RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TMEM30CPA0ZSE6 113 aa1.82□□□□□ -2.12
HMGB1P48-201ENST00000446155 F6UZH7 168 aa1.82□□□□□ -2.12
HMGB1P48-201ENST00000446155 CSAG1Q6PB30 78 aa1.82□□□□□ -2.12
HMGB1P48-201ENST00000446155 ZNF720Q7Z2F6 126 aa1.82□□□□□ -2.12
HMGB1P48-201ENST00000446155 LIMD2Q9BT23 127 aa1.82□□□□□ -2.12
HMGB1P48-201ENST00000446155 SCN3BQ9NY72 215 aa1.82□□□□□ -2.12
HMGB1P48-201ENST00000446155 DNAH3Q8TD57 4116 aa1.82□□□□□ -2.12
HMGB1P48-201ENST00000446155 IGLV3-32A0A0A0MS00 114 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 IGKV3D-7A0A0C4DH55 119 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 IGKV3OR2-268A0A0C4DH90 116 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 PIN1P1O15428 100 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 AKAIN1P0CW23 69 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 IL7P13232 177 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 HIST1H1DP16402 221 aaKnown RBP1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 POLR2JP52435 117 aaKnown RBP1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 BTG2P78543 158 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 DCDP81605 110 aaKnown RBP1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 COPS9Q8WXC6 57 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 PP6455Q8WZ26 134 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 SEC11CQ9BY50 192 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 AGPAT4-IT1Q9H0P7 198 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 WFDC10AQ9H1F0 79 aa1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 PLECQ15149 4684 aaKnown RBP1.81□□□□□ -2.12
HMGB1P48-201ENST00000446155 DNAH10Q8IVF4 4471 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 FRAS1Q86XX4 4008 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 A0A096LNT2 108 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 TRBV6-7A0A0A0MS04 114 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 CXorf51AA0A1B0GTR3 108 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 CCDC179H3BU77 68 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 CORTO00230 105 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 IGLV3-1P01715 115 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 IGKCP01834 107 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 SPTBP11277 2137 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 MRPS10P82664 201 aaKnown RBP1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 GDF5OSQ5U4N7 250 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 OR2T2Q6IF00 324 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 UNQ5815/PRO19632Q6UWF5 114 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 LYPD5Q6UWN5 251 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 PPDPFLQ8WWR9 84 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 RERGLQ9H628 205 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 DNAH7Q8WXX0 4024 aa1.8□□□□□ -2.12
HMGB1P48-201ENST00000446155 MED12Q93074 2177 aa1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 CSMD3Q7Z407 3707 aa1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 TRAV23DV6A0A075B6W5 121 aa1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 DEFB108AA8MXU0 73 aa1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 IGHV3-30P01768 117 aa1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 PIRTP0C851 137 aa1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 IGHV3-30-5P0DP03 117 aa1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 PRB4P10163 310 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 DNAJC13O75165 2243 aa1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 HECTD4Q9Y4D8 3996 aa1.79□□□□□ -2.12
HMGB1P48-201ENST00000446155 IGKV3-7A0A075B6H7 116 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 LCE6AA0A183 80 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 NUPR2A6NF83 97 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 ATP6V1G2-DDX39BF2Z307 99 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 IL5P05113 134 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 GYPBP06028 91 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 SLC25A6P12236 298 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 PDE6GP18545 87 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 IQCJQ1A5X6 159 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 SPANXN1Q5VSR9 72 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 COX14Q96I36 57 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 C12orf57Q99622 126 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 NAA60Q9H7X0 242 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 TMEM242Q9NWH2 141 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 MRPL36Q9P0J6 103 aaKnown RBP1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 NDUFA12Q9UI09 145 aa1.78□□□□□ -2.12
HMGB1P48-201ENST00000446155 TCHHQ07283 1943 aa1.78□□□□□ -2.13
HMGB1P48-201ENST00000446155 IGKV2-40A0A087WW87 121 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 SNAPC5O75971 98 aa1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 IGKV2D-40P01614 121 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 UQCRHP07919 91 aa1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 SPATA45Q537H7 98 aa1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 PLPP5Q8NEB5 264 aa1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 SPTSSAQ969W0 71 aa1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 LINC00526Q96FQ7 95 aa1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 OBSCN-AS1Q96MR7 158 aa1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 TCEAL7Q9BRU2 100 aa1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 BOKQ9UMX3 212 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 DMBT1Q9UGM3 2413 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P48-201ENST00000446155 NDUFB6O95139 128 aa1.76□□□□□ -2.13
HMGB1P48-201ENST00000446155 PIPP12273 146 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P48-201ENST00000446155 DMAC1Q96GE9 116 aa1.76□□□□□ -2.13
HMGB1P48-201ENST00000446155 ODF3Q96PU9 254 aa1.76□□□□□ -2.13
HMGB1P48-201ENST00000446155 ATG5Q9H1Y0 275 aa1.76□□□□□ -2.13
HMGB1P48-201ENST00000446155 C22orf24Q9Y442 160 aa1.76□□□□□ -2.13
HMGB1P48-201ENST00000446155 SERP1Q9Y6X1 66 aa1.76□□□□□ -2.13
HMGB1P48-201ENST00000446155 SNCGO76070 127 aa1.75□□□□□ -2.13
HMGB1P48-201ENST00000446155 GNG4P50150 75 aa1.75□□□□□ -2.13
HMGB1P48-201ENST00000446155 SNRPFP62306 86 aaKnown RBP1.75□□□□□ -2.13
HMGB1P48-201ENST00000446155 DEFB110Q30KQ9 67 aa1.75□□□□□ -2.13
HMGB1P48-201ENST00000446155 Q56UQ5 140 aa1.75□□□□□ -2.13
HMGB1P48-201ENST00000446155 DEFB106AQ8N104 65 aa1.75□□□□□ -2.13
HMGB1P48-201ENST00000446155 TRBV10-1A0A0K0K1A3 114 aa1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 C20orf202A1L168 122 aa1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 MCRIP1C9JLW8 97 aa1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 TFF1P04155 84 aa1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 UBA52P62987 128 aaKnown RBP1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 C10orf105Q8TEF2 133 aa1.74□□□□□ -2.13
HMGB1P48-201ENST00000446155 LSM10Q969L4 123 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms