RNA–Protein interactions for RNA: ENST00000450720.5

ALMS1P1-202, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1P1, Length 1,601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-202ENST00000450720 KIAA1109Q2LD37 5005 aa10.6□□□□□ -0.71
ALMS1P1-202ENST00000450720 IGKV2-24A0A0C4DH68 120 aa10.59□□□□□ -0.71
ALMS1P1-202ENST00000450720 Q6ZSA8 131 aa10.59□□□□□ -0.71
ALMS1P1-202ENST00000450720 CHTF8P0CG12 524 aa10.58□□□□□ -0.72
ALMS1P1-202ENST00000450720 XGP55808 180 aa10.58□□□□□ -0.72
ALMS1P1-202ENST00000450720 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.58□□□□□ -0.72
ALMS1P1-202ENST00000450720 SYS1-DBNDD2H3BUS1 97 aa10.58□□□□□ -0.72
ALMS1P1-202ENST00000450720 PLNP26678 52 aa10.58□□□□□ -0.72
ALMS1P1-202ENST00000450720 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
ALMS1P1-202ENST00000450720 C6orf48Q9UBA6 75 aa10.58□□□□□ -0.72
ALMS1P1-202ENST00000450720 PKIGQ9Y2B9 76 aa10.58□□□□□ -0.72
ALMS1P1-202ENST00000450720 APOBP04114 4563 aaKnown RBP10.57□□□□□ -0.72
ALMS1P1-202ENST00000450720 LOC107984640A0A0U1RRK4 108 aa10.57□□□□□ -0.72
ALMS1P1-202ENST00000450720 PANO1I0J062 215 aa10.57□□□□□ -0.72
ALMS1P1-202ENST00000450720 DPM2O94777 84 aa10.57□□□□□ -0.72
ALMS1P1-202ENST00000450720 S100A2P29034 98 aa10.57□□□□□ -0.72
ALMS1P1-202ENST00000450720 KRTDAPP60985 99 aa10.57□□□□□ -0.72
ALMS1P1-202ENST00000450720 LINC00518Q8N0U6 118 aa10.57□□□□□ -0.72
ALMS1P1-202ENST00000450720 A0A096LNI7 61 aa10.56□□□□□ -0.72
ALMS1P1-202ENST00000450720 CXCL5P42830 114 aa10.56□□□□□ -0.72
ALMS1P1-202ENST00000450720 GAGE2BQ13066 116 aa10.56□□□□□ -0.72
ALMS1P1-202ENST00000450720 IGLV5-39A0A0G2JS06 123 aa10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 TRBV30A0A0K0K1B3 111 aa10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 TMEM223A0PJW6 202 aa10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 IGKCP01834 107 aa10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 RNF151Q2KHN1 245 aa10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 MAJINQ3KP22 176 aa10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 C9orf116Q5BN46 136 aaPredicted RBP10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 SCXQ7RTU7 201 aa10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 C3orf79P0CE67 100 aa10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 HIST3H2BBQ8N257 126 aa10.55□□□□□ -0.72
ALMS1P1-202ENST00000450720 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
ALMS1P1-202ENST00000450720 CIRBP-AS1Q8TBR5 109 aa10.54□□□□□ -0.72
ALMS1P1-202ENST00000450720 SPACA4Q8TDM5 124 aa10.53□□□□□ -0.72
ALMS1P1-202ENST00000450720 RYR1P21817 5038 aa10.53□□□□□ -0.72
ALMS1P1-202ENST00000450720 SMR3BP02814 79 aaPredicted RBP10.52□□□□□ -0.73
ALMS1P1-202ENST00000450720 PTTG1IPP53801 180 aa10.52□□□□□ -0.73
ALMS1P1-202ENST00000450720 SNRPEP62304 92 aaKnown RBP10.52□□□□□ -0.73
ALMS1P1-202ENST00000450720 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
ALMS1P1-202ENST00000450720 GAGE2EQ4V326 116 aa10.51□□□□□ -0.73
ALMS1P1-202ENST00000450720 GAGE2DQ9UEU5 116 aa10.51□□□□□ -0.73
ALMS1P1-202ENST00000450720 CIRBPQ14011 172 aaKnown RBP10.51□□□□□ -0.73
ALMS1P1-202ENST00000450720 LINC01545Q5VT33 79 aa10.51□□□□□ -0.73
ALMS1P1-202ENST00000450720 Q6ZRP5 223 aa10.51□□□□□ -0.73
ALMS1P1-202ENST00000450720 HIST1H2BLQ99880 126 aa10.51□□□□□ -0.73
ALMS1P1-202ENST00000450720 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
ALMS1P1-202ENST00000450720 A0A087WYN8 130 aa10.5□□□□□ -0.73
ALMS1P1-202ENST00000450720 HERVK_113P61574 105 aa10.5□□□□□ -0.73
ALMS1P1-202ENST00000450720 STPG4Q8N801 248 aa10.5□□□□□ -0.73
ALMS1P1-202ENST00000450720 HSPG2P98160 4391 aa10.5□□□□□ -0.73
ALMS1P1-202ENST00000450720 C20orf202A1L168 122 aa10.49□□□□□ -0.73
ALMS1P1-202ENST00000450720 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
ALMS1P1-202ENST00000450720 ZNF625Q96I27 306 aaPredicted RBP10.49□□□□□ -0.73
ALMS1P1-202ENST00000450720 TLX1NBP0CAT3 122 aa10.48□□□□□ -0.73
ALMS1P1-202ENST00000450720 C5orf52A6NGY3 159 aa10.46□□□□□ -0.74
ALMS1P1-202ENST00000450720 LEPROTO15243 131 aa10.46□□□□□ -0.74
ALMS1P1-202ENST00000450720 PFN2P35080 140 aa10.46□□□□□ -0.74
ALMS1P1-202ENST00000450720 SFTA2Q6UW10 78 aa10.46□□□□□ -0.74
ALMS1P1-202ENST00000450720 HERC2O95714 4834 aa10.46□□□□□ -0.74
ALMS1P1-202ENST00000450720 PLEKHB2Q96CS7 222 aa10.45□□□□□ -0.74
ALMS1P1-202ENST00000450720 PLAC8Q9NZF1 115 aa10.45□□□□□ -0.74
ALMS1P1-202ENST00000450720 Q8N1X5 172 aa10.44□□□□□ -0.74
ALMS1P1-202ENST00000450720 XAGE1AQ9HD64 81 aa10.44□□□□□ -0.74
ALMS1P1-202ENST00000450720 NDUFA12Q9UI09 145 aa10.44□□□□□ -0.74
ALMS1P1-202ENST00000450720 J3QQQ9 107 aa10.44□□□□□ -0.74
ALMS1P1-202ENST00000450720 LGALS3P17931 250 aaKnown RBP10.44□□□□□ -0.74
ALMS1P1-202ENST00000450720 TSPEAR-AS2P59090 65 aa10.44□□□□□ -0.74
ALMS1P1-202ENST00000450720 ATOH7Q8N100 152 aa10.44□□□□□ -0.74
ALMS1P1-202ENST00000450720 LINC00528Q8N1L1 170 aa10.44□□□□□ -0.74
ALMS1P1-202ENST00000450720 ERG28Q9UKR5 140 aa10.44□□□□□ -0.74
ALMS1P1-202ENST00000450720 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
ALMS1P1-202ENST00000450720 FAM168BA1KXE4 195 aa10.42□□□□□ -0.74
ALMS1P1-202ENST00000450720 FAM229AH3BQW9 127 aa10.42□□□□□ -0.74
ALMS1P1-202ENST00000450720 KRTAP17-1Q9BYP8 105 aa10.42□□□□□ -0.74
ALMS1P1-202ENST00000450720 MYMXA0A1B0GTQ4 84 aa10.41□□□□□ -0.74
ALMS1P1-202ENST00000450720 E9PLD3 99 aa10.41□□□□□ -0.74
ALMS1P1-202ENST00000450720 C9orf129Q5T035 196 aaKnown RBP10.41□□□□□ -0.74
ALMS1P1-202ENST00000450720 Q5VSD8 79 aa10.41□□□□□ -0.74
ALMS1P1-202ENST00000450720 FAM19A5Q7Z5A7 132 aaPredicted RBP10.41□□□□□ -0.74
ALMS1P1-202ENST00000450720 A0A0U1RRA0 63 aa10.4□□□□□ -0.74
ALMS1P1-202ENST00000450720 EPM2AB3EWF7 344 aa10.4□□□□□ -0.74
ALMS1P1-202ENST00000450720 MEIG1Q5JSS6 88 aa10.4□□□□□ -0.74
ALMS1P1-202ENST00000450720 LINC00158P58513 81 aa10.4□□□□□ -0.75
ALMS1P1-202ENST00000450720 HERV-K104P63124 156 aa10.4□□□□□ -0.75
ALMS1P1-202ENST00000450720 AKR1D1P51857 326 aa10.39□□□□□ -0.75
ALMS1P1-202ENST00000450720 COX17Q14061 63 aa10.39□□□□□ -0.75
ALMS1P1-202ENST00000450720 C7orf33Q8WU49 177 aa10.39□□□□□ -0.75
ALMS1P1-202ENST00000450720 FAT1Q14517 4588 aa10.38□□□□□ -0.75
ALMS1P1-202ENST00000450720 SCGB1D1O95968 90 aa10.37□□□□□ -0.75
ALMS1P1-202ENST00000450720 SMIM6P0DI80 62 aa10.37□□□□□ -0.75
ALMS1P1-202ENST00000450720 NMUP48645 174 aa10.37□□□□□ -0.75
ALMS1P1-202ENST00000450720 C12orf57Q99622 126 aa10.37□□□□□ -0.75
ALMS1P1-202ENST00000450720 SMIM13P0DJ93 91 aa10.36□□□□□ -0.75
ALMS1P1-202ENST00000450720 PLA2G1BP04054 148 aaKnown RBP10.36□□□□□ -0.75
ALMS1P1-202ENST00000450720 IGKV2D-26A0A0A0MRZ7 120 aa10.35□□□□□ -0.75
ALMS1P1-202ENST00000450720 LINC00587B1AMM8 73 aa10.35□□□□□ -0.75
ALMS1P1-202ENST00000450720 M0QXV9 152 aa10.35□□□□□ -0.75
ALMS1P1-202ENST00000450720 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
ALMS1P1-202ENST00000450720 KRTAP4-5Q9BYR2 181 aa10.35□□□□□ -0.75
ALMS1P1-202ENST00000450720 SND1-IT1Q9HBX3 110 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms