RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 CKS1BP61024 79 aa10.36□□□□□ -0.75
TOM1-207ENST00000439512 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
TOM1-207ENST00000439512 TRBV30A0A0K0K1B3 111 aa10.35□□□□□ -0.75
TOM1-207ENST00000439512 ATP5LO75964 103 aa10.35□□□□□ -0.75
TOM1-207ENST00000439512 Q8IZM0 81 aa10.35□□□□□ -0.75
TOM1-207ENST00000439512 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
TOM1-207ENST00000439512 TLX1NBP0CAT3 122 aa10.34□□□□□ -0.75
TOM1-207ENST00000439512 GAGE2EQ4V326 116 aa10.34□□□□□ -0.75
TOM1-207ENST00000439512 C9orf116Q5BN46 136 aaPredicted RBP10.34□□□□□ -0.75
TOM1-207ENST00000439512 Q6ZRP5 223 aa10.34□□□□□ -0.75
TOM1-207ENST00000439512 BAGE3Q86Y29 109 aa10.34□□□□□ -0.75
TOM1-207ENST00000439512 GAGE2DQ9UEU5 116 aa10.34□□□□□ -0.75
TOM1-207ENST00000439512 FAT3Q8TDW7 4589 aa10.34□□□□□ -0.75
TOM1-207ENST00000439512 LRP1Q07954 4544 aaKnown RBP10.34□□□□□ -0.75
TOM1-207ENST00000439512 HERC1Q15751 4861 aa10.33□□□□□ -0.76
TOM1-207ENST00000439512 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
TOM1-207ENST00000439512 COLCA2A8K830 154 aa10.33□□□□□ -0.76
TOM1-207ENST00000439512 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
TOM1-207ENST00000439512 HNRNPA3P51991 378 aaKnown RBP10.33□□□□□ -0.76
TOM1-207ENST00000439512 SPINK8P0C7L1 97 aa10.32□□□□□ -0.76
TOM1-207ENST00000439512 H3BRM9 83 aa10.31□□□□□ -0.76
TOM1-207ENST00000439512 IGLC3P0DOY3 106 aa10.31□□□□□ -0.76
TOM1-207ENST00000439512 COX7B2Q8TF08 81 aa10.31□□□□□ -0.76
TOM1-207ENST00000439512 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
TOM1-207ENST00000439512 HSBP1O75506 76 aa10.3□□□□□ -0.76
TOM1-207ENST00000439512 FAM19A2Q8N3H0 131 aa10.3□□□□□ -0.76
TOM1-207ENST00000439512 F8VRH5 84 aa10.29□□□□□ -0.76
TOM1-207ENST00000439512 DMBT1Q9UGM3 2413 aaPredicted RBP10.28□□□□□ -0.76
TOM1-207ENST00000439512 FAM168BA1KXE4 195 aa10.28□□□□□ -0.76
TOM1-207ENST00000439512 J3QL48 77 aa10.28□□□□□ -0.76
TOM1-207ENST00000439512 SCO1O75880 301 aa10.28□□□□□ -0.76
TOM1-207ENST00000439512 CXCL5P42830 114 aa10.28□□□□□ -0.76
TOM1-207ENST00000439512 IFI27L1Q96BM0 104 aa10.28□□□□□ -0.76
TOM1-207ENST00000439512 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
TOM1-207ENST00000439512 PRR3P79522 188 aaKnown RBP10.27□□□□□ -0.77
TOM1-207ENST00000439512 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
TOM1-207ENST00000439512 CHTOPQ9Y3Y2 248 aaKnown RBP10.27□□□□□ -0.77
TOM1-207ENST00000439512 C11orf86A6NJI1 115 aa10.26□□□□□ -0.77
TOM1-207ENST00000439512 KRTAP29-1A8MX34 341 aaPredicted RBP10.26□□□□□ -0.77
TOM1-207ENST00000439512 SERF1AO75920 110 aa10.26□□□□□ -0.77
TOM1-207ENST00000439512 FAM19A5Q7Z5A7 132 aaPredicted RBP10.26□□□□□ -0.77
TOM1-207ENST00000439512 C9orf129Q5T035 196 aaKnown RBP10.25□□□□□ -0.77
TOM1-207ENST00000439512 TMEM170BQ5T4T1 132 aa10.25□□□□□ -0.77
TOM1-207ENST00000439512 LINC00310P59036 64 aa10.24□□□□□ -0.77
TOM1-207ENST00000439512 TRAV12-1A0A0B4J245 112 aa10.23□□□□□ -0.77
TOM1-207ENST00000439512 IGLV5-39A0A0G2JS06 123 aa10.23□□□□□ -0.77
TOM1-207ENST00000439512 NUPR1O60356 82 aa10.23□□□□□ -0.77
TOM1-207ENST00000439512 OXTP01178 125 aa10.23□□□□□ -0.77
TOM1-207ENST00000439512 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
TOM1-207ENST00000439512 XAGE1AQ9HD64 81 aa10.23□□□□□ -0.77
TOM1-207ENST00000439512 LEPROTL1O95214 131 aa10.21□□□□□ -0.77
TOM1-207ENST00000439512 PSORS1C2Q9UIG4 136 aa10.21□□□□□ -0.77
TOM1-207ENST00000439512 H0Y8G0 127 aa10.2□□□□□ -0.78
TOM1-207ENST00000439512 FABP4P15090 132 aa10.2□□□□□ -0.78
TOM1-207ENST00000439512 M0QXV9 152 aa10.19□□□□□ -0.78
TOM1-207ENST00000439512 C1orf137Q5JT78 98 aa10.18□□□□□ -0.78
TOM1-207ENST00000439512 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
TOM1-207ENST00000439512 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
TOM1-207ENST00000439512 PFN2P35080 140 aa10.17□□□□□ -0.78
TOM1-207ENST00000439512 UBE2BP63146 152 aa10.17□□□□□ -0.78
TOM1-207ENST00000439512 SRSF9Q13242 221 aaKnown RBP eCLIP10.17□□□□□ -0.78
TOM1-207ENST00000439512 ZNF625Q96I27 306 aaPredicted RBP10.17□□□□□ -0.78
TOM1-207ENST00000439512 HSPB8Q9UJY1 196 aa10.17□□□□□ -0.78
TOM1-207ENST00000439512 TMEM223A0PJW6 202 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST1H2BKO60814 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST1H2BJP06899 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST1H2BOP23527 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST1H2BBP33778 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST1H2BDP58876 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST1H2BCP62807 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST2H2BEQ16778 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.16□□□□□ -0.78
TOM1-207ENST00000439512 SPINK6Q6UWN8 80 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST1H2BHQ93079 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST1H2BNQ99877 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 HIST1H2BMQ99879 126 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 C22orf24Q9Y442 160 aa10.16□□□□□ -0.78
TOM1-207ENST00000439512 ODF1Q14990 250 aa10.15□□□□□ -0.78
TOM1-207ENST00000439512 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
TOM1-207ENST00000439512 LBHQ53QV2 105 aaPredicted RBP10.13□□□□□ -0.79
TOM1-207ENST00000439512 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
TOM1-207ENST00000439512 TNXBP22105 4242 aa10.11□□□□□ -0.79
TOM1-207ENST00000439512 IGLV7-43P04211 117 aa10.11□□□□□ -0.79
TOM1-207ENST00000439512 MT1HL1P0DM35 61 aa10.11□□□□□ -0.79
TOM1-207ENST00000439512 COX17Q14061 63 aa10.11□□□□□ -0.79
TOM1-207ENST00000439512 MRPL55Q7Z7F7 128 aaKnown RBP10.1□□□□□ -0.79
TOM1-207ENST00000439512 PMCHL2Q9BQD1 86 aa10.1□□□□□ -0.79
TOM1-207ENST00000439512 MAP1LC3CQ9BXW4 147 aa10.1□□□□□ -0.79
TOM1-207ENST00000439512 PLA2G2DQ9UNK4 145 aa10.1□□□□□ -0.79
TOM1-207ENST00000439512 PLNP26678 52 aa10.09□□□□□ -0.79
TOM1-207ENST00000439512 LINC00158P58513 81 aa10.09□□□□□ -0.79
TOM1-207ENST00000439512 REG3GQ6UW15 175 aa10.09□□□□□ -0.79
TOM1-207ENST00000439512 SND1-IT1Q9HBX3 110 aa10.09□□□□□ -0.79
TOM1-207ENST00000439512 TP73-AS1Q9UF72 201 aa10.09□□□□□ -0.79
TOM1-207ENST00000439512 A0A0U1RRA0 63 aa10.08□□□□□ -0.8
TOM1-207ENST00000439512 DPM2O94777 84 aa10.08□□□□□ -0.8
TOM1-207ENST00000439512 LINC00167Q96N53 147 aa10.08□□□□□ -0.8
TOM1-207ENST00000439512 GAGE10A6NGK3 116 aa10.07□□□□□ -0.8
TOM1-207ENST00000439512 RPL37AP8A6NKH3 93 aa10.07□□□□□ -0.8
TOM1-207ENST00000439512 NKAPP1Q8N9T2 125 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms