RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 IGLV5-37A0A075B6J1 123 aa8.21□□□□□ -1.1
HMGN1-208ENST00000443046 F8VRH5 84 aa8.21□□□□□ -1.1
HMGN1-208ENST00000443046 PPBPP02775 128 aa8.21□□□□□ -1.1
HMGN1-208ENST00000443046 RAB5AP20339 215 aa8.21□□□□□ -1.1
HMGN1-208ENST00000443046 ZC2HC1BQ5TFG8 222 aa8.21□□□□□ -1.1
HMGN1-208ENST00000443046 TCTE3Q8IZS6 198 aa8.21□□□□□ -1.1
HMGN1-208ENST00000443046 ALKBH7Q9BT30 221 aaPredicted RBP8.21□□□□□ -1.1
HMGN1-208ENST00000443046 IGKV2D-26A0A0A0MRZ7 120 aa8.2□□□□□ -1.1
HMGN1-208ENST00000443046 A0A1B0GXF2 115 aa8.2□□□□□ -1.1
HMGN1-208ENST00000443046 PRSS47A8MTI9 375 aa8.2□□□□□ -1.1
HMGN1-208ENST00000443046 RPL23P62829 140 aaKnown RBP8.2□□□□□ -1.1
HMGN1-208ENST00000443046 UBE2AP49459 152 aa8.19□□□□□ -1.1
HMGN1-208ENST00000443046 ALKAL2Q6UX46 152 aa8.19□□□□□ -1.1
HMGN1-208ENST00000443046 C2orf66Q6UXQ4 117 aa8.19□□□□□ -1.1
HMGN1-208ENST00000443046 C2orf88Q9BSF0 95 aa8.19□□□□□ -1.1
HMGN1-208ENST00000443046 GAGE10A6NGK3 116 aa8.18□□□□□ -1.1
HMGN1-208ENST00000443046 F8W036 122 aa8.18□□□□□ -1.1
HMGN1-208ENST00000443046 PNRC1Q12796 327 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-208ENST00000443046 KRTAP13-3Q3SY46 172 aa8.18□□□□□ -1.1
HMGN1-208ENST00000443046 FP248Q71RG6 208 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-208ENST00000443046 S100A8P05109 93 aa8.17□□□□□ -1.1
HMGN1-208ENST00000443046 NPSP0C0P6 89 aa8.17□□□□□ -1.1
HMGN1-208ENST00000443046 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
HMGN1-208ENST00000443046 VCX2Q9H322 139 aa8.17□□□□□ -1.1
HMGN1-208ENST00000443046 CDKN2A-AS1Q9UH64 79 aa8.17□□□□□ -1.1
HMGN1-208ENST00000443046 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
HMGN1-208ENST00000443046 CXCL5P42830 114 aa8.16□□□□□ -1.1
HMGN1-208ENST00000443046 MRPL54Q6P161 138 aaKnown RBP8.16□□□□□ -1.1
HMGN1-208ENST00000443046 TMEM136Q6ZRR5 245 aa8.16□□□□□ -1.1
HMGN1-208ENST00000443046 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
HMGN1-208ENST00000443046 LOC100996750A0A140TA64 210 aa8.14□□□□□ -1.11
HMGN1-208ENST00000443046 HERVK_113P63121 156 aa8.14□□□□□ -1.11
HMGN1-208ENST00000443046 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
HMGN1-208ENST00000443046 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
HMGN1-208ENST00000443046 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
HMGN1-208ENST00000443046 PLEKHB2Q96CS7 222 aa8.14□□□□□ -1.11
HMGN1-208ENST00000443046 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
HMGN1-208ENST00000443046 CYSLTR1Q9Y271 337 aa8.14□□□□□ -1.11
HMGN1-208ENST00000443046 SEC11AP67812 179 aa8.13□□□□□ -1.11
HMGN1-208ENST00000443046 ADIRFQ15847 76 aa8.13□□□□□ -1.11
HMGN1-208ENST00000443046 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
HMGN1-208ENST00000443046 LINC00337Q8N6G1 96 aa8.13□□□□□ -1.11
HMGN1-208ENST00000443046 PRLHP81277 87 aa8.12□□□□□ -1.11
HMGN1-208ENST00000443046 Q8N8P6 123 aa8.12□□□□□ -1.11
HMGN1-208ENST00000443046 NAT8Q9UHE5 227 aa8.12□□□□□ -1.11
HMGN1-208ENST00000443046 LAMTOR2Q9Y2Q5 125 aa8.12□□□□□ -1.11
HMGN1-208ENST00000443046 IGKV2-28A0A075B6P5 120 aa8.11□□□□□ -1.11
HMGN1-208ENST00000443046 LOC389332A0A1B0GUA5 103 aa8.11□□□□□ -1.11
HMGN1-208ENST00000443046 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
HMGN1-208ENST00000443046 SCO1O75880 301 aa8.11□□□□□ -1.11
HMGN1-208ENST00000443046 IGKV2D-28P01615 120 aa8.11□□□□□ -1.11
HMGN1-208ENST00000443046 NKAPP1Q8N9T2 125 aa8.11□□□□□ -1.11
HMGN1-208ENST00000443046 C9JQL5 133 aa8.1□□□□□ -1.11
HMGN1-208ENST00000443046 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
HMGN1-208ENST00000443046 TMEM126AQ9H061 195 aa8.1□□□□□ -1.11
HMGN1-208ENST00000443046 ORMDL2Q53FV1 153 aa8.09□□□□□ -1.11
HMGN1-208ENST00000443046 PDZD11Q5EBL8 140 aa8.09□□□□□ -1.11
HMGN1-208ENST00000443046 ATP5L2Q7Z4Y8 100 aa8.09□□□□□ -1.11
HMGN1-208ENST00000443046 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
HMGN1-208ENST00000443046 COX7B2Q8TF08 81 aa8.09□□□□□ -1.11
HMGN1-208ENST00000443046 MAP1LC3AQ9H492 121 aa8.09□□□□□ -1.11
HMGN1-208ENST00000443046 GEMIN7Q9H840 131 aaKnown RBP8.09□□□□□ -1.11
HMGN1-208ENST00000443046 K7EMI3 77 aa8.08□□□□□ -1.12
HMGN1-208ENST00000443046 M0R378 163 aa8.08□□□□□ -1.12
HMGN1-208ENST00000443046 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
HMGN1-208ENST00000443046 TMEM238C9JI98 176 aa8.07□□□□□ -1.12
HMGN1-208ENST00000443046 LCE2BO14633 110 aa8.07□□□□□ -1.12
HMGN1-208ENST00000443046 RAB5BP61020 215 aa8.07□□□□□ -1.12
HMGN1-208ENST00000443046 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
HMGN1-208ENST00000443046 TIMM17AQ99595 171 aa8.07□□□□□ -1.12
HMGN1-208ENST00000443046 GNB1LQ9BYB4 327 aa8.07□□□□□ -1.12
HMGN1-208ENST00000443046 VPREB1P12018 145 aa8.06□□□□□ -1.12
HMGN1-208ENST00000443046 KRTAP19-2Q3LHN2 52 aa8.06□□□□□ -1.12
HMGN1-208ENST00000443046 CBLN2Q8IUK8 224 aa8.05□□□□□ -1.12
HMGN1-208ENST00000443046 TINCRA0A1B0GVN0 87 aa8.04□□□□□ -1.12
HMGN1-208ENST00000443046 TOMM6Q96B49 74 aa8.04□□□□□ -1.12
HMGN1-208ENST00000443046 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
HMGN1-208ENST00000443046 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
HMGN1-208ENST00000443046 MT1HP80294 61 aa8.02□□□□□ -1.13
HMGN1-208ENST00000443046 XP32Q5T750 250 aa8.02□□□□□ -1.13
HMGN1-208ENST00000443046 Q8NBF4 154 aa8.02□□□□□ -1.13
HMGN1-208ENST00000443046 SPINK1P00995 79 aa8.01□□□□□ -1.13
HMGN1-208ENST00000443046 G0S2P27469 103 aa8.01□□□□□ -1.13
HMGN1-208ENST00000443046 ERASQ7Z444 233 aa8.01□□□□□ -1.13
HMGN1-208ENST00000443046 DAND5Q8N907 189 aa8.01□□□□□ -1.13
HMGN1-208ENST00000443046 Q8NDZ9 215 aa8.01□□□□□ -1.13
HMGN1-208ENST00000443046 NXT2Q9NPJ8 142 aaKnown RBP8.01□□□□□ -1.13
HMGN1-208ENST00000443046 SPINK8P0C7L1 97 aa8□□□□□ -1.13
HMGN1-208ENST00000443046 HIGD2AQ9BW72 106 aa8□□□□□ -1.13
HMGN1-208ENST00000443046 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
HMGN1-208ENST00000443046 ATP5LO75964 103 aa7.99□□□□□ -1.13
HMGN1-208ENST00000443046 ADCYAP1P18509 176 aa7.99□□□□□ -1.13
HMGN1-208ENST00000443046 PFN2P35080 140 aa7.99□□□□□ -1.13
HMGN1-208ENST00000443046 LORP23490 312 aaPredicted RBP7.98□□□□□ -1.13
HMGN1-208ENST00000443046 RPL24P83731 157 aaKnown RBP7.98□□□□□ -1.13
HMGN1-208ENST00000443046 PEA15Q15121 130 aa7.98□□□□□ -1.13
HMGN1-208ENST00000443046 CFC1BP0CG36 223 aa7.97□□□□□ -1.13
HMGN1-208ENST00000443046 AKAP14Q86UN6 197 aa7.97□□□□□ -1.13
HMGN1-208ENST00000443046 SCGB3A1Q96QR1 104 aa7.97□□□□□ -1.13
HMGN1-208ENST00000443046 CST9LQ9H4G1 147 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms