RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SPAG11BQ08648 103 aa8.51□□□□□ -1.05
VPS33A-202ENST00000451053 HIGD2BQ4VC39 106 aa8.51□□□□□ -1.05
VPS33A-202ENST00000451053 GVQW2A0A096LPI5 108 aaPredicted RBP8.5□□□□□ -1.05
VPS33A-202ENST00000451053 MYMXA0A1B0GTQ4 84 aa8.5□□□□□ -1.05
VPS33A-202ENST00000451053 F8WDY8 70 aa8.5□□□□□ -1.05
VPS33A-202ENST00000451053 ZNF561-AS1K7EIQ3 104 aa8.5□□□□□ -1.05
VPS33A-202ENST00000451053 DLEU1O43261 78 aa8.5□□□□□ -1.05
VPS33A-202ENST00000451053 C6orf226Q5I0X4 101 aa8.5□□□□□ -1.05
VPS33A-202ENST00000451053 LCE2DQ5TA82 110 aaPredicted RBP8.5□□□□□ -1.05
VPS33A-202ENST00000451053 SLC25A34Q6PIV7 304 aa8.5□□□□□ -1.05
VPS33A-202ENST00000451053 NTN5Q8WTR8 489 aaPredicted RBP8.5□□□□□ -1.05
VPS33A-202ENST00000451053 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
VPS33A-202ENST00000451053 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
VPS33A-202ENST00000451053 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
VPS33A-202ENST00000451053 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
VPS33A-202ENST00000451053 NDUFA1O15239 70 aa8.49□□□□□ -1.05
VPS33A-202ENST00000451053 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
VPS33A-202ENST00000451053 CKS1BP61024 79 aa8.49□□□□□ -1.05
VPS33A-202ENST00000451053 HERV-K104P63124 156 aa8.49□□□□□ -1.05
VPS33A-202ENST00000451053 UQCR10Q9UDW1 63 aa8.49□□□□□ -1.05
VPS33A-202ENST00000451053 NDUFA12Q9UI09 145 aa8.49□□□□□ -1.05
VPS33A-202ENST00000451053 HECTD4Q9Y4D8 3996 aa8.48□□□□□ -1.05
VPS33A-202ENST00000451053 PKD1P98161 4303 aa8.48□□□□□ -1.05
VPS33A-202ENST00000451053 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
VPS33A-202ENST00000451053 BOD1L2Q8IYS8 172 aa8.48□□□□□ -1.05
VPS33A-202ENST00000451053 LINC00526Q96FQ7 95 aa8.48□□□□□ -1.05
VPS33A-202ENST00000451053 C14orf144Q96I85 54 aa8.48□□□□□ -1.05
VPS33A-202ENST00000451053 C2orf48Q96LS8 159 aa8.48□□□□□ -1.05
VPS33A-202ENST00000451053 C16orf90A8MZG2 172 aa8.47□□□□□ -1.05
VPS33A-202ENST00000451053 SLPIP03973 132 aa8.47□□□□□ -1.05
VPS33A-202ENST00000451053 KIAA0087Q14695 138 aa8.47□□□□□ -1.05
VPS33A-202ENST00000451053 LINC00587B1AMM8 73 aa8.46□□□□□ -1.06
VPS33A-202ENST00000451053 LINC01620Q4KN68 170 aa8.46□□□□□ -1.06
VPS33A-202ENST00000451053 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.06
VPS33A-202ENST00000451053 MIEN1Q9BRT3 115 aa8.46□□□□□ -1.06
VPS33A-202ENST00000451053 PRO1933Q9H354 126 aa8.46□□□□□ -1.06
VPS33A-202ENST00000451053 CNBPP62633 177 aaKnown RBP8.45□□□□□ -1.06
VPS33A-202ENST00000451053 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
VPS33A-202ENST00000451053 TTTY13Q9BZ97 58 aa8.45□□□□□ -1.06
VPS33A-202ENST00000451053 GCSHP23434 173 aa8.44□□□□□ -1.06
VPS33A-202ENST00000451053 KRTAP10-1P60331 282 aa8.44□□□□□ -1.06
VPS33A-202ENST00000451053 CIRBPQ14011 172 aaKnown RBP8.44□□□□□ -1.06
VPS33A-202ENST00000451053 CAMK2N2Q96S95 79 aa8.44□□□□□ -1.06
VPS33A-202ENST00000451053 HIGD1BQ9P298 99 aa8.43□□□□□ -1.06
VPS33A-202ENST00000451053 A0A0J9YXY3 114 aa8.42□□□□□ -1.06
VPS33A-202ENST00000451053 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
VPS33A-202ENST00000451053 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
VPS33A-202ENST00000451053 TIMM17BO60830 172 aa8.42□□□□□ -1.06
VPS33A-202ENST00000451053 HNRNPA3P51991 378 aaKnown RBP8.42□□□□□ -1.06
VPS33A-202ENST00000451053 SYCNQ0VAF6 134 aa8.42□□□□□ -1.06
VPS33A-202ENST00000451053 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
VPS33A-202ENST00000451053 C2orf82Q6UX34 121 aa8.42□□□□□ -1.06
VPS33A-202ENST00000451053 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
VPS33A-202ENST00000451053 BIRC6Q9NR09 4857 aa8.42□□□□□ -1.06
VPS33A-202ENST00000451053 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.41□□□□□ -1.06
VPS33A-202ENST00000451053 COX17Q14061 63 aa8.41□□□□□ -1.06
VPS33A-202ENST00000451053 Q6ZRU5 148 aa8.41□□□□□ -1.06
VPS33A-202ENST00000451053 CARD19Q96LW7 228 aa8.41□□□□□ -1.06
VPS33A-202ENST00000451053 DNAH5Q8TE73 4624 aa8.4□□□□□ -1.06
VPS33A-202ENST00000451053 RNF151Q2KHN1 245 aa8.4□□□□□ -1.06
VPS33A-202ENST00000451053 UNQ6190/PRO20217Q6UXQ8 127 aa8.4□□□□□ -1.06
VPS33A-202ENST00000451053 ERG28Q9UKR5 140 aa8.4□□□□□ -1.06
VPS33A-202ENST00000451053 DYNC1H1Q14204 4646 aaKnown RBP8.39□□□□□ -1.07
VPS33A-202ENST00000451053 C10orf25Q5T742 122 aa8.39□□□□□ -1.07
VPS33A-202ENST00000451053 Q6ZVH6 145 aa8.39□□□□□ -1.07
VPS33A-202ENST00000451053 SPANXB1Q9NS25 103 aaPredicted RBP8.39□□□□□ -1.07
VPS33A-202ENST00000451053 TP73-AS1Q9UF72 201 aa8.39□□□□□ -1.07
VPS33A-202ENST00000451053 PKHD1P08F94 4074 aa8.39□□□□□ -1.07
VPS33A-202ENST00000451053 DDTP30046 118 aa8.38□□□□□ -1.07
VPS33A-202ENST00000451053 C2orf91Q6ZV80 131 aa8.38□□□□□ -1.07
VPS33A-202ENST00000451053 COPS9Q8WXC6 57 aa8.38□□□□□ -1.07
VPS33A-202ENST00000451053 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
VPS33A-202ENST00000451053 LINC00158P58513 81 aa8.37□□□□□ -1.07
VPS33A-202ENST00000451053 TAL2Q16559 108 aa8.37□□□□□ -1.07
VPS33A-202ENST00000451053 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
VPS33A-202ENST00000451053 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
VPS33A-202ENST00000451053 SPANXCQ9NY87 97 aa8.37□□□□□ -1.07
VPS33A-202ENST00000451053 FAM30AQ9NZY2 134 aa8.37□□□□□ -1.07
VPS33A-202ENST00000451053 C6orf48Q9UBA6 75 aa8.37□□□□□ -1.07
VPS33A-202ENST00000451053 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
VPS33A-202ENST00000451053 PFN2P35080 140 aa8.36□□□□□ -1.07
VPS33A-202ENST00000451053 SRSF9Q13242 221 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS33A-202ENST00000451053 HSD52Q0P140 79 aa8.35□□□□□ -1.07
VPS33A-202ENST00000451053 Q6ZSA8 131 aa8.35□□□□□ -1.07
VPS33A-202ENST00000451053 HIST1H4GQ99525 98 aa8.35□□□□□ -1.07
VPS33A-202ENST00000451053 LITAFQ99732 161 aa8.35□□□□□ -1.07
VPS33A-202ENST00000451053 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
VPS33A-202ENST00000451053 PANO1I0J062 215 aa8.34□□□□□ -1.07
VPS33A-202ENST00000451053 IFITM1P13164 125 aa8.34□□□□□ -1.07
VPS33A-202ENST00000451053 HAMPP81172 84 aa8.34□□□□□ -1.07
VPS33A-202ENST00000451053 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
VPS33A-202ENST00000451053 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
VPS33A-202ENST00000451053 A0A096LNI7 61 aa8.33□□□□□ -1.08
VPS33A-202ENST00000451053 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
VPS33A-202ENST00000451053 PCP4L1A6NKN8 68 aa8.33□□□□□ -1.08
VPS33A-202ENST00000451053 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
VPS33A-202ENST00000451053 CHTF8P0CG12 524 aa8.33□□□□□ -1.08
VPS33A-202ENST00000451053 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
VPS33A-202ENST00000451053 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
VPS33A-202ENST00000451053 LRP1BQ9NZR2 4599 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms