RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 TMEM223A0PJW6 202 aa7.69□□□□□ -1.18
LINC00339-205ENST00000452322 NDUFA1O15239 70 aa7.69□□□□□ -1.18
LINC00339-205ENST00000452322 IGKCP01834 107 aa7.69□□□□□ -1.18
LINC00339-205ENST00000452322 Q6ZRU5 148 aa7.69□□□□□ -1.18
LINC00339-205ENST00000452322 PMCHL2Q9BQD1 86 aa7.69□□□□□ -1.18
LINC00339-205ENST00000452322 APOBP04114 4563 aaKnown RBP7.68□□□□□ -1.18
LINC00339-205ENST00000452322 CXCL5P42830 114 aa7.68□□□□□ -1.18
LINC00339-205ENST00000452322 KRTAP10-1P60331 282 aa7.68□□□□□ -1.18
LINC00339-205ENST00000452322 LINC01620Q4KN68 170 aa7.68□□□□□ -1.18
LINC00339-205ENST00000452322 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
LINC00339-205ENST00000452322 COX7B2Q8TF08 81 aa7.68□□□□□ -1.18
LINC00339-205ENST00000452322 C20orf202A1L168 122 aa7.67□□□□□ -1.18
LINC00339-205ENST00000452322 CKS1BP61024 79 aa7.67□□□□□ -1.18
LINC00339-205ENST00000452322 RNF151Q2KHN1 245 aa7.67□□□□□ -1.18
LINC00339-205ENST00000452322 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
LINC00339-205ENST00000452322 C10orf25Q5T742 122 aa7.66□□□□□ -1.18
LINC00339-205ENST00000452322 C2orf82Q6UX34 121 aa7.66□□□□□ -1.18
LINC00339-205ENST00000452322 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
LINC00339-205ENST00000452322 PKIGQ9Y2B9 76 aa7.66□□□□□ -1.18
LINC00339-205ENST00000452322 AKR1D1P51857 326 aa7.65□□□□□ -1.18
LINC00339-205ENST00000452322 HERVK_113P61574 105 aa7.65□□□□□ -1.18
LINC00339-205ENST00000452322 SDIM1Q6ZPB5 146 aa7.65□□□□□ -1.18
LINC00339-205ENST00000452322 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
LINC00339-205ENST00000452322 TMA7Q9Y2S6 64 aaKnown RBP7.65□□□□□ -1.18
LINC00339-205ENST00000452322 RYR1P21817 5038 aa7.65□□□□□ -1.18
LINC00339-205ENST00000452322 SFTA2Q6UW10 78 aa7.63□□□□□ -1.19
LINC00339-205ENST00000452322 Q6ZSA8 131 aa7.63□□□□□ -1.19
LINC00339-205ENST00000452322 KIAA1109Q2LD37 5005 aa7.63□□□□□ -1.19
LINC00339-205ENST00000452322 LOC107984640A0A0U1RRK4 108 aa7.62□□□□□ -1.19
LINC00339-205ENST00000452322 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
LINC00339-205ENST00000452322 LEPROTO15243 131 aa7.61□□□□□ -1.19
LINC00339-205ENST00000452322 PLEKHB2Q96CS7 222 aa7.61□□□□□ -1.19
LINC00339-205ENST00000452322 FAM30AQ9NZY2 134 aa7.61□□□□□ -1.19
LINC00339-205ENST00000452322 E9PLD3 99 aa7.6□□□□□ -1.19
LINC00339-205ENST00000452322 CDK2AP2O75956 126 aa7.6□□□□□ -1.19
LINC00339-205ENST00000452322 CIRBPQ14011 172 aaKnown RBP7.6□□□□□ -1.19
LINC00339-205ENST00000452322 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
LINC00339-205ENST00000452322 A0A096LNI7 61 aa7.59□□□□□ -1.19
LINC00339-205ENST00000452322 NDUFC2-KCTD14E9PQ53 114 aa7.59□□□□□ -1.19
LINC00339-205ENST00000452322 PTTG1IPP53801 180 aa7.59□□□□□ -1.19
LINC00339-205ENST00000452322 TSPEAR-AS2P59090 65 aa7.59□□□□□ -1.19
LINC00339-205ENST00000452322 RPL18AQ02543 176 aaKnown RBP7.59□□□□□ -1.19
LINC00339-205ENST00000452322 C9orf116Q5BN46 136 aaPredicted RBP7.59□□□□□ -1.19
LINC00339-205ENST00000452322 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.19
LINC00339-205ENST00000452322 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.59□□□□□ -1.19
LINC00339-205ENST00000452322 HSPG2P98160 4391 aa7.59□□□□□ -1.2
LINC00339-205ENST00000452322 IGKV2-24A0A0C4DH68 120 aa7.59□□□□□ -1.2
LINC00339-205ENST00000452322 PANO1I0J062 215 aa7.59□□□□□ -1.2
LINC00339-205ENST00000452322 J3QQQ9 107 aa7.59□□□□□ -1.2
LINC00339-205ENST00000452322 CHTF8P0CG12 524 aa7.59□□□□□ -1.2
LINC00339-205ENST00000452322 SMCPP49901 116 aaPredicted RBP7.59□□□□□ -1.2
LINC00339-205ENST00000452322 Q6ZRP5 223 aa7.59□□□□□ -1.2
LINC00339-205ENST00000452322 STPG4Q8N801 248 aa7.59□□□□□ -1.2
LINC00339-205ENST00000452322 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.2
LINC00339-205ENST00000452322 LGALS3P17931 250 aaKnown RBP7.58□□□□□ -1.2
LINC00339-205ENST00000452322 NMUP48645 174 aa7.58□□□□□ -1.2
LINC00339-205ENST00000452322 XGP55808 180 aa7.58□□□□□ -1.2
LINC00339-205ENST00000452322 GAGE2BQ13066 116 aa7.58□□□□□ -1.2
LINC00339-205ENST00000452322 ATOH7Q8N100 152 aa7.58□□□□□ -1.2
LINC00339-205ENST00000452322 NDUFA12Q9UI09 145 aa7.58□□□□□ -1.2
LINC00339-205ENST00000452322 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
LINC00339-205ENST00000452322 SCGB1D1O95968 90 aa7.57□□□□□ -1.2
LINC00339-205ENST00000452322 HERV-K104P63124 156 aa7.57□□□□□ -1.2
LINC00339-205ENST00000452322 SCXQ7RTU7 201 aa7.57□□□□□ -1.2
LINC00339-205ENST00000452322 ERG28Q9UKR5 140 aa7.57□□□□□ -1.2
LINC00339-205ENST00000452322 COX17Q14061 63 aa7.56□□□□□ -1.2
LINC00339-205ENST00000452322 MAJINQ3KP22 176 aa7.56□□□□□ -1.2
LINC00339-205ENST00000452322 GAGE2EQ4V326 116 aa7.56□□□□□ -1.2
LINC00339-205ENST00000452322 GAGE2DQ9UEU5 116 aa7.56□□□□□ -1.2
LINC00339-205ENST00000452322 IGKV2D-26A0A0A0MRZ7 120 aa7.55□□□□□ -1.2
LINC00339-205ENST00000452322 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
LINC00339-205ENST00000452322 CIRBP-AS1Q8TBR5 109 aa7.55□□□□□ -1.2
LINC00339-205ENST00000452322 HERC2O95714 4834 aa7.54□□□□□ -1.2
LINC00339-205ENST00000452322 A0A087WYN8 130 aa7.54□□□□□ -1.2
LINC00339-205ENST00000452322 LINC00587B1AMM8 73 aa7.54□□□□□ -1.2
LINC00339-205ENST00000452322 PFN2P35080 140 aa7.54□□□□□ -1.2
LINC00339-205ENST00000452322 HAMPP81172 84 aa7.54□□□□□ -1.2
LINC00339-205ENST00000452322 JOSD1Q15040 202 aaPredicted RBP7.54□□□□□ -1.2
LINC00339-205ENST00000452322 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
LINC00339-205ENST00000452322 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
LINC00339-205ENST00000452322 HSBP1L1C9JCN9 74 aa7.53□□□□□ -1.2
LINC00339-205ENST00000452322 MEIG1Q5JSS6 88 aa7.53□□□□□ -1.2
LINC00339-205ENST00000452322 C4orf48Q5BLP8 95 aa7.52□□□□□ -1.21
LINC00339-205ENST00000452322 C9orf129Q5T035 196 aaKnown RBP7.52□□□□□ -1.21
LINC00339-205ENST00000452322 FAT1Q14517 4588 aa7.52□□□□□ -1.21
LINC00339-205ENST00000452322 ZNF815PA8K554 130 aa7.51□□□□□ -1.21
LINC00339-205ENST00000452322 EPM2AB3EWF7 344 aa7.51□□□□□ -1.21
LINC00339-205ENST00000452322 SMIM13P0DJ93 91 aa7.51□□□□□ -1.21
LINC00339-205ENST00000452322 LINC00158P58513 81 aa7.51□□□□□ -1.21
LINC00339-205ENST00000452322 XAGE1AQ9HD64 81 aa7.51□□□□□ -1.21
LINC00339-205ENST00000452322 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
LINC00339-205ENST00000452322 A0A0U1RRA0 63 aa7.5□□□□□ -1.21
LINC00339-205ENST00000452322 A0A1W2PNN7 141 aa7.5□□□□□ -1.21
LINC00339-205ENST00000452322 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
LINC00339-205ENST00000452322 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
LINC00339-205ENST00000452322 SND1-IT1Q9HBX3 110 aa7.49□□□□□ -1.21
LINC00339-205ENST00000452322 FAM168BA1KXE4 195 aa7.48□□□□□ -1.21
LINC00339-205ENST00000452322 PYY3Q5JQD4 70 aa7.48□□□□□ -1.21
LINC00339-205ENST00000452322 PCP2Q8IVA1 136 aa7.48□□□□□ -1.21
LINC00339-205ENST00000452322 MIR7-3HGQ8N6C7 128 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms