RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CHCHD7Q9BUK0 85 aa4.66□□□□□ -1.66
BDNF-211ENST00000439476 PCSK5Q92824 1860 aa4.66□□□□□ -1.66
BDNF-211ENST00000439476 LINC01546A6NGU7 62 aa4.66□□□□□ -1.66
BDNF-211ENST00000439476 HILS1P60008 231 aa4.66□□□□□ -1.66
BDNF-211ENST00000439476 Q6JHZ5 121 aa4.66□□□□□ -1.66
BDNF-211ENST00000439476 DMXL1Q9Y485 3027 aa4.66□□□□□ -1.66
BDNF-211ENST00000439476 TRAV23DV6A0A075B6W5 121 aa4.65□□□□□ -1.66
BDNF-211ENST00000439476 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.65□□□□□ -1.66
BDNF-211ENST00000439476 ABCA12Q86UK0 2595 aa4.65□□□□□ -1.66
BDNF-211ENST00000439476 LINC00269Q8N2A0 174 aa4.65□□□□□ -1.66
BDNF-211ENST00000439476 FASNP49327 2511 aaKnown RBP4.65□□□□□ -1.67
BDNF-211ENST00000439476 M0R378 163 aa4.65□□□□□ -1.67
BDNF-211ENST00000439476 PROK1P58294 105 aa4.65□□□□□ -1.67
BDNF-211ENST00000439476 USP17L23D6RBM5 183 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 FP248Q71RG6 208 aaPredicted RBP4.64□□□□□ -1.67
BDNF-211ENST00000439476 PRR15LQ9BU68 103 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 A0A087WVE0 104 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 TRBV7-6A0A0J9YX20 115 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 H0Y9J4 135 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 FAM19A3Q7Z5A8 133 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 Q8IZM0 81 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 ZNF706Q9Y5V0 76 aaPredicted RBP4.64□□□□□ -1.67
BDNF-211ENST00000439476 ANKRD11Q6UB99 2663 aaPredicted RBP4.64□□□□□ -1.67
BDNF-211ENST00000439476 HIVEP2P31629 2446 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 IGLV1-40P01703 118 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 IGHV4-31P0DP07 118 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 SYCNQ0VAF6 134 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 PRR26Q8N8Z3 221 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 MDFIQ99750 246 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 UBE2D4Q9Y2X8 147 aa4.64□□□□□ -1.67
BDNF-211ENST00000439476 LELP1Q5T871 98 aa4.63□□□□□ -1.67
BDNF-211ENST00000439476 SPTSSBQ8NFR3 76 aa4.63□□□□□ -1.67
BDNF-211ENST00000439476 C6orf99Q4VX62 202 aa4.63□□□□□ -1.67
BDNF-211ENST00000439476 K7ERS5 55 aa4.63□□□□□ -1.67
BDNF-211ENST00000439476 C16orf95Q9H693 158 aa4.62□□□□□ -1.67
BDNF-211ENST00000439476 PRRC2AP48634 2157 aaKnown RBP4.62□□□□□ -1.67
BDNF-211ENST00000439476 ENHOQ6UWT2 76 aa4.62□□□□□ -1.67
BDNF-211ENST00000439476 USP9YO00507 2555 aaPredicted RBP4.62□□□□□ -1.67
BDNF-211ENST00000439476 USP9XQ93008 2570 aaPredicted RBP4.62□□□□□ -1.67
BDNF-211ENST00000439476 CCKP06307 115 aa4.62□□□□□ -1.67
BDNF-211ENST00000439476 C10orf99Q6UWK7 81 aa4.62□□□□□ -1.67
BDNF-211ENST00000439476 PRR15Q8IV56 129 aa4.62□□□□□ -1.67
BDNF-211ENST00000439476 ABCA2Q9BZC7 2435 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 NAV2Q8IVL1 2488 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 VPS13CQ709C8 3753 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 A0A087WZ39 114 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 TRAV10A0A0B4J240 114 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 IGKV4-1P06312 121 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 RPL28P46779 137 aaKnown RBP4.61□□□□□ -1.67
BDNF-211ENST00000439476 SNURFQ9Y675 71 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 LINC00959A0A1B0GUT2 108 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 Q6ZSV7 163 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 HIVEP3Q5T1R4 2406 aa4.61□□□□□ -1.67
BDNF-211ENST00000439476 DEFB131BA0A096LNP1 70 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 PRM2P04554 102 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 SMCR5Q8TEV8 140 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 TLN2Q9Y4G6 2542 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 TRAV7A0A075B6U4 112 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 C8orf87E5RJ46 101 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 HIGD2AQ9BW72 106 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 CDC42SE2Q9NRR3 84 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 KIF25-AS1Q9Y6Z4 181 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 C19orf84I3L1E1 186 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 ADAMTSL4-AS1Q5T5F5 129 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 SETD2Q9BYW2 2564 aaPredicted RBP4.6□□□□□ -1.67
BDNF-211ENST00000439476 ESM1Q9NQ30 184 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 ZNF702PQ9H963 129 aa4.6□□□□□ -1.67
BDNF-211ENST00000439476 Q6ZQY7 126 aa4.59□□□□□ -1.67
BDNF-211ENST00000439476 C6orf223Q8N319 242 aa4.59□□□□□ -1.67
BDNF-211ENST00000439476 MTORP42345 2549 aa4.59□□□□□ -1.67
BDNF-211ENST00000439476 EGFEM1PQ0D2K5 195 aa4.59□□□□□ -1.67
BDNF-211ENST00000439476 Q6ZRU5 148 aa4.59□□□□□ -1.67
BDNF-211ENST00000439476 SMIM11BQ8TCY0 68 aa4.59□□□□□ -1.67
BDNF-211ENST00000439476 FN1P02751 2386 aaKnown RBP4.59□□□□□ -1.67
BDNF-211ENST00000439476 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.68
BDNF-211ENST00000439476 ZNF73O43830 326 aaPredicted RBP4.58□□□□□ -1.68
BDNF-211ENST00000439476 LINC00315P59091 139 aa4.58□□□□□ -1.68
BDNF-211ENST00000439476 NTM-AS1Q6ZSK4 140 aa4.58□□□□□ -1.68
BDNF-211ENST00000439476 BOD1L1Q8NFC6 3051 aa4.58□□□□□ -1.68
BDNF-211ENST00000439476 BEAN1Q3B7T3 259 aa4.58□□□□□ -1.68
BDNF-211ENST00000439476 C1orf158Q8N1D5 194 aa4.58□□□□□ -1.68
BDNF-211ENST00000439476 AMELXQ99217 191 aa4.58□□□□□ -1.68
BDNF-211ENST00000439476 LINC00242Q5T6M2 205 aa4.57□□□□□ -1.68
BDNF-211ENST00000439476 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.57□□□□□ -1.68
BDNF-211ENST00000439476 A0A1W2PPR1 153 aa4.57□□□□□ -1.68
BDNF-211ENST00000439476 DEFB4AO15263 64 aa4.57□□□□□ -1.68
BDNF-211ENST00000439476 BCE1O60756 84 aa4.57□□□□□ -1.68
BDNF-211ENST00000439476 SLPIP03973 132 aa4.57□□□□□ -1.68
BDNF-211ENST00000439476 Q8N9L7 120 aa4.57□□□□□ -1.68
BDNF-211ENST00000439476 C7orf33Q8WU49 177 aa4.57□□□□□ -1.68
BDNF-211ENST00000439476 TRBV10-3A0A0K0K1G6 114 aa4.56□□□□□ -1.68
BDNF-211ENST00000439476 LRCOL1A6NCL2 159 aa4.56□□□□□ -1.68
BDNF-211ENST00000439476 PSPHP1O15172 72 aa4.56□□□□□ -1.68
BDNF-211ENST00000439476 PRB1P04280 392 aa4.56□□□□□ -1.68
BDNF-211ENST00000439476 SMIM1B2RUZ4 78 aa4.56□□□□□ -1.68
BDNF-211ENST00000439476 IGKV2-24A0A0C4DH68 120 aa4.56□□□□□ -1.68
BDNF-211ENST00000439476 BBC3Q96PG8 261 aaPredicted RBP4.56□□□□□ -1.68
BDNF-211ENST00000439476 XAGE1AQ9HD64 81 aa4.55□□□□□ -1.68
BDNF-211ENST00000439476 A0A1B0GUV1 79 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms