RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 UTRNP46939 3433 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 TRBV10-1A0A0K0K1A3 114 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 TRBV6-4A0A1B0GX49 114 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGKV2-29A2NJV5 120 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 A6NDX4 124 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 E7EQL1 145 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 HAMPP81172 84 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 Q1T7F1 81 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 RNASE13Q5GAN3 156 aaKnown RBP2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 SOSTDC1Q6X4U4 206 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 Q8N814 137 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 Q8N9W7 124 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 LINC00467Q9BRT7 94 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 CHCHD7Q9BUK0 85 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 C22orf24Q9Y442 160 aa2.87□□□□□ -1.95
HMGB1P16-201ENST00000447155 K7EMT4 169 aa2.86□□□□□ -1.95
HMGB1P16-201ENST00000447155 NDUFB1O75438 58 aa2.86□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGHV3-53P01767 116 aa2.86□□□□□ -1.95
HMGB1P16-201ENST00000447155 SS18Q15532 418 aa2.86□□□□□ -1.95
HMGB1P16-201ENST00000447155 DEFB114Q30KQ6 69 aa2.86□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGFL2Q6UWQ7 119 aa2.86□□□□□ -1.95
HMGB1P16-201ENST00000447155 Q6ZQT0 140 aa2.86□□□□□ -1.95
HMGB1P16-201ENST00000447155 RHPN1-AS1Q9BWJ2 59 aa2.86□□□□□ -1.95
HMGB1P16-201ENST00000447155 BPY2O14599 106 aa2.85□□□□□ -1.95
HMGB1P16-201ENST00000447155 C5orf56Q8N8D9 126 aa2.85□□□□□ -1.95
HMGB1P16-201ENST00000447155 WFDC9Q8NEX5 89 aa2.85□□□□□ -1.95
HMGB1P16-201ENST00000447155 DEFB104AQ8WTQ1 72 aa2.85□□□□□ -1.95
HMGB1P16-201ENST00000447155 TOMM7Q9P0U1 55 aa2.85□□□□□ -1.95
HMGB1P16-201ENST00000447155 FAM215AQ9Y5M1 114 aa2.85□□□□□ -1.95
HMGB1P16-201ENST00000447155 CADP27708 2225 aa2.85□□□□□ -1.95
HMGB1P16-201ENST00000447155 ABCA1O95477 2261 aa2.85□□□□□ -1.95
HMGB1P16-201ENST00000447155 ICE1Q9Y2F5 2266 aa2.85□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGKV2-28A0A075B6P5 120 aa2.84□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGKV2D-28P01615 120 aa2.84□□□□□ -1.95
HMGB1P16-201ENST00000447155 CCL18P55774 89 aa2.84□□□□□ -1.95
HMGB1P16-201ENST00000447155 COX17Q14061 63 aa2.84□□□□□ -1.95
HMGB1P16-201ENST00000447155 SPINK13Q1W4C9 94 aa2.84□□□□□ -1.95
HMGB1P16-201ENST00000447155 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
HMGB1P16-201ENST00000447155 UNQ9165/PRO28630Q6UXU0 137 aa2.84□□□□□ -1.95
HMGB1P16-201ENST00000447155 NTM-AS1Q6ZSK4 140 aa2.84□□□□□ -1.95
HMGB1P16-201ENST00000447155 LINC00474Q9P2X8 69 aa2.84□□□□□ -1.95
HMGB1P16-201ENST00000447155 POLEQ07864 2286 aa2.84□□□□□ -1.96
HMGB1P16-201ENST00000447155 SPTBN2O15020 2390 aa2.83□□□□□ -1.96
HMGB1P16-201ENST00000447155 IGKV3-7A0A075B6H7 116 aa2.83□□□□□ -1.96
HMGB1P16-201ENST00000447155 hDV103S1A0JD37 113 aa2.83□□□□□ -1.96
HMGB1P16-201ENST00000447155 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
HMGB1P16-201ENST00000447155 REG3AQ06141 175 aa2.83□□□□□ -1.96
HMGB1P16-201ENST00000447155 FDCSPQ8NFU4 85 aa2.83□□□□□ -1.96
HMGB1P16-201ENST00000447155 TM2D3Q9BRN9 247 aa2.83□□□□□ -1.96
HMGB1P16-201ENST00000447155 ABCA4P78363 2273 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 A0A1B0GW54 56 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 G3V318 75 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 COX7BP24311 80 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 PRB3Q04118 309 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 Q8IZM0 81 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 TMEM105Q8N8V8 129 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 C11orf72Q8NBR9 251 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 LINC01560Q8TB33 94 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 LIMD2Q9BT23 127 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 CYP4F30PQ9H0H9 118 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 CDC42SE2Q9NRR3 84 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 CHD7Q9P2D1 2997 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 CHD9Q3L8U1 2897 aa2.82□□□□□ -1.96
HMGB1P16-201ENST00000447155 AHCTF1Q8WYP5 2266 aa2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 IGHV3-73A0A0B4J1V6 119 aa2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 TRAV10A0A0B4J240 114 aa2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 COX6A2Q02221 97 aa2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 IGFL3Q6UXB1 125 aa2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 C7orf65Q6ZTY9 151 aa2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 DIRC1Q969H9 104 aa2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 FAM104AQ969W3 186 aa2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 UNC80Q8N2C7 3258 aa2.81□□□□□ -1.96
HMGB1P16-201ENST00000447155 PTPRQQ9UMZ3 2332 aa2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 MP68P56378 58 aa2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 ELOF1P60002 83 aaKnown RBP2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 DEFB1P60022 68 aa2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 FAM229BQ4G0N7 80 aa2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 LINC00575Q6W349 94 aa2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 ATP11AUNQ6ZP68 121 aa2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 Q8N9L7 120 aa2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 SDK1Q7Z5N4 2213 aa2.8□□□□□ -1.96
HMGB1P16-201ENST00000447155 C5orf42Q9H799 3197 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 TRAV22A0A0B4J277 110 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 A8MTW9 85 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 ZNF73O43830 326 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 LY6HO94772 140 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 IGHV3-11P01762 117 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 HTN1P15515 57 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 KRTAP12-2P59991 146 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 DEFB109BQ30KR1 87 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 C6orf99Q4VX62 202 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 Q6ZQY7 126 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 BPESC1Q9GZL8 116 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 RBM12B-AS1Q9P1G2 102 aa2.79□□□□□ -1.96
HMGB1P16-201ENST00000447155 TRGV1A0A0A0MS02 117 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms