RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 ORMDL3Q8N138 153 aa8.08□□□□□ -1.12
LINC00642-202ENST00000442515 HIST3H2BBQ8N257 126 aa8.08□□□□□ -1.12
LINC00642-202ENST00000442515 C18orf32Q8TCD1 76 aa8.08□□□□□ -1.12
LINC00642-202ENST00000442515 ST20Q9HBF5 79 aa8.08□□□□□ -1.12
LINC00642-202ENST00000442515 RAB4AP20338 218 aa8.07□□□□□ -1.12
LINC00642-202ENST00000442515 MRPL51Q4U2R6 128 aaKnown RBP8.07□□□□□ -1.12
LINC00642-202ENST00000442515 LINC00173Q6ZV60 143 aa8.07□□□□□ -1.12
LINC00642-202ENST00000442515 BAGE3Q86Y29 109 aa8.07□□□□□ -1.12
LINC00642-202ENST00000442515 UBE2D4Q9Y2X8 147 aa8.07□□□□□ -1.12
LINC00642-202ENST00000442515 CSDC2Q9Y534 153 aaKnown RBP8.07□□□□□ -1.12
LINC00642-202ENST00000442515 D6R8Y8 96 aa8.06□□□□□ -1.12
LINC00642-202ENST00000442515 NUPR1O60356 82 aa8.06□□□□□ -1.12
LINC00642-202ENST00000442515 S100A2P29034 98 aa8.06□□□□□ -1.12
LINC00642-202ENST00000442515 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
LINC00642-202ENST00000442515 Q6ZUT4 128 aa8.06□□□□□ -1.12
LINC00642-202ENST00000442515 PRELID3AQ96N28 172 aa8.06□□□□□ -1.12
LINC00642-202ENST00000442515 TRBV27A0A0K0K1C4 114 aa8.05□□□□□ -1.12
LINC00642-202ENST00000442515 SERF1AO75920 110 aa8.05□□□□□ -1.12
LINC00642-202ENST00000442515 CKS2P33552 79 aa8.05□□□□□ -1.12
LINC00642-202ENST00000442515 POLR2KP53803 58 aaKnown RBP8.05□□□□□ -1.12
LINC00642-202ENST00000442515 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
LINC00642-202ENST00000442515 LINC00304Q8N9R0 145 aa8.05□□□□□ -1.12
LINC00642-202ENST00000442515 PACRGQ96M98 296 aaPredicted RBP8.05□□□□□ -1.12
LINC00642-202ENST00000442515 ANAPC11Q9NYG5 84 aa8.05□□□□□ -1.12
LINC00642-202ENST00000442515 LINC00310P59036 64 aa8.04□□□□□ -1.12
LINC00642-202ENST00000442515 TMEM18Q96B42 140 aa8.04□□□□□ -1.12
LINC00642-202ENST00000442515 CHCHD1Q96BP2 118 aaKnown RBP8.04□□□□□ -1.12
LINC00642-202ENST00000442515 IFITM10A6NMD0 228 aa8.03□□□□□ -1.12
LINC00642-202ENST00000442515 PPP1R17O96001 155 aa8.03□□□□□ -1.12
LINC00642-202ENST00000442515 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
LINC00642-202ENST00000442515 HIST1H2BLQ99880 126 aa8.03□□□□□ -1.12
LINC00642-202ENST00000442515 PPDPFQ9H3Y8 114 aa8.03□□□□□ -1.12
LINC00642-202ENST00000442515 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
LINC00642-202ENST00000442515 PRSS47A8MTI9 375 aa8.02□□□□□ -1.13
LINC00642-202ENST00000442515 NDUFC2-KCTD14E9PQ53 114 aa8.02□□□□□ -1.13
LINC00642-202ENST00000442515 NPYP01303 97 aa8.02□□□□□ -1.13
LINC00642-202ENST00000442515 FCER1GP30273 86 aa8.02□□□□□ -1.13
LINC00642-202ENST00000442515 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
LINC00642-202ENST00000442515 KRTAP4-1Q9BYQ7 146 aa8.02□□□□□ -1.13
LINC00642-202ENST00000442515 MAP1LC3AQ9H492 121 aa8.02□□□□□ -1.13
LINC00642-202ENST00000442515 HSBP1O75506 76 aa8.01□□□□□ -1.13
LINC00642-202ENST00000442515 TNFRSF6BO95407 300 aa8.01□□□□□ -1.13
LINC00642-202ENST00000442515 LINC00614P0C842 121 aa8.01□□□□□ -1.13
LINC00642-202ENST00000442515 FABP4P15090 132 aa8.01□□□□□ -1.13
LINC00642-202ENST00000442515 PDZD11Q5EBL8 140 aa8.01□□□□□ -1.13
LINC00642-202ENST00000442515 NRACQ8N912 160 aa8.01□□□□□ -1.13
LINC00642-202ENST00000442515 LINC01546A6NGU7 62 aa8□□□□□ -1.13
LINC00642-202ENST00000442515 SMKR1H3BMG3 65 aa8□□□□□ -1.13
LINC00642-202ENST00000442515 AKR1D1P51857 326 aa8□□□□□ -1.13
LINC00642-202ENST00000442515 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
LINC00642-202ENST00000442515 URB1-AS1Q96HZ7 61 aa8□□□□□ -1.13
LINC00642-202ENST00000442515 C20orf78Q9BR46 151 aa8□□□□□ -1.13
LINC00642-202ENST00000442515 NXT2Q9NPJ8 142 aaKnown RBP8□□□□□ -1.13
LINC00642-202ENST00000442515 C22orf24Q9Y442 160 aa8□□□□□ -1.13
LINC00642-202ENST00000442515 TRBV30A0A0K0K1B3 111 aa7.99□□□□□ -1.13
LINC00642-202ENST00000442515 BCE1O60756 84 aa7.99□□□□□ -1.13
LINC00642-202ENST00000442515 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
LINC00642-202ENST00000442515 FA2HQ7L5A8 372 aa7.99□□□□□ -1.13
LINC00642-202ENST00000442515 K7EMI3 77 aa7.98□□□□□ -1.13
LINC00642-202ENST00000442515 VCYO14598 125 aa7.98□□□□□ -1.13
LINC00642-202ENST00000442515 SMIM6P0DI80 62 aa7.98□□□□□ -1.13
LINC00642-202ENST00000442515 RPL32P62910 135 aaKnown RBP7.98□□□□□ -1.13
LINC00642-202ENST00000442515 LINC00242Q5T6M2 205 aa7.98□□□□□ -1.13
LINC00642-202ENST00000442515 C2orf82Q6UX34 121 aa7.98□□□□□ -1.13
LINC00642-202ENST00000442515 Q8N8P6 123 aa7.98□□□□□ -1.13
LINC00642-202ENST00000442515 TIMM21Q9BVV7 248 aa7.98□□□□□ -1.13
LINC00642-202ENST00000442515 IFI27P40305 119 aaPredicted RBP7.97□□□□□ -1.13
LINC00642-202ENST00000442515 SUMO2P61956 95 aaKnown RBP7.97□□□□□ -1.13
LINC00642-202ENST00000442515 LBHQ53QV2 105 aaPredicted RBP7.97□□□□□ -1.13
LINC00642-202ENST00000442515 SMIM2Q9BVW6 85 aa7.97□□□□□ -1.13
LINC00642-202ENST00000442515 LOC389332A0A1B0GUA5 103 aa7.96□□□□□ -1.14
LINC00642-202ENST00000442515 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
LINC00642-202ENST00000442515 FAM104AQ969W3 186 aa7.96□□□□□ -1.14
LINC00642-202ENST00000442515 LINC00469Q8N7U9 141 aa7.95□□□□□ -1.14
LINC00642-202ENST00000442515 KIR2DL4Q99706 377 aa7.95□□□□□ -1.14
LINC00642-202ENST00000442515 HBDP02042 147 aa7.94□□□□□ -1.14
LINC00642-202ENST00000442515 CTAG1AP78358 180 aa7.94□□□□□ -1.14
LINC00642-202ENST00000442515 FAM19A2Q8N3H0 131 aa7.94□□□□□ -1.14
LINC00642-202ENST00000442515 LINC00337Q8N6G1 96 aa7.94□□□□□ -1.14
LINC00642-202ENST00000442515 IGKV2D-26A0A0A0MRZ7 120 aa7.93□□□□□ -1.14
LINC00642-202ENST00000442515 TCAPO15273 167 aa7.93□□□□□ -1.14
LINC00642-202ENST00000442515 RPL39P62891 51 aaKnown RBP7.93□□□□□ -1.14
LINC00642-202ENST00000442515 JOSD1Q15040 202 aaPredicted RBP7.93□□□□□ -1.14
LINC00642-202ENST00000442515 KRTAP13-3Q3SY46 172 aa7.93□□□□□ -1.14
LINC00642-202ENST00000442515 LCE2CQ5TA81 110 aa7.93□□□□□ -1.14
LINC00642-202ENST00000442515 MRPL55Q7Z7F7 128 aaKnown RBP7.93□□□□□ -1.14
LINC00642-202ENST00000442515 XAGE1AQ9HD64 81 aa7.93□□□□□ -1.14
LINC00642-202ENST00000442515 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
LINC00642-202ENST00000442515 LINC01549A6NIU2 74 aa7.92□□□□□ -1.14
LINC00642-202ENST00000442515 LEPROTL1O95214 131 aa7.92□□□□□ -1.14
LINC00642-202ENST00000442515 ORMDL2Q53FV1 153 aa7.92□□□□□ -1.14
LINC00642-202ENST00000442515 LINC00518Q8N0U6 118 aa7.92□□□□□ -1.14
LINC00642-202ENST00000442515 TP73-AS1Q9UF72 201 aa7.92□□□□□ -1.14
LINC00642-202ENST00000442515 A0A096LNJ9 63 aa7.91□□□□□ -1.14
LINC00642-202ENST00000442515 G0S2P27469 103 aa7.91□□□□□ -1.14
LINC00642-202ENST00000442515 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
LINC00642-202ENST00000442515 PMCHL1Q16048 86 aa7.91□□□□□ -1.14
LINC00642-202ENST00000442515 PYY3Q5JQD4 70 aa7.91□□□□□ -1.14
LINC00642-202ENST00000442515 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
LINC00642-202ENST00000442515 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms