RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 KRTAP26-1Q6PEX3 210 aa5.85□□□□□ -1.47
COL8A1-203ENST00000452013 UBE2D4Q9Y2X8 147 aa5.85□□□□□ -1.47
COL8A1-203ENST00000452013 PYGO1Q9Y3Y4 419 aa5.85□□□□□ -1.47
COL8A1-203ENST00000452013 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.84□□□□□ -1.47
COL8A1-203ENST00000452013 LINC00959A0A1B0GUT2 108 aa5.84□□□□□ -1.47
COL8A1-203ENST00000452013 GAGE12HA6NDE8 117 aa5.84□□□□□ -1.47
COL8A1-203ENST00000452013 USP17L23D6RBM5 183 aa5.84□□□□□ -1.47
COL8A1-203ENST00000452013 WFDC2Q14508 124 aa5.84□□□□□ -1.47
COL8A1-203ENST00000452013 CHCHD10Q8WYQ3 142 aaPredicted RBP5.84□□□□□ -1.47
COL8A1-203ENST00000452013 SPANXA1Q9NS26 97 aa5.84□□□□□ -1.47
COL8A1-203ENST00000452013 NHP2Q9NX24 153 aaKnown RBP5.84□□□□□ -1.47
COL8A1-203ENST00000452013 ZNF815PA8K554 130 aa5.83□□□□□ -1.48
COL8A1-203ENST00000452013 CDK2AP2O75956 126 aa5.83□□□□□ -1.48
COL8A1-203ENST00000452013 FUSP35637 526 aaKnown RBP eCLIP5.83□□□□□ -1.48
COL8A1-203ENST00000452013 PLEKHB2Q96CS7 222 aa5.83□□□□□ -1.48
COL8A1-203ENST00000452013 FRAS1Q86XX4 4008 aa5.83□□□□□ -1.48
COL8A1-203ENST00000452013 PKD1P98161 4303 aa5.83□□□□□ -1.48
COL8A1-203ENST00000452013 RPL39P62891 51 aaKnown RBP5.82□□□□□ -1.48
COL8A1-203ENST00000452013 MRPS36P82909 103 aaKnown RBP5.82□□□□□ -1.48
COL8A1-203ENST00000452013 CD164L2Q6UWJ8 174 aa5.82□□□□□ -1.48
COL8A1-203ENST00000452013 SCGB1D4Q6XE38 83 aa5.82□□□□□ -1.48
COL8A1-203ENST00000452013 RAB37Q96AX2 223 aa5.82□□□□□ -1.48
COL8A1-203ENST00000452013 VPS25Q9BRG1 176 aa5.82□□□□□ -1.48
COL8A1-203ENST00000452013 VCX2Q9H322 139 aa5.82□□□□□ -1.48
COL8A1-203ENST00000452013 BIRC6Q9NR09 4857 aa5.81□□□□□ -1.48
COL8A1-203ENST00000452013 IGLV4-69A0A075B6H9 119 aa5.81□□□□□ -1.48
COL8A1-203ENST00000452013 TRBV20-1A0A075B6N2 111 aa5.81□□□□□ -1.48
COL8A1-203ENST00000452013 TRAV13-1A0A0B4J241 112 aa5.81□□□□□ -1.48
COL8A1-203ENST00000452013 LEPROTO15243 131 aa5.81□□□□□ -1.48
COL8A1-203ENST00000452013 XCL1P47992 114 aa5.81□□□□□ -1.48
COL8A1-203ENST00000452013 PCP4P48539 62 aa5.81□□□□□ -1.48
COL8A1-203ENST00000452013 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
COL8A1-203ENST00000452013 SRSF9Q13242 221 aaKnown RBP eCLIP5.81□□□□□ -1.48
COL8A1-203ENST00000452013 HECTD4Q9Y4D8 3996 aa5.81□□□□□ -1.48
COL8A1-203ENST00000452013 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.8□□□□□ -1.48
COL8A1-203ENST00000452013 LGALS3P17931 250 aaKnown RBP5.8□□□□□ -1.48
COL8A1-203ENST00000452013 UBE2D1P51668 147 aa5.8□□□□□ -1.48
COL8A1-203ENST00000452013 FOXI1Q12951 378 aa5.8□□□□□ -1.48
COL8A1-203ENST00000452013 Q6ZUT4 128 aa5.8□□□□□ -1.48
COL8A1-203ENST00000452013 DNAH11Q96DT5 4516 aa5.79□□□□□ -1.48
COL8A1-203ENST00000452013 IGHV1-58A0A0C4DH39 117 aa5.79□□□□□ -1.48
COL8A1-203ENST00000452013 TMEM238C9JI98 176 aa5.79□□□□□ -1.48
COL8A1-203ENST00000452013 J3QQQ9 107 aa5.79□□□□□ -1.48
COL8A1-203ENST00000452013 MALP21145 153 aa5.79□□□□□ -1.48
COL8A1-203ENST00000452013 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
COL8A1-203ENST00000452013 RNASE13Q5GAN3 156 aaKnown RBP5.79□□□□□ -1.48
COL8A1-203ENST00000452013 OPRPNQ99935 248 aaPredicted RBP5.79□□□□□ -1.48
COL8A1-203ENST00000452013 IGLV4-3A0A075B6K6 122 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 TMEM223A0PJW6 202 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 M0QXV9 152 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 COX7A2LO14548 114 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 APOMO95445 188 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 SCGB1A1P11684 91 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 CNBPP62633 177 aaKnown RBP5.78□□□□□ -1.48
COL8A1-203ENST00000452013 RNF151Q2KHN1 245 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 TMEM170BQ5T4T1 132 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 C9orf163Q8N9P6 203 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 AMELXQ99217 191 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 TTTY13Q9BZ97 58 aa5.78□□□□□ -1.48
COL8A1-203ENST00000452013 DYNC1H1Q14204 4646 aaKnown RBP5.78□□□□□ -1.48
COL8A1-203ENST00000452013 A0A0B4J2C4 111 aa5.77□□□□□ -1.49
COL8A1-203ENST00000452013 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
COL8A1-203ENST00000452013 C15orf56Q8N910 161 aa5.77□□□□□ -1.49
COL8A1-203ENST00000452013 COPS9Q8WXC6 57 aa5.77□□□□□ -1.49
COL8A1-203ENST00000452013 FAM104AQ969W3 186 aa5.77□□□□□ -1.49
COL8A1-203ENST00000452013 GVQW2A0A096LPI5 108 aaPredicted RBP5.76□□□□□ -1.49
COL8A1-203ENST00000452013 TINCRA0A1B0GVN0 87 aa5.76□□□□□ -1.49
COL8A1-203ENST00000452013 H3BMG7 143 aa5.76□□□□□ -1.49
COL8A1-203ENST00000452013 XGP55808 180 aa5.76□□□□□ -1.49
COL8A1-203ENST00000452013 HIGD2BQ4VC39 106 aa5.76□□□□□ -1.49
COL8A1-203ENST00000452013 C5orf38Q86SI9 138 aa5.76□□□□□ -1.49
COL8A1-203ENST00000452013 PPDPFQ9H3Y8 114 aa5.76□□□□□ -1.49
COL8A1-203ENST00000452013 IGHV3-64A0A075B6Q5 118 aa5.75□□□□□ -1.49
COL8A1-203ENST00000452013 IGHV3OR16-9A0A0B4J2B5 98 aa5.75□□□□□ -1.49
COL8A1-203ENST00000452013 A0A0J9YXY3 114 aa5.75□□□□□ -1.49
COL8A1-203ENST00000452013 K7ERJ3 54 aa5.75□□□□□ -1.49
COL8A1-203ENST00000452013 TIMM17BO60830 172 aa5.75□□□□□ -1.49
COL8A1-203ENST00000452013 IFITM1P13164 125 aa5.75□□□□□ -1.49
COL8A1-203ENST00000452013 ZNF22P17026 224 aaPredicted RBP5.75□□□□□ -1.49
COL8A1-203ENST00000452013 LINC01620Q4KN68 170 aa5.75□□□□□ -1.49
COL8A1-203ENST00000452013 FAM30AQ9NZY2 134 aa5.75□□□□□ -1.49
COL8A1-203ENST00000452013 PRO1854Q9UHT4 67 aa5.75□□□□□ -1.49
COL8A1-203ENST00000452013 SLPIP03973 132 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 LINC00242Q5T6M2 205 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 SDIM1Q6ZPB5 146 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 Q6ZSA8 131 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 FAM19A3Q7Z5A8 133 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 LINC01600Q96MT4 127 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 SPANXDQ9BXN6 97 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 SPANXCQ9NY87 97 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 PKIGQ9Y2B9 76 aa5.74□□□□□ -1.49
COL8A1-203ENST00000452013 F8WDY8 70 aa5.73□□□□□ -1.49
COL8A1-203ENST00000452013 TSPAN13O95857 204 aa5.73□□□□□ -1.49
COL8A1-203ENST00000452013 SYCNQ0VAF6 134 aa5.73□□□□□ -1.49
COL8A1-203ENST00000452013 LINC01561Q8N1V8 128 aa5.73□□□□□ -1.49
COL8A1-203ENST00000452013 Q8N1X5 172 aa5.73□□□□□ -1.49
COL8A1-203ENST00000452013 C2orf48Q96LS8 159 aa5.73□□□□□ -1.49
COL8A1-203ENST00000452013 NAA38Q9BRA0 125 aaKnown RBP5.73□□□□□ -1.49
COL8A1-203ENST00000452013 PRO0461Q9UI25 63 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms