RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 HMCN2Q8NDA2 5059 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 A0A087WZ39 114 aa8.85□□□□□ -0.99
TREX1-202ENST00000444177 LINC00310P59036 64 aa8.85□□□□□ -0.99
TREX1-202ENST00000444177 HERVK_113P63121 156 aa8.85□□□□□ -0.99
TREX1-202ENST00000444177 CST9LQ9H4G1 147 aa8.85□□□□□ -0.99
TREX1-202ENST00000444177 LINC00474Q9P2X8 69 aa8.85□□□□□ -0.99
TREX1-202ENST00000444177 LOC107984640A0A0U1RRK4 108 aa8.84□□□□□ -0.99
TREX1-202ENST00000444177 TINCRA0A1B0GVN0 87 aa8.83□□□□□ -1
TREX1-202ENST00000444177 RPL18AQ02543 176 aaKnown RBP8.83□□□□□ -1
TREX1-202ENST00000444177 GAGE2BQ13066 116 aa8.83□□□□□ -1
TREX1-202ENST00000444177 C7orf33Q8WU49 177 aa8.83□□□□□ -1
TREX1-202ENST00000444177 IGLV5-45A0A087WSX0 123 aa8.82□□□□□ -1
TREX1-202ENST00000444177 A0A0J9YXV3 536 aa8.82□□□□□ -1
TREX1-202ENST00000444177 F8WDY8 70 aa8.82□□□□□ -1
TREX1-202ENST00000444177 NDUFA1O15239 70 aa8.82□□□□□ -1
TREX1-202ENST00000444177 PTTG1IPP53801 180 aa8.82□□□□□ -1
TREX1-202ENST00000444177 COA6Q5JTJ3 125 aaKnown RBP8.82□□□□□ -1
TREX1-202ENST00000444177 FAM19A2Q8N3H0 131 aa8.82□□□□□ -1
TREX1-202ENST00000444177 IFI27L1Q96BM0 104 aa8.82□□□□□ -1
TREX1-202ENST00000444177 GEMIN7Q9H840 131 aaKnown RBP8.82□□□□□ -1
TREX1-202ENST00000444177 TRAV12-1A0A0B4J245 112 aa8.81□□□□□ -1
TREX1-202ENST00000444177 LEPROTL1O95214 131 aa8.81□□□□□ -1
TREX1-202ENST00000444177 PACRGQ96M98 296 aaPredicted RBP8.81□□□□□ -1
TREX1-202ENST00000444177 NUPR1O60356 82 aa8.8□□□□□ -1
TREX1-202ENST00000444177 IGLC3P0DOY3 106 aa8.8□□□□□ -1
TREX1-202ENST00000444177 MRPL35Q9NZE8 188 aaKnown RBP8.8□□□□□ -1
TREX1-202ENST00000444177 HSPB8Q9UJY1 196 aa8.8□□□□□ -1
TREX1-202ENST00000444177 CDKN2A-AS1Q9UH64 79 aa8.79□□□□□ -1
TREX1-202ENST00000444177 NDUFA6P56556 154 aa8.78□□□□□ -1
TREX1-202ENST00000444177 RNF151Q2KHN1 245 aa8.78□□□□□ -1
TREX1-202ENST00000444177 C10orf25Q5T742 122 aa8.78□□□□□ -1
TREX1-202ENST00000444177 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
TREX1-202ENST00000444177 C6orf48Q9UBA6 75 aa8.78□□□□□ -1
TREX1-202ENST00000444177 PRSS2P07478 247 aa8.77□□□□□ -1.01
TREX1-202ENST00000444177 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
TREX1-202ENST00000444177 LINC00469Q8N7U9 141 aa8.77□□□□□ -1.01
TREX1-202ENST00000444177 TOMM7Q9P0U1 55 aa8.77□□□□□ -1.01
TREX1-202ENST00000444177 H3BRM9 83 aa8.76□□□□□ -1.01
TREX1-202ENST00000444177 MT1HL1P0DM35 61 aa8.76□□□□□ -1.01
TREX1-202ENST00000444177 C2orf82Q6UX34 121 aa8.76□□□□□ -1.01
TREX1-202ENST00000444177 Q8IZM0 81 aa8.76□□□□□ -1.01
TREX1-202ENST00000444177 PLA2G2DQ9UNK4 145 aa8.76□□□□□ -1.01
TREX1-202ENST00000444177 CHTOPQ9Y3Y2 248 aaKnown RBP8.76□□□□□ -1.01
TREX1-202ENST00000444177 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
TREX1-202ENST00000444177 SMIM1B2RUZ4 78 aa8.75□□□□□ -1.01
TREX1-202ENST00000444177 F8VRH5 84 aa8.75□□□□□ -1.01
TREX1-202ENST00000444177 A0A1W2PNN7 141 aa8.74□□□□□ -1.01
TREX1-202ENST00000444177 PRR3P79522 188 aaKnown RBP8.74□□□□□ -1.01
TREX1-202ENST00000444177 C9orf116Q5BN46 136 aaPredicted RBP8.74□□□□□ -1.01
TREX1-202ENST00000444177 Q6ZRP5 223 aa8.74□□□□□ -1.01
TREX1-202ENST00000444177 TRBV30A0A0K0K1B3 111 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 C11orf86A6NJI1 115 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 TLX1NBP0CAT3 122 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 FABP4P15090 132 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 ZNF22P17026 224 aaPredicted RBP8.73□□□□□ -1.01
TREX1-202ENST00000444177 CXCL5P42830 114 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 CKS1BP61024 79 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 ODF1Q14990 250 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 GAGE2EQ4V326 116 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 MAP1LC3CQ9BXW4 147 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 GAGE2DQ9UEU5 116 aa8.73□□□□□ -1.01
TREX1-202ENST00000444177 C6orf226Q5I0X4 101 aa8.72□□□□□ -1.01
TREX1-202ENST00000444177 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.02
TREX1-202ENST00000444177 PLNP26678 52 aa8.71□□□□□ -1.02
TREX1-202ENST00000444177 FAM168BA1KXE4 195 aa8.7□□□□□ -1.02
TREX1-202ENST00000444177 NDUFC2-KCTD14E9PQ53 114 aa8.7□□□□□ -1.02
TREX1-202ENST00000444177 SPINK8P0C7L1 97 aa8.7□□□□□ -1.02
TREX1-202ENST00000444177 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
TREX1-202ENST00000444177 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
TREX1-202ENST00000444177 FAM19A5Q7Z5A7 132 aaPredicted RBP8.7□□□□□ -1.02
TREX1-202ENST00000444177 COX7B2Q8TF08 81 aa8.7□□□□□ -1.02
TREX1-202ENST00000444177 TMEM223A0PJW6 202 aa8.68□□□□□ -1.02
TREX1-202ENST00000444177 H0Y8G0 127 aa8.68□□□□□ -1.02
TREX1-202ENST00000444177 SYS1-DBNDD2H3BUS1 97 aa8.68□□□□□ -1.02
TREX1-202ENST00000444177 S100A6P06703 90 aa8.68□□□□□ -1.02
TREX1-202ENST00000444177 SFTA2Q6UW10 78 aa8.68□□□□□ -1.02
TREX1-202ENST00000444177 DPM2O94777 84 aa8.67□□□□□ -1.02
TREX1-202ENST00000444177 PET117Q6UWS5 81 aa8.67□□□□□ -1.02
TREX1-202ENST00000444177 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
TREX1-202ENST00000444177 TNXBP22105 4242 aa8.66□□□□□ -1.02
TREX1-202ENST00000444177 M0QXV9 152 aa8.66□□□□□ -1.02
TREX1-202ENST00000444177 IGKCP01834 107 aa8.65□□□□□ -1.02
TREX1-202ENST00000444177 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
TREX1-202ENST00000444177 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
TREX1-202ENST00000444177 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.02
TREX1-202ENST00000444177 HIST3H2BBQ8N257 126 aa8.65□□□□□ -1.02
TREX1-202ENST00000444177 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.02
TREX1-202ENST00000444177 C3orf79P0CE67 100 aa8.64□□□□□ -1.03
TREX1-202ENST00000444177 AKR1D1P51857 326 aa8.64□□□□□ -1.03
TREX1-202ENST00000444177 SRSF9Q13242 221 aaKnown RBP eCLIP8.64□□□□□ -1.03
TREX1-202ENST00000444177 S100A2P29034 98 aa8.63□□□□□ -1.03
TREX1-202ENST00000444177 UBE2BP63146 152 aa8.63□□□□□ -1.03
TREX1-202ENST00000444177 C1orf137Q5JT78 98 aa8.63□□□□□ -1.03
TREX1-202ENST00000444177 XAGE1AQ9HD64 81 aa8.63□□□□□ -1.03
TREX1-202ENST00000444177 HERVK_113P61574 105 aa8.62□□□□□ -1.03
TREX1-202ENST00000444177 KRTAP7-1Q8IUC3 87 aa8.62□□□□□ -1.03
TREX1-202ENST00000444177 HIST1H2BLQ99880 126 aa8.62□□□□□ -1.03
TREX1-202ENST00000444177 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
TREX1-202ENST00000444177 C20orf202A1L168 122 aa8.61□□□□□ -1.03
TREX1-202ENST00000444177 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms