□□□ -0.3
SEMA3B-208ENST00000456210 C16orf74Q96GX8 76 aa13.18□□□□□ -0.3
SEMA3B-208ENST00000456210 LYPD5Q6UWN5 251 aa13.17□□□□□ -0.3
SEMA3B-208ENST00000456210 ANK3Q12955 4377 aaKnown RBP13.17□□□□□ -0.3
SEMA3B-208ENST00000456210 TRGV2A0A075B6R0 118 aa13.16□□□□□ -0.3
SEMA3B-208ENST00000456210 TMEM86BQ8N661 226 aa13.15□□□□□ -0.3
SEMA3B-208ENST00000456210 NSD1Q96L73 2696 aaPredicted RBP13.14□□□□□ -0.31
SEMA3B-208ENST00000456210 NDUFC2-KCTD14E9PQ53 114 aa13.14□□□□□ -0.31
SEMA3B-208ENST00000456210 OXTP01178 125 aa13.14□□□□□ -0.31
SEMA3B-208ENST00000456210 HIVEP2P31629 2446 aa13.14□□□□□ -0.31
SEMA3B-208ENST00000456210 GIG44P09565 113 aaPredicted RBP13.14□□□□□ -0.31
SEMA3B-208ENST00000456210 Q8N814 137 aa13.14□□□□□ -0.31
SEMA3B-208ENST00000456210 TRBV10-3A0A0K0K1G6 114 aa13.13□□□□□ -0.31
SEMA3B-208ENST00000456210 LINC00959A0A1B0GUT2 108 aa13.13□□□□□ -0.31
SEMA3B-208ENST00000456210 TMEM256-PLSCR3K7ERE1 68 aa13.13□□□□□ -0.31
SEMA3B-208ENST00000456210 NANOS2P60321 138 aaKnown RBP13.13□□□□□ -0.31
SEMA3B-208ENST00000456210 DSCR8Q96T75 97 aa13.13□□□□□ -0.31
SEMA3B-208ENST00000456210 NF1P21359 2839 aa13.13□□□□□ -0.31
SEMA3B-208ENST00000456210 C6orf226Q5I0X4 101 aa13.12□□□□□ -0.31
SEMA3B-208ENST00000456210 C11orf44Q8N8P7 122 aa13.12□□□□□ -0.31
SEMA3B-208ENST00000456210 TRGV4A0A0C4DH28 118 aa13.12□□□□□ -0.31
SEMA3B-208ENST00000456210 A0A1W2PRX2 142 aa13.12□□□□□ -0.31
SEMA3B-208ENST00000456210 WIPF1O43516 503 aa13.12□□□□□ -0.31
SEMA3B-208ENST00000456210 Q8IZM0 81 aa13.12□□□□□ -0.31
SEMA3B-208ENST00000456210 NDUFC2O95298 119 aa13.11□□□□□ -0.31
SEMA3B-208ENST00000456210 HILS1P60008 231 aa13.11□□□□□ -0.31
SEMA3B-208ENST00000456210 FHL2Q14192 279 aa13.11□□□□□ -0.31
SEMA3B-208ENST00000456210 GHRHP01286 108 aa13.11□□□□□ -0.31
SEMA3B-208ENST00000456210 FN1P02751 2386 aaKnown RBP13.09□□□□□ -0.31
SEMA3B-208ENST00000456210 CMC4P56277 68 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-208ENST00000456210 C11orf68Q9H3H3 251 aaKnown RBP13.07□□□□□ -0.32
SEMA3B-208ENST00000456210 DNAJC9-AS1A6NH13 148 aa13.06□□□□□ -0.32
SEMA3B-208ENST00000456210 TRAV23DV6A0A075B6W5 121 aa13.06□□□□□ -0.32
SEMA3B-208ENST00000456210 ENHOQ6UWT2 76 aa13.06□□□□□ -0.32
SEMA3B-208ENST00000456210 FAM19A1Q7Z5A9 133 aa13.06□□□□□ -0.32
SEMA3B-208ENST00000456210 UBL5Q9BZL1 73 aa13.06□□□□□ -0.32
SEMA3B-208ENST00000456210 Q5XG85 94 aa13.05□□□□□ -0.32
SEMA3B-208ENST00000456210 WFDC9Q8NEX5 89 aa13.05□□□□□ -0.32
SEMA3B-208ENST00000456210 BCE1O60756 84 aa13.04□□□□□ -0.32
SEMA3B-208ENST00000456210 CSNK1G2-AS1Q8NCQ2 148 aa13.04□□□□□ -0.32
SEMA3B-208ENST00000456210 INAFM1C9JVW0 142 aa13.04□□□□□ -0.32
SEMA3B-208ENST00000456210 COX17Q14061 63 aa13.04□□□□□ -0.32
SEMA3B-208ENST00000456210 SETD2Q9BYW2 2564 aaPredicted RBP13.03□□□□□ -0.32
SEMA3B-208ENST00000456210 A0A1B0GUV1 79 aa13.03□□□□□ -0.32
SEMA3B-208ENST00000456210 XCL1P47992 114 aa13.03□□□□□ -0.32
SEMA3B-208ENST00000456210 CCL24O00175 119 aa13.02□□□□□ -0.33
SEMA3B-208ENST00000456210 PRR3P79522 188 aaKnown RBP13.01□□□□□ -0.33
SEMA3B-208ENST00000456210 JMJD1CQ15652 2540 aa13□□□□□ -0.33
SEMA3B-208ENST00000456210 LOC110117498A0A087WWA1 95 aa13□□□□□ -0.33
SEMA3B-208ENST00000456210 Q6ZQT0 140 aa13□□□□□ -0.33
SEMA3B-208ENST00000456210 ESM1Q9NQ30 184 aa13□□□□□ -0.33
SEMA3B-208ENST00000456210 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
SEMA3B-208ENST00000456210 KIAA0087Q14695 138 aa12.99□□□□□ -0.33
SEMA3B-208ENST00000456210 C19orf73Q9NVV2 129 aa12.99□□□□□ -0.33
SEMA3B-208ENST00000456210 C4orf26Q17RF5 130 aa12.98□□□□□ -0.33
SEMA3B-208ENST00000456210 NOTCH3Q9UM47 2321 aa12.98□□□□□ -0.33
SEMA3B-208ENST00000456210 IGHV4-28A0A0C4DH34 117 aa12.98□□□□□ -0.33
SEMA3B-208ENST00000456210 RPL35AP18077 110 aaKnown RBP12.98□□□□□ -0.33
SEMA3B-208ENST00000456210 LINC00575Q6W349 94 aa12.98□□□□□ -0.33
SEMA3B-208ENST00000456210 C20orf197Q8N268 126 aa12.98□□□□□ -0.33
SEMA3B-208ENST00000456210 WFDC10AQ9H1F0 79 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms