RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 PET117Q6UWS5 81 aa15.47■□□□□ 0.07
CPSF4-207ENST00000451876 COX7B2Q8TF08 81 aa15.47■□□□□ 0.07
CPSF4-207ENST00000451876 C6orf226Q5I0X4 101 aa15.46■□□□□ 0.07
CPSF4-207ENST00000451876 SDIM1Q6ZPB5 146 aa15.46■□□□□ 0.07
CPSF4-207ENST00000451876 FAM30AQ9NZY2 134 aa15.46■□□□□ 0.07
CPSF4-207ENST00000451876 IGKCP01834 107 aa15.46■□□□□ 0.06
CPSF4-207ENST00000451876 APOBP04114 4563 aaKnown RBP15.46■□□□□ 0.06
CPSF4-207ENST00000451876 C6orf48Q9UBA6 75 aa15.45■□□□□ 0.06
CPSF4-207ENST00000451876 F8WDY8 70 aa15.44■□□□□ 0.06
CPSF4-207ENST00000451876 DNAH8Q96JB1 4490 aa15.44■□□□□ 0.06
CPSF4-207ENST00000451876 CKS1BP61024 79 aa15.43■□□□□ 0.06
CPSF4-207ENST00000451876 TMA7Q9Y2S6 64 aaKnown RBP15.43■□□□□ 0.06
CPSF4-207ENST00000451876 KIAA1109Q2LD37 5005 aa15.43■□□□□ 0.06
CPSF4-207ENST00000451876 Q6ZSA8 131 aa15.42■□□□□ 0.06
CPSF4-207ENST00000451876 PANO1I0J062 215 aa15.41■□□□□ 0.06
CPSF4-207ENST00000451876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-207ENST00000451876 CHTF8P0CG12 524 aa15.39■□□□□ 0.05
CPSF4-207ENST00000451876 CXCL5P42830 114 aa15.39■□□□□ 0.05
CPSF4-207ENST00000451876 HAMPP81172 84 aa15.39■□□□□ 0.05
CPSF4-207ENST00000451876 RNF151Q2KHN1 245 aa15.39■□□□□ 0.05
CPSF4-207ENST00000451876 C9orf116Q5BN46 136 aaPredicted RBP15.39■□□□□ 0.05
CPSF4-207ENST00000451876 A0A096LNI7 61 aa15.38■□□□□ 0.05
CPSF4-207ENST00000451876 TRBV30A0A0K0K1B3 111 aa15.38■□□□□ 0.05
CPSF4-207ENST00000451876 IGKV2-24A0A0C4DH68 120 aa15.35■□□□□ 0.05
CPSF4-207ENST00000451876 LOC107984640A0A0U1RRK4 108 aa15.35■□□□□ 0.05
CPSF4-207ENST00000451876 XGP55808 180 aa15.35■□□□□ 0.05
CPSF4-207ENST00000451876 C20orf202A1L168 122 aa15.35■□□□□ 0.05
CPSF4-207ENST00000451876 CDK2AP2O75956 126 aa15.34■□□□□ 0.05
CPSF4-207ENST00000451876 TSPEAR-AS2P59090 65 aa15.34■□□□□ 0.05
CPSF4-207ENST00000451876 RPL18AQ02543 176 aaKnown RBP15.34■□□□□ 0.05
CPSF4-207ENST00000451876 HSPG2P98160 4391 aa15.34■□□□□ 0.05
CPSF4-207ENST00000451876 HERVK_113P61574 105 aa15.33■□□□□ 0.04
CPSF4-207ENST00000451876 CIRBPQ14011 172 aaKnown RBP15.33■□□□□ 0.04
CPSF4-207ENST00000451876 Q6ZRP5 223 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 ATOH7Q8N100 152 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 STPG4Q8N801 248 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 SPACA4Q8TDM5 124 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 ZNF625Q96I27 306 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-207ENST00000451876 TLX1NBP0CAT3 122 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 PTTG1IPP53801 180 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 GAGE2BQ13066 116 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 SCXQ7RTU7 201 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 RYR1P21817 5038 aa15.31■□□□□ 0.04
CPSF4-207ENST00000451876 LEPROTO15243 131 aa15.31■□□□□ 0.04
CPSF4-207ENST00000451876 PKIGQ9Y2B9 76 aa15.31■□□□□ 0.04
CPSF4-207ENST00000451876 NDUFC2-KCTD14E9PQ53 114 aa15.29■□□□□ 0.04
CPSF4-207ENST00000451876 E9PLD3 99 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 MAJINQ3KP22 176 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 CIRBP-AS1Q8TBR5 109 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 J3QQQ9 107 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 PLEKHB2Q96CS7 222 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 GAGE2EQ4V326 116 aa15.27■□□□□ 0.03
CPSF4-207ENST00000451876 GAGE2DQ9UEU5 116 aa15.27■□□□□ 0.03
CPSF4-207ENST00000451876 NDUFA12Q9UI09 145 aa15.27■□□□□ 0.03
CPSF4-207ENST00000451876 SFTA2Q6UW10 78 aa15.26■□□□□ 0.03
CPSF4-207ENST00000451876 A0A087WYN8 130 aa15.25■□□□□ 0.03
CPSF4-207ENST00000451876 IGKV2D-26A0A0A0MRZ7 120 aa15.25■□□□□ 0.03
CPSF4-207ENST00000451876 DPH3Q96FX2 82 aa15.25■□□□□ 0.03
CPSF4-207ENST00000451876 LINC00474Q9P2X8 69 aa15.25■□□□□ 0.03
CPSF4-207ENST00000451876 ERG28Q9UKR5 140 aa15.24■□□□□ 0.03
CPSF4-207ENST00000451876 LGALS3P17931 250 aaKnown RBP15.23■□□□□ 0.03
CPSF4-207ENST00000451876 PFN2P35080 140 aa15.23■□□□□ 0.03
CPSF4-207ENST00000451876 ANKRD39Q53RE8 183 aa15.22■□□□□ 0.03
CPSF4-207ENST00000451876 SCGB1D1O95968 90 aa15.21■□□□□ 0.03
CPSF4-207ENST00000451876 AKR1D1P51857 326 aa15.21■□□□□ 0.03
CPSF4-207ENST00000451876 C9orf129Q5T035 196 aaKnown RBP15.21■□□□□ 0.02
CPSF4-207ENST00000451876 XAGE1AQ9HD64 81 aa15.21■□□□□ 0.02
CPSF4-207ENST00000451876 MYMXA0A1B0GTQ4 84 aa15.2■□□□□ 0.02
CPSF4-207ENST00000451876 KRTAP17-1Q9BYP8 105 aa15.2■□□□□ 0.02
CPSF4-207ENST00000451876 PLAC8Q9NZF1 115 aa15.2■□□□□ 0.02
CPSF4-207ENST00000451876 HERV-K104P63124 156 aa15.19■□□□□ 0.02
CPSF4-207ENST00000451876 TTTY13Q9BZ97 58 aa15.19■□□□□ 0.02
CPSF4-207ENST00000451876 A0A1W2PNN7 141 aa15.18■□□□□ 0.02
CPSF4-207ENST00000451876 FAM168BA1KXE4 195 aa15.18■□□□□ 0.02
CPSF4-207ENST00000451876 SMR3BP02814 79 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-207ENST00000451876 NMUP48645 174 aa15.18■□□□□ 0.02
CPSF4-207ENST00000451876 A0A0U1RRA0 63 aa15.17■□□□□ 0.02
CPSF4-207ENST00000451876 COX17Q14061 63 aa15.17■□□□□ 0.02
CPSF4-207ENST00000451876 MEIG1Q5JSS6 88 aa15.16■□□□□ 0.02
CPSF4-207ENST00000451876 SMIM13P0DJ93 91 aa15.15■□□□□ 0.02
CPSF4-207ENST00000451876 FAT1Q14517 4588 aa15.15■□□□□ 0.02
CPSF4-207ENST00000451876 LINC00158P58513 81 aa15.14■□□□□ 0.01
CPSF4-207ENST00000451876 KRTAP7-1Q8IUC3 87 aa15.14■□□□□ 0.01
CPSF4-207ENST00000451876 HERC2O95714 4834 aa15.14■□□□□ 0.01
CPSF4-207ENST00000451876 EPM2AB3EWF7 344 aa15.13■□□□□ 0.01
CPSF4-207ENST00000451876 JOSD1Q15040 202 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-207ENST00000451876 FAM19A5Q7Z5A7 132 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-207ENST00000451876 SND1-IT1Q9HBX3 110 aa15.12■□□□□ 0.01
CPSF4-207ENST00000451876 A0A0J9YXY3 114 aa15.11■□□□□ 0.01
CPSF4-207ENST00000451876 ZNF815PA8K554 130 aa15.11■□□□□ 0.01
CPSF4-207ENST00000451876 SERTAD4-AS1Q5TG53 156 aa15.1■□□□□ 0.01
CPSF4-207ENST00000451876 PCP2Q8IVA1 136 aa15.1■□□□□ 0.01
CPSF4-207ENST00000451876 HSBP1L1C9JCN9 74 aa15.09■□□□□ 0.01
CPSF4-207ENST00000451876 LINC00528Q8N1L1 170 aa15.09■□□□□ 0.01
CPSF4-207ENST00000451876 MIR7-3HGQ8N6C7 128 aa15.09■□□□□ 0.01
CPSF4-207ENST00000451876 DAND5Q8N907 189 aa15.08■□□□□ 0
CPSF4-207ENST00000451876 LINC00587B1AMM8 73 aa15.07■□□□□ 0
CPSF4-207ENST00000451876 PYY3Q5JQD4 70 aa15.07■□□□□ 0
CPSF4-207ENST00000451876 Q8N1X5 172 aa15.06■□□□□ 0
CPSF4-207ENST00000451876 PHF5AQ7RTV0 110 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms