RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 ALKBH7Q9BT30 221 aaPredicted RBP7.16□□□□□ -1.26
SYNCRIP-203ENST00000444272 FAM231DQ6ZW35 169 aa7.15□□□□□ -1.26
SYNCRIP-203ENST00000444272 LINC01561Q8N1V8 128 aa7.15□□□□□ -1.26
SYNCRIP-203ENST00000444272 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
SYNCRIP-203ENST00000444272 PFDN1O60925 122 aa7.14□□□□□ -1.27
SYNCRIP-203ENST00000444272 MRPS36P82909 103 aaKnown RBP7.14□□□□□ -1.27
SYNCRIP-203ENST00000444272 CENPWQ5EE01 88 aa7.14□□□□□ -1.27
SYNCRIP-203ENST00000444272 GAGE2AQ6NT46 116 aa7.14□□□□□ -1.27
SYNCRIP-203ENST00000444272 Q6ZN92 141 aa7.13□□□□□ -1.27
SYNCRIP-203ENST00000444272 SMCR5Q8TEV8 140 aa7.12□□□□□ -1.27
SYNCRIP-203ENST00000444272 SPANXA1Q9NS26 97 aa7.12□□□□□ -1.27
SYNCRIP-203ENST00000444272 NOL3O60936 208 aaKnown RBP7.11□□□□□ -1.27
SYNCRIP-203ENST00000444272 AKR1C8PQ5T2L2 129 aa7.11□□□□□ -1.27
SYNCRIP-203ENST00000444272 CHTOPQ9Y3Y2 248 aaKnown RBP7.11□□□□□ -1.27
SYNCRIP-203ENST00000444272 SMKR1H3BMG3 65 aa7.1□□□□□ -1.27
SYNCRIP-203ENST00000444272 AKAP14Q86UN6 197 aa7.1□□□□□ -1.27
SYNCRIP-203ENST00000444272 NRACQ8N912 160 aa7.1□□□□□ -1.27
SYNCRIP-203ENST00000444272 LIMD2Q9BT23 127 aa7.1□□□□□ -1.27
SYNCRIP-203ENST00000444272 RAB5BP61020 215 aa7.09□□□□□ -1.27
SYNCRIP-203ENST00000444272 SUMO2P61956 95 aaKnown RBP7.09□□□□□ -1.27
SYNCRIP-203ENST00000444272 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
SYNCRIP-203ENST00000444272 TRBV20OR9-2A0A075B6H5 130 aa7.08□□□□□ -1.28
SYNCRIP-203ENST00000444272 VPREB1P12018 145 aa7.08□□□□□ -1.28
SYNCRIP-203ENST00000444272 NUDT10Q8NFP7 164 aa7.08□□□□□ -1.28
SYNCRIP-203ENST00000444272 NUDT11Q96G61 164 aa7.08□□□□□ -1.28
SYNCRIP-203ENST00000444272 C9orf153Q5TBE3 101 aa7.07□□□□□ -1.28
SYNCRIP-203ENST00000444272 FAM19A3Q7Z5A8 133 aa7.07□□□□□ -1.28
SYNCRIP-203ENST00000444272 A0A1B0GV50 99 aa7.06□□□□□ -1.28
SYNCRIP-203ENST00000444272 RAB4AP20338 218 aa7.06□□□□□ -1.28
SYNCRIP-203ENST00000444272 KIAA1644Q3SXP7 199 aa7.06□□□□□ -1.28
SYNCRIP-203ENST00000444272 RPL7L1Q6DKI1 246 aaKnown RBP7.06□□□□□ -1.28
SYNCRIP-203ENST00000444272 MED9Q9NWA0 146 aa7.06□□□□□ -1.28
SYNCRIP-203ENST00000444272 FAM240BA0A1B0GVZ2 78 aa7.05□□□□□ -1.28
SYNCRIP-203ENST00000444272 CXCL5P42830 114 aa7.05□□□□□ -1.28
SYNCRIP-203ENST00000444272 GNG4P50150 75 aa7.04□□□□□ -1.28
SYNCRIP-203ENST00000444272 HRCT1Q6UXD1 115 aa7.04□□□□□ -1.28
SYNCRIP-203ENST00000444272 AMN1Q8IY45 258 aa7.04□□□□□ -1.28
SYNCRIP-203ENST00000444272 SMIM12Q96EX1 92 aa7.03□□□□□ -1.28
SYNCRIP-203ENST00000444272 TMEM191AQ9H0A3 160 aa7.02□□□□□ -1.29
SYNCRIP-203ENST00000444272 IGLV4-3A0A075B6K6 122 aa7.01□□□□□ -1.29
SYNCRIP-203ENST00000444272 IFI27P40305 119 aaPredicted RBP7.01□□□□□ -1.29
SYNCRIP-203ENST00000444272 KCNRGQ8N5I3 272 aa7.01□□□□□ -1.29
SYNCRIP-203ENST00000444272 C11orf52Q96A22 123 aa7.01□□□□□ -1.29
SYNCRIP-203ENST00000444272 BIN3Q9NQY0 253 aa7.01□□□□□ -1.29
SYNCRIP-203ENST00000444272 TRBV20-1A0A075B6N2 111 aa7□□□□□ -1.29
SYNCRIP-203ENST00000444272 PPP1R2P9O14990 202 aa7□□□□□ -1.29
SYNCRIP-203ENST00000444272 CCL20P78556 96 aa7□□□□□ -1.29
SYNCRIP-203ENST00000444272 Q8NDZ9 215 aa7□□□□□ -1.29
SYNCRIP-203ENST00000444272 BORCS7-ASMTA0A0B4J1R7 106 aa6.99□□□□□ -1.29
SYNCRIP-203ENST00000444272 PPP1R17O96001 155 aa6.99□□□□□ -1.29
SYNCRIP-203ENST00000444272 RAB14P61106 215 aa6.99□□□□□ -1.29
SYNCRIP-203ENST00000444272 RPL24P83731 157 aaKnown RBP6.99□□□□□ -1.29
SYNCRIP-203ENST00000444272 ZC2HC1BQ5TFG8 222 aa6.99□□□□□ -1.29
SYNCRIP-203ENST00000444272 TEX43Q6ZNM6 134 aa6.99□□□□□ -1.29
SYNCRIP-203ENST00000444272 ATP11AUNQ6ZP68 121 aa6.99□□□□□ -1.29
SYNCRIP-203ENST00000444272 SFT2D1Q8WV19 159 aa6.99□□□□□ -1.29
SYNCRIP-203ENST00000444272 TMEM141Q96I45 108 aa6.99□□□□□ -1.29
SYNCRIP-203ENST00000444272 TCAPO15273 167 aa6.97□□□□□ -1.29
SYNCRIP-203ENST00000444272 SSNA1O43805 119 aa6.97□□□□□ -1.29
SYNCRIP-203ENST00000444272 C2orf88Q9BSF0 95 aa6.97□□□□□ -1.29
SYNCRIP-203ENST00000444272 ERC2-IT1O76042 136 aa6.96□□□□□ -1.3
SYNCRIP-203ENST00000444272 GIPP09681 153 aaPredicted RBP6.96□□□□□ -1.3
SYNCRIP-203ENST00000444272 EIF5A2Q9GZV4 153 aaKnown RBP6.96□□□□□ -1.3
SYNCRIP-203ENST00000444272 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
SYNCRIP-203ENST00000444272 FAM236DA0A1B0GTK5 79 aa6.95□□□□□ -1.3
SYNCRIP-203ENST00000444272 A6NN06 94 aa6.95□□□□□ -1.3
SYNCRIP-203ENST00000444272 FAM236CP0DP71 79 aa6.95□□□□□ -1.3
SYNCRIP-203ENST00000444272 SPRR2EP22531 72 aa6.95□□□□□ -1.3
SYNCRIP-203ENST00000444272 SPRR2BP35325 72 aa6.95□□□□□ -1.3
SYNCRIP-203ENST00000444272 SPRR2AP35326 72 aa6.95□□□□□ -1.3
SYNCRIP-203ENST00000444272 BORCS7Q96B45 105 aa6.95□□□□□ -1.3
SYNCRIP-203ENST00000444272 A8MWL6 223 aa6.94□□□□□ -1.3
SYNCRIP-203ENST00000444272 PFN2P35080 140 aa6.94□□□□□ -1.3
SYNCRIP-203ENST00000444272 Q8N9P0 234 aaPredicted RBP6.94□□□□□ -1.3
SYNCRIP-203ENST00000444272 SND1-IT1Q9HBX3 110 aa6.94□□□□□ -1.3
SYNCRIP-203ENST00000444272 PYGO1Q9Y3Y4 419 aa6.94□□□□□ -1.3
SYNCRIP-203ENST00000444272 ETDCA0A1B0GVM5 59 aa6.93□□□□□ -1.3
SYNCRIP-203ENST00000444272 PRSS47A8MTI9 375 aa6.93□□□□□ -1.3
SYNCRIP-203ENST00000444272 COX7B2Q8TF08 81 aa6.93□□□□□ -1.3
SYNCRIP-203ENST00000444272 C6orf99Q4VX62 202 aa6.92□□□□□ -1.3
SYNCRIP-203ENST00000444272 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
SYNCRIP-203ENST00000444272 C20orf78Q9BR46 151 aa6.92□□□□□ -1.3
SYNCRIP-203ENST00000444272 K7EN84 100 aa6.91□□□□□ -1.3
SYNCRIP-203ENST00000444272 PRYO14603 147 aa6.91□□□□□ -1.3
SYNCRIP-203ENST00000444272 FAM213BQ8TBF2 198 aa6.91□□□□□ -1.3
SYNCRIP-203ENST00000444272 SMIM2Q9BVW6 85 aa6.91□□□□□ -1.3
SYNCRIP-203ENST00000444272 A0A1B0GUT8 65 aa6.9□□□□□ -1.3
SYNCRIP-203ENST00000444272 SPRR1AP35321 89 aa6.9□□□□□ -1.3
SYNCRIP-203ENST00000444272 HERVK_113P63121 156 aa6.9□□□□□ -1.3
SYNCRIP-203ENST00000444272 C1orf195Q5TG92 126 aa6.9□□□□□ -1.3
SYNCRIP-203ENST00000444272 ENKURQ8TC29 256 aa6.9□□□□□ -1.3
SYNCRIP-203ENST00000444272 SMIM1B2RUZ4 78 aa6.89□□□□□ -1.31
SYNCRIP-203ENST00000444272 GATCO43716 136 aaKnown RBP6.88□□□□□ -1.31
SYNCRIP-203ENST00000444272 AMELXQ99217 191 aa6.88□□□□□ -1.31
SYNCRIP-203ENST00000444272 GNG13Q9P2W3 67 aa6.88□□□□□ -1.31
SYNCRIP-203ENST00000444272 TRBV24-1A0A075B6N3 115 aa6.87□□□□□ -1.31
SYNCRIP-203ENST00000444272 H7C2G1 150 aa6.87□□□□□ -1.31
SYNCRIP-203ENST00000444272 TAGLN2P37802 199 aaKnown RBP6.87□□□□□ -1.31
SYNCRIP-203ENST00000444272 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
SYNCRIP-203ENST00000444272 VCX2Q9H322 139 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms