RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 HIGD2BQ4VC39 106 aa9.59□□□□□ -0.88
APP-210ENST00000448850 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.88
APP-210ENST00000448850 KMT2CQ8NEZ4 4911 aaKnown RBP9.58□□□□□ -0.88
APP-210ENST00000448850 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
APP-210ENST00000448850 RTL8CO15255 209 aa9.57□□□□□ -0.88
APP-210ENST00000448850 LGALS3P17931 250 aaKnown RBP9.57□□□□□ -0.88
APP-210ENST00000448850 DDTP30046 118 aa9.57□□□□□ -0.88
APP-210ENST00000448850 LINC00526Q96FQ7 95 aa9.57□□□□□ -0.88
APP-210ENST00000448850 TSTD3H0UI37 97 aa9.56□□□□□ -0.88
APP-210ENST00000448850 C14orf177Q52M58 125 aa9.56□□□□□ -0.88
APP-210ENST00000448850 NTN5Q8WTR8 489 aaPredicted RBP9.56□□□□□ -0.88
APP-210ENST00000448850 TTTY13Q9BZ97 58 aa9.56□□□□□ -0.88
APP-210ENST00000448850 FRAS1Q86XX4 4008 aa9.55□□□□□ -0.88
APP-210ENST00000448850 A0A087WTM6 91 aa9.55□□□□□ -0.88
APP-210ENST00000448850 SCGB1A1P11684 91 aa9.55□□□□□ -0.88
APP-210ENST00000448850 CKS1BP61024 79 aa9.55□□□□□ -0.88
APP-210ENST00000448850 PCP2Q8IVA1 136 aa9.55□□□□□ -0.88
APP-210ENST00000448850 C2orf48Q96LS8 159 aa9.55□□□□□ -0.88
APP-210ENST00000448850 NDUFA12Q9UI09 145 aa9.55□□□□□ -0.88
APP-210ENST00000448850 CXCL5P42830 114 aa9.54□□□□□ -0.88
APP-210ENST00000448850 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
APP-210ENST00000448850 RYR2Q92736 4967 aa9.54□□□□□ -0.88
APP-210ENST00000448850 DNAH17Q9UFH2 4485 aa9.54□□□□□ -0.88
APP-210ENST00000448850 ZNF625Q96I27 306 aaPredicted RBP9.54□□□□□ -0.88
APP-210ENST00000448850 MYMXA0A1B0GTQ4 84 aa9.53□□□□□ -0.88
APP-210ENST00000448850 NDUFA1O15239 70 aa9.53□□□□□ -0.88
APP-210ENST00000448850 COX8AP10176 69 aa9.53□□□□□ -0.88
APP-210ENST00000448850 TNP2Q05952 138 aa9.53□□□□□ -0.88
APP-210ENST00000448850 SFTA2Q6UW10 78 aa9.53□□□□□ -0.88
APP-210ENST00000448850 CAMK2N2Q96S95 79 aa9.53□□□□□ -0.88
APP-210ENST00000448850 ZNF815PA8K554 130 aa9.52□□□□□ -0.89
APP-210ENST00000448850 UNQ6190/PRO20217Q6UXQ8 127 aa9.52□□□□□ -0.89
APP-210ENST00000448850 Q8N814 137 aa9.52□□□□□ -0.89
APP-210ENST00000448850 SLPIP03973 132 aa9.51□□□□□ -0.89
APP-210ENST00000448850 SYCNQ0VAF6 134 aa9.51□□□□□ -0.89
APP-210ENST00000448850 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
APP-210ENST00000448850 BOD1L2Q8IYS8 172 aa9.51□□□□□ -0.89
APP-210ENST00000448850 HERV-K104P63124 156 aa9.5□□□□□ -0.89
APP-210ENST00000448850 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.49□□□□□ -0.89
APP-210ENST00000448850 EREGO14944 169 aa9.49□□□□□ -0.89
APP-210ENST00000448850 SLC25A34Q6PIV7 304 aa9.49□□□□□ -0.89
APP-210ENST00000448850 Q6ZRU5 148 aa9.49□□□□□ -0.89
APP-210ENST00000448850 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
APP-210ENST00000448850 A0A0J9YXY3 114 aa9.48□□□□□ -0.89
APP-210ENST00000448850 TRBV30A0A0K0K1B3 111 aa9.48□□□□□ -0.89
APP-210ENST00000448850 CNBPP62633 177 aaKnown RBP9.48□□□□□ -0.89
APP-210ENST00000448850 MTURNQ8N3F0 131 aa9.48□□□□□ -0.89
APP-210ENST00000448850 CARD19Q96LW7 228 aa9.48□□□□□ -0.89
APP-210ENST00000448850 PRO1933Q9H354 126 aa9.48□□□□□ -0.89
APP-210ENST00000448850 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
APP-210ENST00000448850 LINC00336Q6ZUF6 198 aa9.47□□□□□ -0.89
APP-210ENST00000448850 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.47□□□□□ -0.89
APP-210ENST00000448850 SCGB1D4Q6XE38 83 aa9.47□□□□□ -0.89
APP-210ENST00000448850 RNF151Q2KHN1 245 aa9.46□□□□□ -0.9
APP-210ENST00000448850 C5orf47Q569G3 176 aa9.46□□□□□ -0.9
APP-210ENST00000448850 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
APP-210ENST00000448850 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.9
APP-210ENST00000448850 VPS25Q9BRG1 176 aa9.46□□□□□ -0.9
APP-210ENST00000448850 UQCR10Q9UDW1 63 aa9.46□□□□□ -0.9
APP-210ENST00000448850 ERG28Q9UKR5 140 aa9.46□□□□□ -0.9
APP-210ENST00000448850 FAT2Q9NYQ8 4349 aa9.45□□□□□ -0.9
APP-210ENST00000448850 SMIM13P0DJ93 91 aa9.44□□□□□ -0.9
APP-210ENST00000448850 PFN2P35080 140 aa9.44□□□□□ -0.9
APP-210ENST00000448850 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
APP-210ENST00000448850 COX17Q14061 63 aa9.44□□□□□ -0.9
APP-210ENST00000448850 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
APP-210ENST00000448850 A0A0U1RRA0 63 aa9.42□□□□□ -0.9
APP-210ENST00000448850 TIMM17BO60830 172 aa9.42□□□□□ -0.9
APP-210ENST00000448850 LINC00158P58513 81 aa9.42□□□□□ -0.9
APP-210ENST00000448850 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
APP-210ENST00000448850 M0R143 59 aa9.42□□□□□ -0.9
APP-210ENST00000448850 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
APP-210ENST00000448850 LITAFQ99732 161 aa9.42□□□□□ -0.9
APP-210ENST00000448850 HECTD4Q9Y4D8 3996 aa9.41□□□□□ -0.9
APP-210ENST00000448850 HIGD1BQ9P298 99 aa9.41□□□□□ -0.9
APP-210ENST00000448850 RYR3Q15413 4870 aa9.41□□□□□ -0.9
APP-210ENST00000448850 IGLV5-52A0A0A0MRZ9 124 aa9.4□□□□□ -0.9
APP-210ENST00000448850 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.9
APP-210ENST00000448850 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
APP-210ENST00000448850 FUSP35637 526 aaKnown RBP eCLIP9.4□□□□□ -0.9
APP-210ENST00000448850 ADAMTSL4-AS1Q5T5F5 129 aa9.4□□□□□ -0.9
APP-210ENST00000448850 DNAH11Q96DT5 4516 aa9.4□□□□□ -0.91
APP-210ENST00000448850 KRTAP10-2P60368 255 aa9.4□□□□□ -0.91
APP-210ENST00000448850 PKD1P98161 4303 aa9.4□□□□□ -0.91
APP-210ENST00000448850 LOC107984640A0A0U1RRK4 108 aa9.39□□□□□ -0.91
APP-210ENST00000448850 MIR7-3HGQ8N6C7 128 aa9.39□□□□□ -0.91
APP-210ENST00000448850 DAND5Q8N907 189 aa9.39□□□□□ -0.91
APP-210ENST00000448850 HNRNPA3P51991 378 aaKnown RBP9.38□□□□□ -0.91
APP-210ENST00000448850 LINC01620Q4KN68 170 aa9.38□□□□□ -0.91
APP-210ENST00000448850 SPANXB1Q9NS25 103 aaPredicted RBP9.38□□□□□ -0.91
APP-210ENST00000448850 Q6ZRP5 223 aa9.38□□□□□ -0.91
APP-210ENST00000448850 SPANXDQ9BXN6 97 aa9.38□□□□□ -0.91
APP-210ENST00000448850 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
APP-210ENST00000448850 RPL18AQ02543 176 aaKnown RBP9.37□□□□□ -0.91
APP-210ENST00000448850 SRSF9Q13242 221 aaKnown RBP eCLIP9.37□□□□□ -0.91
APP-210ENST00000448850 VAMP3Q15836 100 aa9.37□□□□□ -0.91
APP-210ENST00000448850 PKIGQ9Y2B9 76 aa9.37□□□□□ -0.91
APP-210ENST00000448850 GAGE2EQ4V326 116 aa9.36□□□□□ -0.91
APP-210ENST00000448850 SDIM1Q6ZPB5 146 aa9.36□□□□□ -0.91
APP-210ENST00000448850 Q6ZVH6 145 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 256 ms