RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
RTN4-211ENST00000438462 PYDC2Q56P42 97 aa5.27□□□□□ -1.57
RTN4-211ENST00000438462 Q8IZM0 81 aa5.27□□□□□ -1.57
RTN4-211ENST00000438462 H0YIZ8 118 aa5.26□□□□□ -1.57
RTN4-211ENST00000438462 BAGE2Q86Y30 109 aa5.26□□□□□ -1.57
RTN4-211ENST00000438462 ACTR3CQ9C0K3 210 aaPredicted RBP5.26□□□□□ -1.57
RTN4-211ENST00000438462 VCX3AQ9NNX9 186 aa5.26□□□□□ -1.57
RTN4-211ENST00000438462 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
RTN4-211ENST00000438462 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
RTN4-211ENST00000438462 VPREB1P12018 145 aa5.24□□□□□ -1.57
RTN4-211ENST00000438462 ANKRD39Q53RE8 183 aa5.24□□□□□ -1.57
RTN4-211ENST00000438462 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
RTN4-211ENST00000438462 SEC22CQ9BRL7 303 aa5.24□□□□□ -1.57
RTN4-211ENST00000438462 TCEAL7Q9BRU2 100 aa5.24□□□□□ -1.57
RTN4-211ENST00000438462 ALKBH7Q9BT30 221 aaPredicted RBP5.24□□□□□ -1.57
RTN4-211ENST00000438462 CCDC160A6NGH7 325 aa5.23□□□□□ -1.57
RTN4-211ENST00000438462 RPL39P62891 51 aaKnown RBP5.23□□□□□ -1.57
RTN4-211ENST00000438462 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
RTN4-211ENST00000438462 LINC01561Q8N1V8 128 aa5.23□□□□□ -1.57
RTN4-211ENST00000438462 ATP6V0CP27449 155 aa5.22□□□□□ -1.57
RTN4-211ENST00000438462 BTCP35070 178 aa5.22□□□□□ -1.57
RTN4-211ENST00000438462 ZNF726P1Q15940 193 aa5.22□□□□□ -1.57
RTN4-211ENST00000438462 Q75L30 129 aa5.22□□□□□ -1.57
RTN4-211ENST00000438462 TMEM18Q96B42 140 aa5.22□□□□□ -1.57
RTN4-211ENST00000438462 CNFNQ9BYD5 112 aa5.22□□□□□ -1.57
RTN4-211ENST00000438462 HMCN1Q96RW7 5635 aa5.22□□□□□ -1.57
RTN4-211ENST00000438462 NAP1L6A6NFF2 107 aa5.21□□□□□ -1.58
RTN4-211ENST00000438462 PRSS47A8MTI9 375 aa5.21□□□□□ -1.58
RTN4-211ENST00000438462 A8MWP4 228 aa5.21□□□□□ -1.58
RTN4-211ENST00000438462 S100A9P06702 114 aaKnown RBP5.21□□□□□ -1.58
RTN4-211ENST00000438462 CST9LP1Q5W188 147 aa5.21□□□□□ -1.58
RTN4-211ENST00000438462 SMIM15Q7Z3B0 74 aa5.21□□□□□ -1.58
RTN4-211ENST00000438462 XKRY2A2RUG3 117 aa5.2□□□□□ -1.58
RTN4-211ENST00000438462 MBP02144 154 aa5.2□□□□□ -1.58
RTN4-211ENST00000438462 MRPS36P82909 103 aaKnown RBP5.2□□□□□ -1.58
RTN4-211ENST00000438462 C1orf195Q5TG92 126 aa5.2□□□□□ -1.58
RTN4-211ENST00000438462 Q6ZN92 141 aa5.2□□□□□ -1.58
RTN4-211ENST00000438462 C9orf62Q8N4C0 152 aa5.2□□□□□ -1.58
RTN4-211ENST00000438462 RAB5BP61020 215 aa5.19□□□□□ -1.58
RTN4-211ENST00000438462 Q9H521 79 aa5.19□□□□□ -1.58
RTN4-211ENST00000438462 VCYO14598 125 aa5.18□□□□□ -1.58
RTN4-211ENST00000438462 ERC2-IT1O76042 136 aa5.18□□□□□ -1.58
RTN4-211ENST00000438462 SIX6O95475 246 aa5.18□□□□□ -1.58
RTN4-211ENST00000438462 MT1BP07438 61 aa5.18□□□□□ -1.58
RTN4-211ENST00000438462 PSMG3Q9BT73 122 aaPredicted RBP5.18□□□□□ -1.58
RTN4-211ENST00000438462 SPANXA1Q9NS26 97 aa5.18□□□□□ -1.58
RTN4-211ENST00000438462 V9GYH0 126 aa5.18□□□□□ -1.58
RTN4-211ENST00000438462 A0A0G2JQZ4 141 aa5.17□□□□□ -1.58
RTN4-211ENST00000438462 CTXND1A0A1B0GTU2 59 aa5.17□□□□□ -1.58
RTN4-211ENST00000438462 H3BS24 57 aa5.17□□□□□ -1.58
RTN4-211ENST00000438462 CXCL5P42830 114 aa5.17□□□□□ -1.58
RTN4-211ENST00000438462 Q8NDZ9 215 aa5.17□□□□□ -1.58
RTN4-211ENST00000438462 ANAPC16Q96DE5 110 aa5.17□□□□□ -1.58
RTN4-211ENST00000438462 A0A087WXM4 84 aa5.16□□□□□ -1.58
RTN4-211ENST00000438462 NUDT15Q9NV35 164 aa5.16□□□□□ -1.58
RTN4-211ENST00000438462 H7C2G1 150 aa5.15□□□□□ -1.59
RTN4-211ENST00000438462 SERF2P84101 59 aa5.15□□□□□ -1.59
RTN4-211ENST00000438462 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.59
RTN4-211ENST00000438462 TNFSF18Q9UNG2 199 aa5.15□□□□□ -1.59
RTN4-211ENST00000438462 RAB14P61106 215 aa5.14□□□□□ -1.59
RTN4-211ENST00000438462 RPL24P83731 157 aaKnown RBP5.14□□□□□ -1.59
RTN4-211ENST00000438462 C10orf91Q5T1B1 145 aa5.14□□□□□ -1.59
RTN4-211ENST00000438462 ETDCA0A1B0GVM5 59 aa5.12□□□□□ -1.59
RTN4-211ENST00000438462 PRYO14603 147 aa5.12□□□□□ -1.59
RTN4-211ENST00000438462 SUMO2P61956 95 aaKnown RBP5.12□□□□□ -1.59
RTN4-211ENST00000438462 Q1RN00 199 aa5.12□□□□□ -1.59
RTN4-211ENST00000438462 MPLKIPQ8TAP9 179 aa5.12□□□□□ -1.59
RTN4-211ENST00000438462 A8MWL6 223 aa5.11□□□□□ -1.59
RTN4-211ENST00000438462 SMKR1H3BMG3 65 aa5.11□□□□□ -1.59
RTN4-211ENST00000438462 PAGE4O60829 102 aa5.11□□□□□ -1.59
RTN4-211ENST00000438462 SPRR1AP35321 89 aa5.11□□□□□ -1.59
RTN4-211ENST00000438462 RPL35P42766 123 aaKnown RBP5.11□□□□□ -1.59
RTN4-211ENST00000438462 CNPY1Q3B7I2 92 aa5.11□□□□□ -1.59
RTN4-211ENST00000438462 SMIM29Q86T20 159 aa5.11□□□□□ -1.59
RTN4-211ENST00000438462 PYGO1Q9Y3Y4 419 aa5.11□□□□□ -1.59
RTN4-211ENST00000438462 TRBV20OR9-2A0A075B6H5 130 aa5.1□□□□□ -1.59
RTN4-211ENST00000438462 LOC107984156A0A0G2JMH3 177 aa5.1□□□□□ -1.59
RTN4-211ENST00000438462 MAP1LC3B2A6NCE7 125 aa5.1□□□□□ -1.59
RTN4-211ENST00000438462 TRIQKQ629K1 86 aa5.1□□□□□ -1.59
RTN4-211ENST00000438462 ARL17AQ8IVW1 177 aa5.1□□□□□ -1.59
RTN4-211ENST00000438462 PPP1R1CQ8WVI7 109 aa5.1□□□□□ -1.59
RTN4-211ENST00000438462 OBSCN-AS1Q96MR7 158 aa5.1□□□□□ -1.59
RTN4-211ENST00000438462 MAP1LC3BQ9GZQ8 125 aa5.1□□□□□ -1.59
RTN4-211ENST00000438462 IGLV4-3A0A075B6K6 122 aa5.09□□□□□ -1.59
RTN4-211ENST00000438462 CENPXA8MT69 81 aa5.09□□□□□ -1.59
RTN4-211ENST00000438462 CENPWQ5EE01 88 aa5.09□□□□□ -1.59
RTN4-211ENST00000438462 Q5VV11 94 aa5.09□□□□□ -1.59
RTN4-211ENST00000438462 TMUB2Q71RG4 321 aa5.09□□□□□ -1.59
RTN4-211ENST00000438462 EIF5A2Q9GZV4 153 aaKnown RBP5.09□□□□□ -1.59
RTN4-211ENST00000438462 SND1-IT1Q9HBX3 110 aa5.09□□□□□ -1.59
RTN4-211ENST00000438462 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
RTN4-211ENST00000438462 TMEM191AQ9H0A3 160 aa5.08□□□□□ -1.6
RTN4-211ENST00000438462 MPC2O95563 127 aa5.07□□□□□ -1.6
RTN4-211ENST00000438462 HRES1P13985 223 aa5.07□□□□□ -1.6
RTN4-211ENST00000438462 PFN2P35080 140 aa5.07□□□□□ -1.6
RTN4-211ENST00000438462 IFI27P40305 119 aaPredicted RBP5.07□□□□□ -1.6
RTN4-211ENST00000438462 ZC2HC1BQ5TFG8 222 aa5.07□□□□□ -1.6
RTN4-211ENST00000438462 Q5XG85 94 aa5.07□□□□□ -1.6
RTN4-211ENST00000438462 TEX43Q6ZNM6 134 aa5.07□□□□□ -1.6
RTN4-211ENST00000438462 PPP1R2P9O14990 202 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms