RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 C7orf33Q8WU49 177 aa9.98□□□□□ -0.81
TRAPPC12-209ENST00000441099 TRBV30A0A0K0K1B3 111 aa9.97□□□□□ -0.81
TRAPPC12-209ENST00000441099 C6orf226Q5I0X4 101 aa9.97□□□□□ -0.81
TRAPPC12-209ENST00000441099 Q6ZRP5 223 aa9.97□□□□□ -0.81
TRAPPC12-209ENST00000441099 PACRGQ96M98 296 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-209ENST00000441099 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
TRAPPC12-209ENST00000441099 LRP1Q07954 4544 aaKnown RBP9.96□□□□□ -0.81
TRAPPC12-209ENST00000441099 SMIM1B2RUZ4 78 aa9.96□□□□□ -0.82
TRAPPC12-209ENST00000441099 PRSS2P07478 247 aa9.96□□□□□ -0.82
TRAPPC12-209ENST00000441099 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC12-209ENST00000441099 TRGC2P03986 189 aa9.95□□□□□ -0.82
TRAPPC12-209ENST00000441099 CHCHD1Q96BP2 118 aaKnown RBP9.95□□□□□ -0.82
TRAPPC12-209ENST00000441099 COLCA2A8K830 154 aa9.94□□□□□ -0.82
TRAPPC12-209ENST00000441099 ATP5LO75964 103 aa9.94□□□□□ -0.82
TRAPPC12-209ENST00000441099 IGLC3P0DOY3 106 aa9.94□□□□□ -0.82
TRAPPC12-209ENST00000441099 CKS1BP61024 79 aa9.94□□□□□ -0.82
TRAPPC12-209ENST00000441099 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-209ENST00000441099 NDUFA6P56556 154 aa9.93□□□□□ -0.82
TRAPPC12-209ENST00000441099 NDUFC2-KCTD14E9PQ53 114 aa9.92□□□□□ -0.82
TRAPPC12-209ENST00000441099 SPINK8P0C7L1 97 aa9.92□□□□□ -0.82
TRAPPC12-209ENST00000441099 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
TRAPPC12-209ENST00000441099 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
TRAPPC12-209ENST00000441099 F8VRH5 84 aa9.91□□□□□ -0.82
TRAPPC12-209ENST00000441099 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-209ENST00000441099 FAM168BA1KXE4 195 aa9.9□□□□□ -0.82
TRAPPC12-209ENST00000441099 H3BRM9 83 aa9.9□□□□□ -0.82
TRAPPC12-209ENST00000441099 ZNF22P17026 224 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC12-209ENST00000441099 CXCL5P42830 114 aa9.9□□□□□ -0.82
TRAPPC12-209ENST00000441099 BAGE3Q86Y29 109 aa9.9□□□□□ -0.82
TRAPPC12-209ENST00000441099 COX7B2Q8TF08 81 aa9.9□□□□□ -0.82
TRAPPC12-209ENST00000441099 DMBT1Q9UGM3 2413 aaPredicted RBP9.9□□□□□ -0.83
TRAPPC12-209ENST00000441099 IGLV5-39A0A0G2JS06 123 aa9.89□□□□□ -0.83
TRAPPC12-209ENST00000441099 LINC00310P59036 64 aa9.89□□□□□ -0.83
TRAPPC12-209ENST00000441099 OXTP01178 125 aa9.88□□□□□ -0.83
TRAPPC12-209ENST00000441099 C9orf129Q5T035 196 aaKnown RBP9.88□□□□□ -0.83
TRAPPC12-209ENST00000441099 PHF5AQ7RTV0 110 aaKnown RBP9.88□□□□□ -0.83
TRAPPC12-209ENST00000441099 KRTAP7-1Q8IUC3 87 aa9.88□□□□□ -0.83
TRAPPC12-209ENST00000441099 FAM19A2Q8N3H0 131 aa9.88□□□□□ -0.83
TRAPPC12-209ENST00000441099 C11orf86A6NJI1 115 aa9.87□□□□□ -0.83
TRAPPC12-209ENST00000441099 J3QL48 77 aa9.87□□□□□ -0.83
TRAPPC12-209ENST00000441099 HSBP1O75506 76 aa9.87□□□□□ -0.83
TRAPPC12-209ENST00000441099 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
TRAPPC12-209ENST00000441099 TRAV12-1A0A0B4J245 112 aa9.86□□□□□ -0.83
TRAPPC12-209ENST00000441099 SCO1O75880 301 aa9.86□□□□□ -0.83
TRAPPC12-209ENST00000441099 FAM19A5Q7Z5A7 132 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-209ENST00000441099 CHTOPQ9Y3Y2 248 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-209ENST00000441099 SERF1AO75920 110 aa9.85□□□□□ -0.83
TRAPPC12-209ENST00000441099 NUPR1O60356 82 aa9.84□□□□□ -0.83
TRAPPC12-209ENST00000441099 PSORS1C2Q9UIG4 136 aa9.84□□□□□ -0.83
TRAPPC12-209ENST00000441099 SRSF9Q13242 221 aaKnown RBP eCLIP9.83□□□□□ -0.845e-8■■■■□ 26
TRAPPC12-209ENST00000441099 TMEM170BQ5T4T1 132 aa9.83□□□□□ -0.84
TRAPPC12-209ENST00000441099 KRTAP11-1Q8IUC1 163 aa9.83□□□□□ -0.84
TRAPPC12-209ENST00000441099 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
TRAPPC12-209ENST00000441099 M0QXV9 152 aa9.81□□□□□ -0.84
TRAPPC12-209ENST00000441099 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
TRAPPC12-209ENST00000441099 TNXBP22105 4242 aa9.8□□□□□ -0.84
TRAPPC12-209ENST00000441099 LEPROTL1O95214 131 aa9.8□□□□□ -0.84
TRAPPC12-209ENST00000441099 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
TRAPPC12-209ENST00000441099 TMEM223A0PJW6 202 aa9.79□□□□□ -0.84
TRAPPC12-209ENST00000441099 ODF1Q14990 250 aa9.79□□□□□ -0.84
TRAPPC12-209ENST00000441099 C1orf137Q5JT78 98 aa9.78□□□□□ -0.84
TRAPPC12-209ENST00000441099 C22orf24Q9Y442 160 aa9.78□□□□□ -0.84
TRAPPC12-209ENST00000441099 HIST1H2BKO60814 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST1H2BJP06899 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 MT1HL1P0DM35 61 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST1H2BOP23527 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST1H2BBP33778 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST1H2BDP58876 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST1H2BCP62807 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST2H2BEQ16778 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST1H2BHQ93079 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 ZNF625Q96I27 306 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST1H2BNQ99877 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 HIST1H2BMQ99879 126 aa9.77□□□□□ -0.85
TRAPPC12-209ENST00000441099 H0Y8G0 127 aa9.76□□□□□ -0.85
TRAPPC12-209ENST00000441099 FABP4P15090 132 aa9.76□□□□□ -0.85
TRAPPC12-209ENST00000441099 HSPB8Q9UJY1 196 aa9.76□□□□□ -0.85
TRAPPC12-209ENST00000441099 PFN2P35080 140 aa9.75□□□□□ -0.85
TRAPPC12-209ENST00000441099 UBE2BP63146 152 aa9.75□□□□□ -0.85
TRAPPC12-209ENST00000441099 ERG28Q9UKR5 140 aa9.75□□□□□ -0.85
TRAPPC12-209ENST00000441099 PLA2G2DQ9UNK4 145 aa9.75□□□□□ -0.85
TRAPPC12-209ENST00000441099 IGLV7-43P04211 117 aa9.74□□□□□ -0.85
TRAPPC12-209ENST00000441099 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
TRAPPC12-209ENST00000441099 TP73-AS1Q9UF72 201 aa9.74□□□□□ -0.85
TRAPPC12-209ENST00000441099 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
TRAPPC12-209ENST00000441099 COX17Q14061 63 aa9.73□□□□□ -0.85
TRAPPC12-209ENST00000441099 LBHQ53QV2 105 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-209ENST00000441099 LINC01600Q96MT4 127 aa9.73□□□□□ -0.85
TRAPPC12-209ENST00000441099 IGLV5-37A0A075B6J1 123 aa9.72□□□□□ -0.85
TRAPPC12-209ENST00000441099 MRPL55Q7Z7F7 128 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-209ENST00000441099 REG3GQ6UW15 175 aa9.71□□□□□ -0.86
TRAPPC12-209ENST00000441099 SND1-IT1Q9HBX3 110 aa9.71□□□□□ -0.86
TRAPPC12-209ENST00000441099 PLNP26678 52 aa9.7□□□□□ -0.86
TRAPPC12-209ENST00000441099 PMCHL2Q9BQD1 86 aa9.7□□□□□ -0.86
TRAPPC12-209ENST00000441099 DPM2O94777 84 aa9.69□□□□□ -0.86
TRAPPC12-209ENST00000441099 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
TRAPPC12-209ENST00000441099 MAP1LC3CQ9BXW4 147 aa9.69□□□□□ -0.86
TRAPPC12-209ENST00000441099 IGKCP01834 107 aa9.67□□□□□ -0.86
TRAPPC12-209ENST00000441099 VPREB1P12018 145 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms