RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 PPBPP02775 128 aa13.62□□□□□ -0.23
NUP50-211ENST00000445721 MRPL54Q6P161 138 aaKnown RBP13.62□□□□□ -0.23
NUP50-211ENST00000445721 KRTAP13-1Q8IUC0 172 aa13.62□□□□□ -0.23
NUP50-211ENST00000445721 F8VRH5 84 aa13.61□□□□□ -0.23
NUP50-211ENST00000445721 LINC01547P58512 204 aaPredicted RBP13.61□□□□□ -0.23
NUP50-211ENST00000445721 RPL23P62829 140 aaKnown RBP13.61□□□□□ -0.23
NUP50-211ENST00000445721 S100A8P05109 93 aa13.6□□□□□ -0.23
NUP50-211ENST00000445721 ADIRFQ15847 76 aa13.6□□□□□ -0.23
NUP50-211ENST00000445721 VCX2Q9H322 139 aa13.6□□□□□ -0.23
NUP50-211ENST00000445721 FSIP2Q5CZC0 6907 aa13.59□□□□□ -0.23
NUP50-211ENST00000445721 ORMDL3Q8N138 153 aa13.58□□□□□ -0.24
NUP50-211ENST00000445721 PRELID3AQ96N28 172 aa13.58□□□□□ -0.24
NUP50-211ENST00000445721 AMELXQ99217 191 aa13.58□□□□□ -0.24
NUP50-211ENST00000445721 CTAG1AP78358 180 aa13.57□□□□□ -0.24
NUP50-211ENST00000445721 TMEM136Q6ZRR5 245 aa13.57□□□□□ -0.24
NUP50-211ENST00000445721 LOC389332A0A1B0GUA5 103 aa13.55□□□□□ -0.24
NUP50-211ENST00000445721 A0A1B0GXF2 115 aa13.55□□□□□ -0.24
NUP50-211ENST00000445721 PNRC1Q12796 327 aaPredicted RBP13.55□□□□□ -0.24
NUP50-211ENST00000445721 C2orf66Q6UXQ4 117 aa13.55□□□□□ -0.24
NUP50-211ENST00000445721 CDKN2A-AS1Q9UH64 79 aa13.55□□□□□ -0.24
NUP50-211ENST00000445721 CYSLTR1Q9Y271 337 aa13.55□□□□□ -0.24
NUP50-211ENST00000445721 NKAPP1Q8N9T2 125 aa13.53□□□□□ -0.24
NUP50-211ENST00000445721 FAM19A3Q7Z5A8 133 aa13.52□□□□□ -0.25
NUP50-211ENST00000445721 LINC00337Q8N6G1 96 aa13.52□□□□□ -0.25
NUP50-211ENST00000445721 NAT8Q9UHE5 227 aa13.52□□□□□ -0.25
NUP50-211ENST00000445721 CXCL5P42830 114 aa13.51□□□□□ -0.25
NUP50-211ENST00000445721 HERVK_113P63121 156 aa13.51□□□□□ -0.25
NUP50-211ENST00000445721 IGLV5-37A0A075B6J1 123 aa13.5□□□□□ -0.25
NUP50-211ENST00000445721 GEMIN7Q9H840 131 aaKnown RBP13.5□□□□□ -0.25
NUP50-211ENST00000445721 IGKV2-28A0A075B6P5 120 aa13.49□□□□□ -0.25
NUP50-211ENST00000445721 PRSS47A8MTI9 375 aa13.49□□□□□ -0.25
NUP50-211ENST00000445721 IGKV2D-28P01615 120 aa13.49□□□□□ -0.25
NUP50-211ENST00000445721 SEC11AP67812 179 aa13.49□□□□□ -0.25
NUP50-211ENST00000445721 PRLHP81277 87 aa13.49□□□□□ -0.25
NUP50-211ENST00000445721 C3orf22Q8N5N4 141 aa13.49□□□□□ -0.25
NUP50-211ENST00000445721 MAP1LC3AQ9H492 121 aa13.49□□□□□ -0.25
NUP50-211ENST00000445721 IGIPA6NJ69 53 aa13.48□□□□□ -0.25
NUP50-211ENST00000445721 SCO1O75880 301 aa13.48□□□□□ -0.25
NUP50-211ENST00000445721 ASB16-AS1Q495Z4 193 aa13.48□□□□□ -0.25
NUP50-211ENST00000445721 RAB5BP61020 215 aa13.47□□□□□ -0.25
NUP50-211ENST00000445721 Q8N8P6 123 aa13.47□□□□□ -0.25
NUP50-211ENST00000445721 NPSP0C0P6 89 aa13.46□□□□□ -0.25
NUP50-211ENST00000445721 KRTAP4-1Q9BYQ7 146 aa13.46□□□□□ -0.25
NUP50-211ENST00000445721 C9JQL5 133 aa13.45□□□□□ -0.26
NUP50-211ENST00000445721 FP248Q71RG6 208 aaPredicted RBP13.45□□□□□ -0.26
NUP50-211ENST00000445721 FAM19A1Q7Z5A9 133 aa13.45□□□□□ -0.26
NUP50-211ENST00000445721 SRSF3P84103 164 aaKnown RBP13.44□□□□□ -0.26
NUP50-211ENST00000445721 SPAG11AQ6PDA7 123 aa13.44□□□□□ -0.26
NUP50-211ENST00000445721 LAMTOR2Q9Y2Q5 125 aa13.44□□□□□ -0.26
NUP50-211ENST00000445721 KRTAP13-3Q3SY46 172 aa13.43□□□□□ -0.26
NUP50-211ENST00000445721 ORMDL2Q53FV1 153 aa13.43□□□□□ -0.26
NUP50-211ENST00000445721 COX7B2Q8TF08 81 aa13.43□□□□□ -0.26
NUP50-211ENST00000445721 SMIM1B2RUZ4 78 aa13.42□□□□□ -0.26
NUP50-211ENST00000445721 PAPPA-AS1Q5QFB9 102 aa13.42□□□□□ -0.26
NUP50-211ENST00000445721 ATP5L2Q7Z4Y8 100 aa13.42□□□□□ -0.26
NUP50-211ENST00000445721 PLEKHB2Q96CS7 222 aa13.42□□□□□ -0.26
NUP50-211ENST00000445721 TMEM238C9JI98 176 aa13.41□□□□□ -0.26
NUP50-211ENST00000445721 PDZD11Q5EBL8 140 aa13.4□□□□□ -0.26
NUP50-211ENST00000445721 TMEM126AQ9H061 195 aa13.4□□□□□ -0.26
NUP50-211ENST00000445721 SEC61BP60468 96 aaKnown RBP13.38□□□□□ -0.27
NUP50-211ENST00000445721 C4orf48Q5BLP8 95 aa13.38□□□□□ -0.27
NUP50-211ENST00000445721 CBLN2Q8IUK8 224 aa13.38□□□□□ -0.27
NUP50-211ENST00000445721 K7EMI3 77 aa13.35□□□□□ -0.27
NUP50-211ENST00000445721 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
NUP50-211ENST00000445721 M0R378 163 aa13.34□□□□□ -0.27
NUP50-211ENST00000445721 HIGD2AQ9BW72 106 aa13.34□□□□□ -0.27
NUP50-211ENST00000445721 SPINK8P0C7L1 97 aa13.33□□□□□ -0.28
NUP50-211ENST00000445721 PEA15Q15121 130 aa13.33□□□□□ -0.28
NUP50-211ENST00000445721 AKAP14Q86UN6 197 aa13.33□□□□□ -0.28
NUP50-211ENST00000445721 GNB1LQ9BYB4 327 aa13.33□□□□□ -0.28
NUP50-211ENST00000445721 TINCRA0A1B0GVN0 87 aa13.32□□□□□ -0.28
NUP50-211ENST00000445721 VPREB1P12018 145 aa13.32□□□□□ -0.28
NUP50-211ENST00000445721 NXT2Q9NPJ8 142 aaKnown RBP13.32□□□□□ -0.28
NUP50-211ENST00000445721 G0S2P27469 103 aa13.31□□□□□ -0.28
NUP50-211ENST00000445721 PFN2P35080 140 aa13.31□□□□□ -0.28
NUP50-211ENST00000445721 TOMM6Q96B49 74 aa13.31□□□□□ -0.28
NUP50-211ENST00000445721 IGLV5-45A0A087WSX0 123 aa13.3□□□□□ -0.28
NUP50-211ENST00000445721 ATP5LO75964 103 aa13.3□□□□□ -0.28
NUP50-211ENST00000445721 DAND5Q8N907 189 aa13.3□□□□□ -0.28
NUP50-211ENST00000445721 SPRR4Q96PI1 79 aa13.3□□□□□ -0.28
NUP50-211ENST00000445721 Q8NBF4 154 aa13.29□□□□□ -0.28
NUP50-211ENST00000445721 SCGB3A1Q96QR1 104 aa13.29□□□□□ -0.28
NUP50-211ENST00000445721 ERASQ7Z444 233 aa13.28□□□□□ -0.28
NUP50-211ENST00000445721 RPL24P83731 157 aaKnown RBP13.27□□□□□ -0.29
NUP50-211ENST00000445721 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.29
NUP50-211ENST00000445721 ADCYAP1P18509 176 aa13.26□□□□□ -0.29
NUP50-211ENST00000445721 RAB14P61106 215 aa13.25□□□□□ -0.29
NUP50-211ENST00000445721 LCE2CQ5TA81 110 aa13.24□□□□□ -0.29
NUP50-211ENST00000445721 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
NUP50-211ENST00000445721 SPINK1P00995 79 aa13.23□□□□□ -0.29
NUP50-211ENST00000445721 Q8NDZ9 215 aa13.22□□□□□ -0.29
NUP50-211ENST00000445721 ZNF706Q9Y5V0 76 aaPredicted RBP13.22□□□□□ -0.29
NUP50-211ENST00000445721 MRPL18Q9H0U6 180 aaKnown RBP13.21□□□□□ -0.29
NUP50-211ENST00000445721 A0A1B0GVG6 124 aa13.2□□□□□ -0.3
NUP50-211ENST00000445721 H3BRM9 83 aa13.2□□□□□ -0.3
NUP50-211ENST00000445721 ERG28Q9UKR5 140 aa13.2□□□□□ -0.3
NUP50-211ENST00000445721 NDUFA12Q9UI09 145 aa13.19□□□□□ -0.3
NUP50-211ENST00000445721 hCG_2014768A0A024R1R8 64 aa13.18□□□□□ -0.3
NUP50-211ENST00000445721 PMVKQ15126 192 aa13.16□□□□□ -0.3
NUP50-211ENST00000445721 ZNF625Q96I27 306 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms