RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 RTL8CO15255 209 aa12.81□□□□□ -0.36
SGCE-207ENST00000447873 SFTA2Q6UW10 78 aa12.81□□□□□ -0.36
SGCE-207ENST00000447873 C2orf48Q96LS8 159 aa12.81□□□□□ -0.36
SGCE-207ENST00000447873 KMT2CQ8NEZ4 4911 aaKnown RBP12.8□□□□□ -0.36
SGCE-207ENST00000447873 A0A087WTM6 91 aa12.8□□□□□ -0.36
SGCE-207ENST00000447873 FRAS1Q86XX4 4008 aa12.8□□□□□ -0.36
SGCE-207ENST00000447873 ZNF625Q96I27 306 aaPredicted RBP12.8□□□□□ -0.36
SGCE-207ENST00000447873 BOD1L2Q8IYS8 172 aa12.79□□□□□ -0.36
SGCE-207ENST00000447873 DNAH17Q9UFH2 4485 aa12.78□□□□□ -0.36
SGCE-207ENST00000447873 F8WDY8 70 aa12.78□□□□□ -0.36
SGCE-207ENST00000447873 SLC25A34Q6PIV7 304 aa12.78□□□□□ -0.36
SGCE-207ENST00000447873 UNQ6190/PRO20217Q6UXQ8 127 aa12.78□□□□□ -0.36
SGCE-207ENST00000447873 HERV-K104P63124 156 aa12.77□□□□□ -0.36
SGCE-207ENST00000447873 SYCNQ0VAF6 134 aa12.77□□□□□ -0.36
SGCE-207ENST00000447873 Q8N814 137 aa12.77□□□□□ -0.36
SGCE-207ENST00000447873 PRO1933Q9H354 126 aa12.77□□□□□ -0.36
SGCE-207ENST00000447873 DLEU1O43261 78 aa12.77□□□□□ -0.37
SGCE-207ENST00000447873 TNP2Q05952 138 aa12.77□□□□□ -0.37
SGCE-207ENST00000447873 C10orf25Q5T742 122 aa12.77□□□□□ -0.37
SGCE-207ENST00000447873 TP73-AS1Q9UF72 201 aa12.77□□□□□ -0.37
SGCE-207ENST00000447873 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.76□□□□□ -0.37
SGCE-207ENST00000447873 SCGB1D4Q6XE38 83 aa12.76□□□□□ -0.37
SGCE-207ENST00000447873 RYR2Q92736 4967 aa12.75□□□□□ -0.37
SGCE-207ENST00000447873 EREGO14944 169 aa12.75□□□□□ -0.37
SGCE-207ENST00000447873 SLPIP03973 132 aa12.75□□□□□ -0.37
SGCE-207ENST00000447873 Q6ZRU5 148 aa12.75□□□□□ -0.37
SGCE-207ENST00000447873 A0A0J9YXY3 114 aa12.74□□□□□ -0.37
SGCE-207ENST00000447873 CARD19Q96LW7 228 aa12.74□□□□□ -0.37
SGCE-207ENST00000447873 UQCR10Q9UDW1 63 aa12.74□□□□□ -0.37
SGCE-207ENST00000447873 TSTD3H0UI37 97 aa12.73□□□□□ -0.37
SGCE-207ENST00000447873 MEIG1Q5JSS6 88 aa12.73□□□□□ -0.37
SGCE-207ENST00000447873 TRBV30A0A0K0K1B3 111 aa12.73□□□□□ -0.37
SGCE-207ENST00000447873 C6orf48Q9UBA6 75 aa12.73□□□□□ -0.37
SGCE-207ENST00000447873 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.72□□□□□ -0.37
SGCE-207ENST00000447873 CNBPP62633 177 aaKnown RBP12.72□□□□□ -0.37
SGCE-207ENST00000447873 ERG28Q9UKR5 140 aa12.72□□□□□ -0.37
SGCE-207ENST00000447873 CIRBPQ14011 172 aaKnown RBP12.71□□□□□ -0.37
SGCE-207ENST00000447873 C9orf116Q5BN46 136 aaPredicted RBP12.71□□□□□ -0.37
SGCE-207ENST00000447873 LINC00587B1AMM8 73 aa12.7□□□□□ -0.38
SGCE-207ENST00000447873 MIEN1Q9BRT3 115 aa12.7□□□□□ -0.38
SGCE-207ENST00000447873 A0A0U1RRA0 63 aa12.69□□□□□ -0.38
SGCE-207ENST00000447873 PFN2P35080 140 aa12.69□□□□□ -0.38
SGCE-207ENST00000447873 RNF151Q2KHN1 245 aa12.69□□□□□ -0.38
SGCE-207ENST00000447873 SMIM13P0DJ93 91 aa12.69□□□□□ -0.38
SGCE-207ENST00000447873 LINC00336Q6ZUF6 198 aa12.69□□□□□ -0.38
SGCE-207ENST00000447873 LINC00158P58513 81 aa12.68□□□□□ -0.38
SGCE-207ENST00000447873 COX17Q14061 63 aa12.68□□□□□ -0.38
SGCE-207ENST00000447873 FAT2Q9NYQ8 4349 aa12.67□□□□□ -0.38
SGCE-207ENST00000447873 TMEM238C9JI98 176 aa12.66□□□□□ -0.38
SGCE-207ENST00000447873 TIMM17BO60830 172 aa12.66□□□□□ -0.38
SGCE-207ENST00000447873 C2orf91Q6ZV80 131 aa12.66□□□□□ -0.38
SGCE-207ENST00000447873 HECTD4Q9Y4D8 3996 aa12.66□□□□□ -0.38
SGCE-207ENST00000447873 HIGD1BQ9P298 99 aa12.65□□□□□ -0.38
SGCE-207ENST00000447873 HNRNPA3P51991 378 aaKnown RBP12.64□□□□□ -0.39
SGCE-207ENST00000447873 ADAMTSL4-AS1Q5T5F5 129 aa12.64□□□□□ -0.39
SGCE-207ENST00000447873 LITAFQ99732 161 aa12.64□□□□□ -0.39
SGCE-207ENST00000447873 IGLV5-52A0A0A0MRZ9 124 aa12.63□□□□□ -0.39
SGCE-207ENST00000447873 NDUFC2-KCTD14E9PQ53 114 aa12.63□□□□□ -0.39
SGCE-207ENST00000447873 DAND5Q8N907 189 aa12.63□□□□□ -0.39
SGCE-207ENST00000447873 C9orf163Q8N9P6 203 aa12.63□□□□□ -0.39
SGCE-207ENST00000447873 FUSP35637 526 aaKnown RBP eCLIP12.62□□□□□ -0.39
SGCE-207ENST00000447873 SRSF9Q13242 221 aaKnown RBP eCLIP12.62□□□□□ -0.39
SGCE-207ENST00000447873 MIR7-3HGQ8N6C7 128 aa12.62□□□□□ -0.39
SGCE-207ENST00000447873 TLX1NBP0CAT3 122 aa12.61□□□□□ -0.39
SGCE-207ENST00000447873 SPANXB1Q9NS25 103 aaPredicted RBP12.61□□□□□ -0.39
SGCE-207ENST00000447873 DNAH11Q96DT5 4516 aa12.6□□□□□ -0.39
SGCE-207ENST00000447873 LOC107984640A0A0U1RRK4 108 aa12.6□□□□□ -0.39
SGCE-207ENST00000447873 RPL18AQ02543 176 aaKnown RBP12.6□□□□□ -0.39
SGCE-207ENST00000447873 HIST1H4GQ99525 98 aa12.6□□□□□ -0.39
SGCE-207ENST00000447873 PKD1P98161 4303 aa12.6□□□□□ -0.39
SGCE-207ENST00000447873 SPANXDQ9BXN6 97 aa12.6□□□□□ -0.39
SGCE-207ENST00000447873 SPANXCQ9NY87 97 aa12.6□□□□□ -0.39
SGCE-207ENST00000447873 KRTAP10-2P60368 255 aa12.59□□□□□ -0.39
SGCE-207ENST00000447873 LINC01620Q4KN68 170 aa12.59□□□□□ -0.39
SGCE-207ENST00000447873 GAGE2EQ4V326 116 aa12.59□□□□□ -0.39
SGCE-207ENST00000447873 Q6ZRP5 223 aa12.59□□□□□ -0.39
SGCE-207ENST00000447873 Q6ZVH6 145 aa12.59□□□□□ -0.39
SGCE-207ENST00000447873 GAGE2DQ9UEU5 116 aa12.59□□□□□ -0.39
SGCE-207ENST00000447873 DDTP30046 118 aa12.58□□□□□ -0.4
SGCE-207ENST00000447873 NPC2P61916 151 aa12.58□□□□□ -0.4
SGCE-207ENST00000447873 PGPEP1Q9NXJ5 209 aa12.58□□□□□ -0.4
SGCE-207ENST00000447873 PKIGQ9Y2B9 76 aa12.58□□□□□ -0.4
SGCE-207ENST00000447873 GAGE2BQ13066 116 aa12.57□□□□□ -0.4
SGCE-207ENST00000447873 SND1-IT1Q9HBX3 110 aa12.57□□□□□ -0.4
SGCE-207ENST00000447873 RYR3Q15413 4870 aa12.57□□□□□ -0.4
SGCE-207ENST00000447873 GCSHP23434 173 aa12.56□□□□□ -0.4
SGCE-207ENST00000447873 XAGE1AQ9HD64 81 aa12.56□□□□□ -0.4
SGCE-207ENST00000447873 PCP4L1A6NKN8 68 aa12.55□□□□□ -0.4
SGCE-207ENST00000447873 IFITM1P13164 125 aa12.55□□□□□ -0.4
SGCE-207ENST00000447873 CTAG1AP78358 180 aa12.55□□□□□ -0.4
SGCE-207ENST00000447873 TAL2Q16559 108 aa12.55□□□□□ -0.4
SGCE-207ENST00000447873 SDIM1Q6ZPB5 146 aa12.55□□□□□ -0.4
SGCE-207ENST00000447873 LINC00308Q8TCZ7 52 aa12.55□□□□□ -0.4
SGCE-207ENST00000447873 COPS9Q8WXC6 57 aa12.55□□□□□ -0.4
SGCE-207ENST00000447873 HSD52Q0P140 79 aa12.54□□□□□ -0.4
SGCE-207ENST00000447873 MUSTN1Q8IVN3 82 aa12.54□□□□□ -0.4
SGCE-207ENST00000447873 PTTG1IPP53801 180 aa12.53□□□□□ -0.4
SGCE-207ENST00000447873 A0A096LNI7 61 aa12.52□□□□□ -0.4
SGCE-207ENST00000447873 IGKV2-24A0A0C4DH68 120 aa12.52□□□□□ -0.4
SGCE-207ENST00000447873 C16orf90A8MZG2 172 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms