RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 PET117Q6UWS5 81 aa15.47■□□□□ 0.07
CPSF4-207ENST00000451876 COX7B2Q8TF08 81 aa15.47■□□□□ 0.07
CPSF4-207ENST00000451876 C6orf226Q5I0X4 101 aa15.46■□□□□ 0.07
CPSF4-207ENST00000451876 SDIM1Q6ZPB5 146 aa15.46■□□□□ 0.07
CPSF4-207ENST00000451876 FAM30AQ9NZY2 134 aa15.46■□□□□ 0.07
CPSF4-207ENST00000451876 IGKCP01834 107 aa15.46■□□□□ 0.06
CPSF4-207ENST00000451876 APOBP04114 4563 aaKnown RBP15.46■□□□□ 0.06
CPSF4-207ENST00000451876 C6orf48Q9UBA6 75 aa15.45■□□□□ 0.06
CPSF4-207ENST00000451876 F8WDY8 70 aa15.44■□□□□ 0.06
CPSF4-207ENST00000451876 DNAH8Q96JB1 4490 aa15.44■□□□□ 0.06
CPSF4-207ENST00000451876 CKS1BP61024 79 aa15.43■□□□□ 0.06
CPSF4-207ENST00000451876 TMA7Q9Y2S6 64 aaKnown RBP15.43■□□□□ 0.06
CPSF4-207ENST00000451876 KIAA1109Q2LD37 5005 aa15.43■□□□□ 0.06
CPSF4-207ENST00000451876 Q6ZSA8 131 aa15.42■□□□□ 0.06
CPSF4-207ENST00000451876 PANO1I0J062 215 aa15.41■□□□□ 0.06
CPSF4-207ENST00000451876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-207ENST00000451876 CHTF8P0CG12 524 aa15.39■□□□□ 0.05
CPSF4-207ENST00000451876 CXCL5P42830 114 aa15.39■□□□□ 0.05
CPSF4-207ENST00000451876 HAMPP81172 84 aa15.39■□□□□ 0.05
CPSF4-207ENST00000451876 RNF151Q2KHN1 245 aa15.39■□□□□ 0.05
CPSF4-207ENST00000451876 C9orf116Q5BN46 136 aaPredicted RBP15.39■□□□□ 0.05
CPSF4-207ENST00000451876 A0A096LNI7 61 aa15.38■□□□□ 0.05
CPSF4-207ENST00000451876 TRBV30A0A0K0K1B3 111 aa15.38■□□□□ 0.05
CPSF4-207ENST00000451876 IGKV2-24A0A0C4DH68 120 aa15.35■□□□□ 0.05
CPSF4-207ENST00000451876 LOC107984640A0A0U1RRK4 108 aa15.35■□□□□ 0.05
CPSF4-207ENST00000451876 XGP55808 180 aa15.35■□□□□ 0.05
CPSF4-207ENST00000451876 C20orf202A1L168 122 aa15.35■□□□□ 0.05
CPSF4-207ENST00000451876 CDK2AP2O75956 126 aa15.34■□□□□ 0.05
CPSF4-207ENST00000451876 TSPEAR-AS2P59090 65 aa15.34■□□□□ 0.05
CPSF4-207ENST00000451876 RPL18AQ02543 176 aaKnown RBP15.34■□□□□ 0.05
CPSF4-207ENST00000451876 HSPG2P98160 4391 aa15.34■□□□□ 0.05
CPSF4-207ENST00000451876 HERVK_113P61574 105 aa15.33■□□□□ 0.04
CPSF4-207ENST00000451876 CIRBPQ14011 172 aaKnown RBP15.33■□□□□ 0.04
CPSF4-207ENST00000451876 Q6ZRP5 223 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 ATOH7Q8N100 152 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 STPG4Q8N801 248 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 SPACA4Q8TDM5 124 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 ZNF625Q96I27 306 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-207ENST00000451876 TLX1NBP0CAT3 122 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 PTTG1IPP53801 180 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 GAGE2BQ13066 116 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 SCXQ7RTU7 201 aa15.32■□□□□ 0.04
CPSF4-207ENST00000451876 RYR1P21817 5038 aa15.31■□□□□ 0.04
CPSF4-207ENST00000451876 LEPROTO15243 131 aa15.31■□□□□ 0.04
CPSF4-207ENST00000451876 PKIGQ9Y2B9 76 aa15.31■□□□□ 0.04
CPSF4-207ENST00000451876 NDUFC2-KCTD14E9PQ53 114 aa15.29■□□□□ 0.04
CPSF4-207ENST00000451876 E9PLD3 99 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 MAJINQ3KP22 176 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 CIRBP-AS1Q8TBR5 109 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 J3QQQ9 107 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 PLEKHB2Q96CS7 222 aa15.28■□□□□ 0.04
CPSF4-207ENST00000451876 GAGE2EQ4V326 116 aa15.27■□□□□ 0.03
CPSF4-207ENST00000451876 GAGE2DQ9UEU5 116 aa15.27■□□□□ 0.03
CPSF4-207ENST00000451876 NDUFA12Q9UI09 145 aa15.27■□□□□ 0.03
CPSF4-207ENST00000451876 SFTA2Q6UW10 78 aa15.26■□□□□ 0.03
CPSF4-207ENST00000451876 A0A087WYN8 130 aa15.25■□□□□ 0.03
CPSF4-207ENST00000451876 IGKV2D-26A0A0A0MRZ7 120 aa15.25■□□□□ 0.03
CPSF4-207ENST00000451876 DPH3Q96FX2 82 aa15.25■□□□□ 0.03
CPSF4-207ENST00000451876 LINC00474Q9P2X8 69 aa15.25■□□□□ 0.03
CPSF4-207ENST00000451876 ERG28Q9UKR5 140 aa15.24■□□□□ 0.03
CPSF4-207ENST00000451876 LGALS3P17931 250 aaKnown RBP15.23■□□□□ 0.03
CPSF4-207ENST00000451876 PFN2P35080 140 aa15.23■□□□□ 0.03
CPSF4-207ENST00000451876 ANKRD39Q53RE8 183 aa15.22■□□□□ 0.03
CPSF4-207ENST00000451876 SCGB1D1O95968 90 aa15.21■□□□□ 0.03
CPSF4-207ENST00000451876 AKR1D1P51857 326 aa15.21■□□□□ 0.03
CPSF4-207ENST00000451876 C9orf129Q5T035 196 aaKnown RBP15.21■□□□□ 0.02
CPSF4-207ENST00000451876 XAGE1AQ9HD64 81 aa15.21■□□□□ 0.02
CPSF4-207ENST00000451876 MYMXA0A1B0GTQ4 84 aa15.2■□□□□ 0.02
CPSF4-207ENST00000451876 KRTAP17-1Q9BYP8 105 aa15.2■□□□□ 0.02
CPSF4-207ENST00000451876 PLAC8Q9NZF1 115 aa15.2■□□□□ 0.02
CPSF4-207ENST00000451876 HERV-K104P63124 156 aa15.19■□□□□ 0.02
CPSF4-207ENST00000451876 TTTY13Q9BZ97 58 aa15.19■□□□□ 0.02
CPSF4-207ENST00000451876 A0A1W2PNN7 141 aa15.18■□□□□ 0.02
CPSF4-207ENST00000451876 FAM168BA1KXE4 195 aa15.18■□□□□ 0.02
CPSF4-207ENST00000451876 SMR3BP02814 79 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-207ENST00000451876 NMUP48645 174 aa15.18■□□□□ 0.02
CPSF4-207ENST00000451876 A0A0U1RRA0 63 aa15.17■□□□□ 0.02
CPSF4-207ENST00000451876 COX17Q14061 63 aa15.17■□□□□ 0.02
CPSF4-207ENST00000451876 MEIG1Q5JSS6 88 aa15.16■□□□□ 0.02
CPSF4-207ENST00000451876 SMIM13P0DJ93 91 aa15.15■□□□□ 0.02
CPSF4-207ENST00000451876 FAT1Q14517 4588 aa15.15■□□□□ 0.02
CPSF4-207ENST00000451876 LINC00158P58513 81 aa15.14■□□□□ 0.01
CPSF4-207ENST00000451876 KRTAP7-1Q8IUC3 87 aa15.14■□□□□ 0.01
CPSF4-207ENST00000451876 HERC2O95714 4834 aa15.14■□□□□ 0.01
CPSF4-207ENST00000451876 EPM2AB3EWF7 344 aa15.13■□□□□ 0.01
CPSF4-207ENST00000451876 JOSD1Q15040 202 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-207ENST00000451876 FAM19A5Q7Z5A7 132 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-207ENST00000451876 SND1-IT1Q9HBX3 110 aa15.12■□□□□ 0.01
CPSF4-207ENST00000451876 A0A0J9YXY3 114 aa15.11■□□□□ 0.01
CPSF4-207ENST00000451876 ZNF815PA8K554 130 aa15.11■□□□□ 0.01
CPSF4-207ENST00000451876 SERTAD4-AS1Q5TG53 156 aa15.1■□□□□ 0.01
CPSF4-207ENST00000451876 PCP2Q8IVA1 136 aa15.1■□□□□ 0.01
CPSF4-207ENST00000451876 HSBP1L1C9JCN9 74 aa15.09■□□□□ 0.01
CPSF4-207ENST00000451876 LINC00528Q8N1L1 170 aa15.09■□□□□ 0.01
CPSF4-207ENST00000451876 MIR7-3HGQ8N6C7 128 aa15.09■□□□□ 0.01
CPSF4-207ENST00000451876 DAND5Q8N907 189 aa15.08■□□□□ 0
CPSF4-207ENST00000451876 LINC00587B1AMM8 73 aa15.07■□□□□ 0
CPSF4-207ENST00000451876 PYY3Q5JQD4 70 aa15.07■□□□□ 0
CPSF4-207ENST00000451876 Q8N1X5 172 aa15.06■□□□□ 0
CPSF4-207ENST00000451876 PHF5AQ7RTV0 110 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms