RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TRGC2P03986 189 aa9.29□□□□□ -0.92
HDAC4-204ENST00000446876 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
HDAC4-204ENST00000446876 Q6ZRP5 223 aa9.29□□□□□ -0.92
HDAC4-204ENST00000446876 C7orf33Q8WU49 177 aa9.29□□□□□ -0.92
HDAC4-204ENST00000446876 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
HDAC4-204ENST00000446876 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
HDAC4-204ENST00000446876 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
HDAC4-204ENST00000446876 Q8IZM0 81 aa9.28□□□□□ -0.92
HDAC4-204ENST00000446876 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
HDAC4-204ENST00000446876 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
HDAC4-204ENST00000446876 TLX1NBP0CAT3 122 aa9.27□□□□□ -0.93
HDAC4-204ENST00000446876 CKS1BP61024 79 aa9.27□□□□□ -0.93
HDAC4-204ENST00000446876 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
HDAC4-204ENST00000446876 FAM168BA1KXE4 195 aa9.26□□□□□ -0.93
HDAC4-204ENST00000446876 COLCA2A8K830 154 aa9.26□□□□□ -0.93
HDAC4-204ENST00000446876 SCO1O75880 301 aa9.26□□□□□ -0.93
HDAC4-204ENST00000446876 IGLC3P0DOY3 106 aa9.26□□□□□ -0.93
HDAC4-204ENST00000446876 CHCHD1Q96BP2 118 aaKnown RBP9.26□□□□□ -0.93
HDAC4-204ENST00000446876 FAT3Q8TDW7 4589 aa9.25□□□□□ -0.93
HDAC4-204ENST00000446876 LRP1Q07954 4544 aaKnown RBP9.25□□□□□ -0.93
HDAC4-204ENST00000446876 ATP5LO75964 103 aa9.25□□□□□ -0.93
HDAC4-204ENST00000446876 PRR3P79522 188 aaKnown RBP9.25□□□□□ -0.93
HDAC4-204ENST00000446876 BAGE3Q86Y29 109 aa9.25□□□□□ -0.93
HDAC4-204ENST00000446876 ZNF22P17026 224 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-204ENST00000446876 PHF5AQ7RTV0 110 aaKnown RBP9.24□□□□□ -0.93
HDAC4-204ENST00000446876 FAM19A2Q8N3H0 131 aa9.24□□□□□ -0.93
HDAC4-204ENST00000446876 COX7B2Q8TF08 81 aa9.24□□□□□ -0.93
HDAC4-204ENST00000446876 NDUFC2-KCTD14E9PQ53 114 aa9.23□□□□□ -0.93
HDAC4-204ENST00000446876 LINC00310P59036 64 aa9.23□□□□□ -0.93
HDAC4-204ENST00000446876 FAM19A5Q7Z5A7 132 aaPredicted RBP9.23□□□□□ -0.93
HDAC4-204ENST00000446876 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
HDAC4-204ENST00000446876 C11orf86A6NJI1 115 aa9.22□□□□□ -0.93
HDAC4-204ENST00000446876 F8VRH5 84 aa9.22□□□□□ -0.93
HDAC4-204ENST00000446876 H3BRM9 83 aa9.22□□□□□ -0.93
HDAC4-204ENST00000446876 HSBP1O75506 76 aa9.22□□□□□ -0.93
HDAC4-204ENST00000446876 C9orf129Q5T035 196 aaKnown RBP9.22□□□□□ -0.93
HDAC4-204ENST00000446876 KRTAP29-1A8MX34 341 aaPredicted RBP9.21□□□□□ -0.94
HDAC4-204ENST00000446876 J3QL48 77 aa9.21□□□□□ -0.94
HDAC4-204ENST00000446876 SERF1AO75920 110 aa9.21□□□□□ -0.94
HDAC4-204ENST00000446876 CXCL5P42830 114 aa9.21□□□□□ -0.94
HDAC4-204ENST00000446876 KRTAP7-1Q8IUC3 87 aa9.21□□□□□ -0.94
HDAC4-204ENST00000446876 IFI27L1Q96BM0 104 aa9.21□□□□□ -0.94
HDAC4-204ENST00000446876 HERC1Q15751 4861 aa9.21□□□□□ -0.94
HDAC4-204ENST00000446876 CHTOPQ9Y3Y2 248 aaKnown RBP9.2□□□□□ -0.94
HDAC4-204ENST00000446876 IGLV5-39A0A0G2JS06 123 aa9.19□□□□□ -0.94
HDAC4-204ENST00000446876 NUPR1O60356 82 aa9.19□□□□□ -0.94
HDAC4-204ENST00000446876 TMEM170BQ5T4T1 132 aa9.19□□□□□ -0.94
HDAC4-204ENST00000446876 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
HDAC4-204ENST00000446876 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
HDAC4-204ENST00000446876 H0Y8G0 127 aa9.17□□□□□ -0.94
HDAC4-204ENST00000446876 M0QXV9 152 aa9.17□□□□□ -0.94
HDAC4-204ENST00000446876 PSORS1C2Q9UIG4 136 aa9.17□□□□□ -0.94
HDAC4-204ENST00000446876 TRAV12-1A0A0B4J245 112 aa9.16□□□□□ -0.94
HDAC4-204ENST00000446876 SERTAD4-AS1Q5TG53 156 aa9.16□□□□□ -0.94
HDAC4-204ENST00000446876 OXTP01178 125 aa9.15□□□□□ -0.94
HDAC4-204ENST00000446876 LEPROTL1O95214 131 aa9.14□□□□□ -0.95
HDAC4-204ENST00000446876 FABP4P15090 132 aa9.13□□□□□ -0.95
HDAC4-204ENST00000446876 C1orf137Q5JT78 98 aa9.13□□□□□ -0.95
HDAC4-204ENST00000446876 TMEM223A0PJW6 202 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST1H2BKO60814 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST1H2BJP06899 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST1H2BOP23527 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST1H2BBP33778 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 PFN2P35080 140 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST1H2BDP58876 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST1H2BCP62807 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 UBE2BP63146 152 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 ODF1Q14990 250 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST2H2BEQ16778 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST1H2BHQ93079 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
HDAC4-204ENST00000446876 SRSF9Q13242 221 aaKnown RBP eCLIP9.1□□□□□ -0.957e-6■■■■□ 20
HDAC4-204ENST00000446876 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
HDAC4-204ENST00000446876 HSPB8Q9UJY1 196 aa9.1□□□□□ -0.95
HDAC4-204ENST00000446876 C22orf24Q9Y442 160 aa9.1□□□□□ -0.95
HDAC4-204ENST00000446876 MT1HL1P0DM35 61 aa9.09□□□□□ -0.95
HDAC4-204ENST00000446876 PMCHL2Q9BQD1 86 aa9.09□□□□□ -0.95
HDAC4-204ENST00000446876 ERG28Q9UKR5 140 aa9.09□□□□□ -0.95
HDAC4-204ENST00000446876 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
HDAC4-204ENST00000446876 MRPL55Q7Z7F7 128 aaKnown RBP9.06□□□□□ -0.96
HDAC4-204ENST00000446876 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
HDAC4-204ENST00000446876 GAGE10A6NGK3 116 aa9.05□□□□□ -0.96
HDAC4-204ENST00000446876 SND1-IT1Q9HBX3 110 aa9.05□□□□□ -0.96
HDAC4-204ENST00000446876 PLA2G2DQ9UNK4 145 aa9.05□□□□□ -0.96
HDAC4-204ENST00000446876 TNXBP22105 4242 aa9.04□□□□□ -0.96
HDAC4-204ENST00000446876 DPM2O94777 84 aa9.04□□□□□ -0.96
HDAC4-204ENST00000446876 TSPEAR-AS2P59090 65 aa9.04□□□□□ -0.96
HDAC4-204ENST00000446876 LBHQ53QV2 105 aaPredicted RBP9.04□□□□□ -0.96
HDAC4-204ENST00000446876 MAP1LC3CQ9BXW4 147 aa9.04□□□□□ -0.96
HDAC4-204ENST00000446876 TP73-AS1Q9UF72 201 aa9.04□□□□□ -0.96
HDAC4-204ENST00000446876 RPL37AP8A6NKH3 93 aa9.03□□□□□ -0.96
HDAC4-204ENST00000446876 PLNP26678 52 aa9.03□□□□□ -0.96
HDAC4-204ENST00000446876 COX17Q14061 63 aa9.03□□□□□ -0.96
HDAC4-204ENST00000446876 SFTA2Q6UW10 78 aa9.03□□□□□ -0.96
HDAC4-204ENST00000446876 REG3GQ6UW15 175 aa9.03□□□□□ -0.96
HDAC4-204ENST00000446876 Q8NDZ9 215 aa9.03□□□□□ -0.96
HDAC4-204ENST00000446876 LINC01600Q96MT4 127 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms