RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
NIF3L1-209ENST00000454952 D6R8Y8 96 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 ZNF861PO60384 105 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 CKS1BP61024 79 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 RPL23P62829 140 aaKnown RBP4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 KIAA0087Q14695 138 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 ADIRFQ15847 76 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 Q6ZN92 141 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 TEX43Q6ZNM6 134 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 KRTAP11-1Q8IUC1 163 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 TMEM141Q96I45 108 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 NAT8Q9UHE5 227 aa4.8□□□□□ -1.64
NIF3L1-209ENST00000454952 SCGB1D1O95968 90 aa4.79□□□□□ -1.64
NIF3L1-209ENST00000454952 RPL28P46779 137 aaKnown RBP4.79□□□□□ -1.64
NIF3L1-209ENST00000454952 LINC00242Q5T6M2 205 aa4.79□□□□□ -1.64
NIF3L1-209ENST00000454952 ORMDL3Q8N138 153 aa4.79□□□□□ -1.64
NIF3L1-209ENST00000454952 FAM104AQ969W3 186 aa4.79□□□□□ -1.64
NIF3L1-209ENST00000454952 LAMTOR2Q9Y2Q5 125 aa4.79□□□□□ -1.64
NIF3L1-209ENST00000454952 IGLV4-3A0A075B6K6 122 aa4.78□□□□□ -1.64
NIF3L1-209ENST00000454952 NPYP01303 97 aa4.78□□□□□ -1.64
NIF3L1-209ENST00000454952 NPSP0C0P6 89 aa4.78□□□□□ -1.64
NIF3L1-209ENST00000454952 SEC11AP67812 179 aa4.78□□□□□ -1.64
NIF3L1-209ENST00000454952 C9orf129Q5T035 196 aaKnown RBP4.78□□□□□ -1.64
NIF3L1-209ENST00000454952 ATP5L2Q7Z4Y8 100 aa4.78□□□□□ -1.64
NIF3L1-209ENST00000454952 KRTAP7-1Q8IUC3 87 aa4.78□□□□□ -1.64
NIF3L1-209ENST00000454952 TP73-AS1Q9UF72 201 aa4.78□□□□□ -1.64
NIF3L1-209ENST00000454952 A0A1B0GXF2 115 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 CRYGAP11844 174 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 G0S2P27469 103 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 PEA15Q15121 130 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 C6orf226Q5I0X4 101 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 PAPPA-AS1Q5QFB9 102 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 MRPL54Q6P161 138 aaKnown RBP4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 C2orf82Q6UX34 121 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 TMEM136Q6ZRR5 245 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 Q8IZM0 81 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 PRELID3AQ96N28 172 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 VCX2Q9H322 139 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 CYSLTR1Q9Y271 337 aa4.77□□□□□ -1.65
NIF3L1-209ENST00000454952 LPAP08519 4548 aa4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 K7EMI3 77 aa4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 BCE1O60756 84 aa4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 CXCL5P42830 114 aa4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 TYMSOSQ8TAI1 123 aa4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 ALKBH7Q9BT30 221 aaPredicted RBP4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 CTDSP1Q9GZU7 261 aa4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 MAP1LC3AQ9H492 121 aa4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 TOMM7Q9P0U1 55 aa4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 C22orf24Q9Y442 160 aa4.76□□□□□ -1.65
NIF3L1-209ENST00000454952 F8VRH5 84 aa4.75□□□□□ -1.65
NIF3L1-209ENST00000454952 TSPAN13O95857 204 aa4.75□□□□□ -1.65
NIF3L1-209ENST00000454952 HERVK_113P63121 156 aa4.75□□□□□ -1.65
NIF3L1-209ENST00000454952 ORMDL2Q53FV1 153 aa4.75□□□□□ -1.65
NIF3L1-209ENST00000454952 MRPL55Q7Z7F7 128 aaKnown RBP4.75□□□□□ -1.65
NIF3L1-209ENST00000454952 CTAG1AP78358 180 aa4.74□□□□□ -1.65
NIF3L1-209ENST00000454952 C2orf66Q6UXQ4 117 aa4.74□□□□□ -1.65
NIF3L1-209ENST00000454952 FAM19A3Q7Z5A8 133 aa4.74□□□□□ -1.65
NIF3L1-209ENST00000454952 AMELXQ99217 191 aa4.74□□□□□ -1.65
NIF3L1-209ENST00000454952 GEMIN7Q9H840 131 aaKnown RBP4.74□□□□□ -1.65
NIF3L1-209ENST00000454952 XAGE1AQ9HD64 81 aa4.74□□□□□ -1.65
NIF3L1-209ENST00000454952 LOC389332A0A1B0GUA5 103 aa4.73□□□□□ -1.65
NIF3L1-209ENST00000454952 LINC00469Q8N7U9 141 aa4.73□□□□□ -1.65
NIF3L1-209ENST00000454952 Q8N8P6 123 aa4.73□□□□□ -1.65
NIF3L1-209ENST00000454952 NXT2Q9NPJ8 142 aaKnown RBP4.73□□□□□ -1.65
NIF3L1-209ENST00000454952 FAM229BQ4G0N7 80 aa4.72□□□□□ -1.65
NIF3L1-209ENST00000454952 LINC00173Q6ZV60 143 aa4.72□□□□□ -1.65
NIF3L1-209ENST00000454952 A0A087X002 238 aa4.71□□□□□ -1.66
NIF3L1-209ENST00000454952 LINC01549A6NIU2 74 aa4.71□□□□□ -1.66
NIF3L1-209ENST00000454952 IGIPA6NJ69 53 aa4.71□□□□□ -1.66
NIF3L1-209ENST00000454952 C9JQL5 133 aa4.71□□□□□ -1.66
NIF3L1-209ENST00000454952 UBE2AP49459 152 aa4.71□□□□□ -1.66
NIF3L1-209ENST00000454952 NKAPP1Q8N9T2 125 aa4.71□□□□□ -1.66
NIF3L1-209ENST00000454952 TIMM17AQ99595 171 aa4.71□□□□□ -1.66
NIF3L1-209ENST00000454952 IGKV2D-26A0A0A0MRZ7 120 aa4.7□□□□□ -1.66
NIF3L1-209ENST00000454952 MT-ND4LP03901 98 aa4.7□□□□□ -1.66
NIF3L1-209ENST00000454952 PNRC1Q12796 327 aaPredicted RBP4.7□□□□□ -1.66
NIF3L1-209ENST00000454952 PDZD11Q5EBL8 140 aa4.7□□□□□ -1.66
NIF3L1-209ENST00000454952 LINC00304Q8N9R0 145 aa4.7□□□□□ -1.66
NIF3L1-209ENST00000454952 LINC00167Q96N53 147 aa4.7□□□□□ -1.66
NIF3L1-209ENST00000454952 CDKN2A-AS1Q9UH64 79 aa4.7□□□□□ -1.66
NIF3L1-209ENST00000454952 IGLV5-37A0A075B6J1 123 aa4.69□□□□□ -1.66
NIF3L1-209ENST00000454952 RPL37AP8A6NKH3 93 aa4.69□□□□□ -1.66
NIF3L1-209ENST00000454952 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
NIF3L1-209ENST00000454952 ZC2HC1BQ5TFG8 222 aa4.69□□□□□ -1.66
NIF3L1-209ENST00000454952 COX7B2Q8TF08 81 aa4.69□□□□□ -1.66
NIF3L1-209ENST00000454952 TINCRA0A1B0GVN0 87 aa4.68□□□□□ -1.66
NIF3L1-209ENST00000454952 ERASQ7Z444 233 aa4.68□□□□□ -1.66
NIF3L1-209ENST00000454952 TOMM6Q96B49 74 aa4.68□□□□□ -1.66
NIF3L1-209ENST00000454952 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
NIF3L1-209ENST00000454952 IGLV5-45A0A087WSX0 123 aa4.67□□□□□ -1.66
NIF3L1-209ENST00000454952 GAGE10A6NGK3 116 aa4.67□□□□□ -1.66
NIF3L1-209ENST00000454952 SMIM1B2RUZ4 78 aa4.67□□□□□ -1.66
NIF3L1-209ENST00000454952 ATP5LO75964 103 aa4.67□□□□□ -1.66
NIF3L1-209ENST00000454952 KRTAP13-1Q8IUC0 172 aa4.67□□□□□ -1.66
NIF3L1-209ENST00000454952 SCGB3A1Q96QR1 104 aa4.67□□□□□ -1.66
NIF3L1-209ENST00000454952 MUC2Q02817 5179 aa4.67□□□□□ -1.66
NIF3L1-209ENST00000454952 H3BRM9 83 aa4.66□□□□□ -1.66
NIF3L1-209ENST00000454952 KRTAP13-2Q52LG2 175 aa4.66□□□□□ -1.66
NIF3L1-209ENST00000454952 SPAG11AQ6PDA7 123 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms