RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 NPYP01303 97 aa6.05□□□□□ -1.44
SSBP3-209ENST00000448572 ORMDL2Q53FV1 153 aa6.05□□□□□ -1.44
SSBP3-209ENST00000448572 TMEM136Q6ZRR5 245 aa6.05□□□□□ -1.44
SSBP3-209ENST00000448572 ATP5L2Q7Z4Y8 100 aa6.05□□□□□ -1.44
SSBP3-209ENST00000448572 LINC00469Q8N7U9 141 aa6.05□□□□□ -1.44
SSBP3-209ENST00000448572 NKAPP1Q8N9T2 125 aa6.05□□□□□ -1.44
SSBP3-209ENST00000448572 GEMIN7Q9H840 131 aaKnown RBP6.05□□□□□ -1.44
SSBP3-209ENST00000448572 NAT8Q9UHE5 227 aa6.05□□□□□ -1.44
SSBP3-209ENST00000448572 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
SSBP3-209ENST00000448572 FAM104AQ969W3 186 aa6.04□□□□□ -1.44
SSBP3-209ENST00000448572 PRELID3AQ96N28 172 aa6.04□□□□□ -1.44
SSBP3-209ENST00000448572 MAP1LC3AQ9H492 121 aa6.04□□□□□ -1.44
SSBP3-209ENST00000448572 SRP19P09132 144 aaKnown RBP6.03□□□□□ -1.44
SSBP3-209ENST00000448572 RPL23P62829 140 aaKnown RBP6.03□□□□□ -1.44
SSBP3-209ENST00000448572 MRPL54Q6P161 138 aaKnown RBP6.03□□□□□ -1.44
SSBP3-209ENST00000448572 PRSS47A8MTI9 375 aa6.02□□□□□ -1.45
SSBP3-209ENST00000448572 LINC01547P58512 204 aaPredicted RBP6.02□□□□□ -1.45
SSBP3-209ENST00000448572 C2orf66Q6UXQ4 117 aa6.02□□□□□ -1.45
SSBP3-209ENST00000448572 FAM19A3Q7Z5A8 133 aa6.02□□□□□ -1.45
SSBP3-209ENST00000448572 LINC00337Q8N6G1 96 aa6.02□□□□□ -1.45
SSBP3-209ENST00000448572 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
SSBP3-209ENST00000448572 LINC01549A6NIU2 74 aa6.01□□□□□ -1.45
SSBP3-209ENST00000448572 C4orf48Q5BLP8 95 aa6.01□□□□□ -1.45
SSBP3-209ENST00000448572 FP248Q71RG6 208 aaPredicted RBP6.01□□□□□ -1.45
SSBP3-209ENST00000448572 LINC00167Q96N53 147 aa6.01□□□□□ -1.45
SSBP3-209ENST00000448572 AMELXQ99217 191 aa6.01□□□□□ -1.45
SSBP3-209ENST00000448572 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
SSBP3-209ENST00000448572 A0A1B0GXF2 115 aa6□□□□□ -1.45
SSBP3-209ENST00000448572 RPL37AP8A6NKH3 93 aa6□□□□□ -1.45
SSBP3-209ENST00000448572 PEA15Q15121 130 aa6□□□□□ -1.45
SSBP3-209ENST00000448572 Q8N8P6 123 aa6□□□□□ -1.45
SSBP3-209ENST00000448572 GNB1LQ9BYB4 327 aa6□□□□□ -1.45
SSBP3-209ENST00000448572 PPDPFQ9H3Y8 114 aa6□□□□□ -1.45
SSBP3-209ENST00000448572 NXT2Q9NPJ8 142 aaKnown RBP6□□□□□ -1.45
SSBP3-209ENST00000448572 IGLV5-37A0A075B6J1 123 aa5.99□□□□□ -1.45
SSBP3-209ENST00000448572 PDZD11Q5EBL8 140 aa5.99□□□□□ -1.45
SSBP3-209ENST00000448572 AKAP14Q86UN6 197 aa5.99□□□□□ -1.45
SSBP3-209ENST00000448572 LOC389332A0A1B0GUA5 103 aa5.98□□□□□ -1.45
SSBP3-209ENST00000448572 A0A1B0GVG6 124 aa5.98□□□□□ -1.45
SSBP3-209ENST00000448572 PNRC1Q12796 327 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-209ENST00000448572 TIMM17AQ99595 171 aa5.98□□□□□ -1.45
SSBP3-209ENST00000448572 CDKN2A-AS1Q9UH64 79 aa5.98□□□□□ -1.45
SSBP3-209ENST00000448572 GAGE10A6NGK3 116 aa5.97□□□□□ -1.45
SSBP3-209ENST00000448572 ATP5LO75964 103 aa5.97□□□□□ -1.45
SSBP3-209ENST00000448572 RPL24P83731 157 aaKnown RBP5.97□□□□□ -1.45
SSBP3-209ENST00000448572 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
SSBP3-209ENST00000448572 COX7B2Q8TF08 81 aa5.97□□□□□ -1.45
SSBP3-209ENST00000448572 NDUFA12Q9UI09 145 aa5.97□□□□□ -1.45
SSBP3-209ENST00000448572 ZNF706Q9Y5V0 76 aaPredicted RBP5.97□□□□□ -1.45
SSBP3-209ENST00000448572 IGIPA6NJ69 53 aa5.96□□□□□ -1.46
SSBP3-209ENST00000448572 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.46
SSBP3-209ENST00000448572 FAM19A1Q7Z5A9 133 aa5.96□□□□□ -1.46
SSBP3-209ENST00000448572 KRTAP13-1Q8IUC0 172 aa5.96□□□□□ -1.46
SSBP3-209ENST00000448572 ANAPC11Q9NYG5 84 aa5.96□□□□□ -1.46
SSBP3-209ENST00000448572 IGKV2-28A0A075B6P5 120 aa5.95□□□□□ -1.46
SSBP3-209ENST00000448572 H3BRM9 83 aa5.95□□□□□ -1.46
SSBP3-209ENST00000448572 IGKV2D-28P01615 120 aa5.95□□□□□ -1.46
SSBP3-209ENST00000448572 SFTA2Q6UW10 78 aa5.95□□□□□ -1.46
SSBP3-209ENST00000448572 MRPL18Q9H0U6 180 aaKnown RBP5.95□□□□□ -1.46
SSBP3-209ENST00000448572 TINCRA0A1B0GVN0 87 aa5.94□□□□□ -1.46
SSBP3-209ENST00000448572 SMIM1B2RUZ4 78 aa5.94□□□□□ -1.46
SSBP3-209ENST00000448572 ERASQ7Z444 233 aa5.94□□□□□ -1.46
SSBP3-209ENST00000448572 CBLN2Q8IUK8 224 aa5.94□□□□□ -1.46
SSBP3-209ENST00000448572 FAM19A2Q8N3H0 131 aa5.94□□□□□ -1.46
SSBP3-209ENST00000448572 RAB5BP61020 215 aa5.93□□□□□ -1.46
SSBP3-209ENST00000448572 COX17Q14061 63 aa5.93□□□□□ -1.46
SSBP3-209ENST00000448572 ASB16-AS1Q495Z4 193 aa5.93□□□□□ -1.46
SSBP3-209ENST00000448572 TOMM6Q96B49 74 aa5.93□□□□□ -1.46
SSBP3-209ENST00000448572 TMEM126AQ9H061 195 aa5.93□□□□□ -1.46
SSBP3-209ENST00000448572 SPINK1P00995 79 aa5.92□□□□□ -1.46
SSBP3-209ENST00000448572 MT-ND4LP03901 98 aa5.92□□□□□ -1.46
SSBP3-209ENST00000448572 PRLHP81277 87 aa5.92□□□□□ -1.46
SSBP3-209ENST00000448572 LCE2DQ5TA82 110 aaPredicted RBP5.92□□□□□ -1.46
SSBP3-209ENST00000448572 ZC2HC1BQ5TFG8 222 aa5.92□□□□□ -1.46
SSBP3-209ENST00000448572 ANAPC16Q96DE5 110 aa5.92□□□□□ -1.46
SSBP3-209ENST00000448572 SCGB3A1Q96QR1 104 aa5.92□□□□□ -1.46
SSBP3-209ENST00000448572 IGLV5-45A0A087WSX0 123 aa5.91□□□□□ -1.46
SSBP3-209ENST00000448572 PLEKHB2Q96CS7 222 aa5.91□□□□□ -1.46
SSBP3-209ENST00000448572 HIGD2AQ9BW72 106 aa5.91□□□□□ -1.46
SSBP3-209ENST00000448572 S100A12P80511 92 aa5.9□□□□□ -1.46
SSBP3-209ENST00000448572 DAND5Q8N907 189 aa5.9□□□□□ -1.46
SSBP3-209ENST00000448572 PFN2P35080 140 aa5.89□□□□□ -1.47
SSBP3-209ENST00000448572 PMVKQ15126 192 aa5.88□□□□□ -1.47
SSBP3-209ENST00000448572 C9JQL5 133 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 M0R378 163 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 SPINK8P0C7L1 97 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 VPREB1P12018 145 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 RPS29P62273 56 aaKnown RBP5.87□□□□□ -1.47
SSBP3-209ENST00000448572 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 C3orf22Q8N5N4 141 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 CST9LQ9H4G1 147 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 SND1-IT1Q9HBX3 110 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 ERG28Q9UKR5 140 aa5.87□□□□□ -1.47
SSBP3-209ENST00000448572 TMEM238C9JI98 176 aa5.86□□□□□ -1.47
SSBP3-209ENST00000448572 SRSF3P84103 164 aaKnown RBP5.86□□□□□ -1.47
SSBP3-209ENST00000448572 SPRR4Q96PI1 79 aa5.86□□□□□ -1.47
SSBP3-209ENST00000448572 RAB14P61106 215 aa5.85□□□□□ -1.47
SSBP3-209ENST00000448572 Q8NBF4 154 aa5.85□□□□□ -1.47
SSBP3-209ENST00000448572 SMCO4Q9NRQ5 59 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms