RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 C9orf116Q5BN46 136 aaPredicted RBP11.13□□□□□ -0.63
NCSTN-208ENST00000438008 PDZD11Q5EBL8 140 aa11.13□□□□□ -0.63
NCSTN-208ENST00000438008 C6orf226Q5I0X4 101 aa11.13□□□□□ -0.63
NCSTN-208ENST00000438008 Q6ZRP5 223 aa11.13□□□□□ -0.63
NCSTN-208ENST00000438008 LINC00469Q8N7U9 141 aa11.13□□□□□ -0.63
NCSTN-208ENST00000438008 TOMM7Q9P0U1 55 aa11.12□□□□□ -0.63
NCSTN-208ENST00000438008 DMBT1Q9UGM3 2413 aaPredicted RBP11.11□□□□□ -0.63
NCSTN-208ENST00000438008 OXTP01178 125 aa11.11□□□□□ -0.63
NCSTN-208ENST00000438008 CKS1BP61024 79 aa11.11□□□□□ -0.63
NCSTN-208ENST00000438008 SMIM1B2RUZ4 78 aa11.1□□□□□ -0.63
NCSTN-208ENST00000438008 PRR3P79522 188 aaKnown RBP11.1□□□□□ -0.63
NCSTN-208ENST00000438008 PMCHL1Q16048 86 aa11.1□□□□□ -0.63
NCSTN-208ENST00000438008 CHCHD1Q96BP2 118 aaKnown RBP11.1□□□□□ -0.63
NCSTN-208ENST00000438008 NDUFC2-KCTD14E9PQ53 114 aa11.09□□□□□ -0.63
NCSTN-208ENST00000438008 J3QL48 77 aa11.09□□□□□ -0.63
NCSTN-208ENST00000438008 ATP5LO75964 103 aa11.09□□□□□ -0.63
NCSTN-208ENST00000438008 IGLC3P0DOY3 106 aa11.09□□□□□ -0.63
NCSTN-208ENST00000438008 FAT3Q8TDW7 4589 aa11.08□□□□□ -0.64
NCSTN-208ENST00000438008 CXCL5P42830 114 aa11.08□□□□□ -0.64
NCSTN-208ENST00000438008 LRP1Q07954 4544 aaKnown RBP11.07□□□□□ -0.64
NCSTN-208ENST00000438008 F8VRH5 84 aa11.07□□□□□ -0.64
NCSTN-208ENST00000438008 NDUFA6P56556 154 aa11.07□□□□□ -0.64
NCSTN-208ENST00000438008 GAGE2EQ4V326 116 aa11.07□□□□□ -0.64
NCSTN-208ENST00000438008 GAGE2DQ9UEU5 116 aa11.07□□□□□ -0.64
NCSTN-208ENST00000438008 HERC1Q15751 4861 aa11.07□□□□□ -0.64
NCSTN-208ENST00000438008 H3BRM9 83 aa11.06□□□□□ -0.64
NCSTN-208ENST00000438008 TRGC2P03986 189 aa11.06□□□□□ -0.64
NCSTN-208ENST00000438008 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
NCSTN-208ENST00000438008 SPINK8P0C7L1 97 aa11.05□□□□□ -0.64
NCSTN-208ENST00000438008 FAM168BA1KXE4 195 aa11.04□□□□□ -0.64
NCSTN-208ENST00000438008 PHF5AQ7RTV0 110 aaKnown RBP11.04□□□□□ -0.64
NCSTN-208ENST00000438008 COLCA2A8K830 154 aa11.03□□□□□ -0.64
NCSTN-208ENST00000438008 C9orf129Q5T035 196 aaKnown RBP11.03□□□□□ -0.64
NCSTN-208ENST00000438008 BAGE3Q86Y29 109 aa11.03□□□□□ -0.64
NCSTN-208ENST00000438008 IGLV5-39A0A0G2JS06 123 aa11.02□□□□□ -0.65
NCSTN-208ENST00000438008 ZNF22P17026 224 aaPredicted RBP11.02□□□□□ -0.65
NCSTN-208ENST00000438008 KRTAP7-1Q8IUC3 87 aa11.02□□□□□ -0.65
NCSTN-208ENST00000438008 FAM19A5Q7Z5A7 132 aaPredicted RBP11.01□□□□□ -0.65
NCSTN-208ENST00000438008 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
NCSTN-208ENST00000438008 HSBP1O75506 76 aa11□□□□□ -0.65
NCSTN-208ENST00000438008 SRSF9Q13242 221 aaKnown RBP eCLIP11□□□□□ -0.65
NCSTN-208ENST00000438008 SPINK6Q6UWN8 80 aa11□□□□□ -0.65
NCSTN-208ENST00000438008 IFI27L1Q96BM0 104 aa11□□□□□ -0.65
NCSTN-208ENST00000438008 PSORS1C2Q9UIG4 136 aa11□□□□□ -0.65
NCSTN-208ENST00000438008 C11orf86A6NJI1 115 aa10.99□□□□□ -0.65
NCSTN-208ENST00000438008 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
NCSTN-208ENST00000438008 ODF1Q14990 250 aa10.98□□□□□ -0.65
NCSTN-208ENST00000438008 M0QXV9 152 aa10.97□□□□□ -0.65
NCSTN-208ENST00000438008 LINC00310P59036 64 aa10.97□□□□□ -0.65
NCSTN-208ENST00000438008 FAM19A2Q8N3H0 131 aa10.97□□□□□ -0.65
NCSTN-208ENST00000438008 TMEM170BQ5T4T1 132 aa10.96□□□□□ -0.65
NCSTN-208ENST00000438008 XAGE1AQ9HD64 81 aa10.96□□□□□ -0.65
NCSTN-208ENST00000438008 SERF1AO75920 110 aa10.95□□□□□ -0.66
NCSTN-208ENST00000438008 KRTAP11-1Q8IUC1 163 aa10.95□□□□□ -0.66
NCSTN-208ENST00000438008 C1orf137Q5JT78 98 aa10.94□□□□□ -0.66
NCSTN-208ENST00000438008 SERTAD4-AS1Q5TG53 156 aa10.94□□□□□ -0.66
NCSTN-208ENST00000438008 MT1HL1P0DM35 61 aa10.93□□□□□ -0.66
NCSTN-208ENST00000438008 C22orf24Q9Y442 160 aa10.93□□□□□ -0.66
NCSTN-208ENST00000438008 LEPROTL1O95214 131 aa10.92□□□□□ -0.66
NCSTN-208ENST00000438008 SFTA2Q6UW10 78 aa10.92□□□□□ -0.66
NCSTN-208ENST00000438008 PLA2G2DQ9UNK4 145 aa10.92□□□□□ -0.66
NCSTN-208ENST00000438008 TMEM223A0PJW6 202 aa10.91□□□□□ -0.66
NCSTN-208ENST00000438008 NUPR1O60356 82 aa10.91□□□□□ -0.66
NCSTN-208ENST00000438008 SCO1O75880 301 aa10.91□□□□□ -0.66
NCSTN-208ENST00000438008 UBE2BP63146 152 aa10.91□□□□□ -0.66
NCSTN-208ENST00000438008 REG3GQ6UW15 175 aa10.91□□□□□ -0.66
NCSTN-208ENST00000438008 LINC01600Q96MT4 127 aa10.91□□□□□ -0.66
NCSTN-208ENST00000438008 TP73-AS1Q9UF72 201 aa10.91□□□□□ -0.66
NCSTN-208ENST00000438008 IGLV7-43P04211 117 aa10.9□□□□□ -0.66
NCSTN-208ENST00000438008 LBHQ53QV2 105 aaPredicted RBP10.9□□□□□ -0.66
NCSTN-208ENST00000438008 COX17Q14061 63 aa10.89□□□□□ -0.67
NCSTN-208ENST00000438008 ZNF625Q96I27 306 aaPredicted RBP10.89□□□□□ -0.67
NCSTN-208ENST00000438008 HSPB8Q9UJY1 196 aa10.89□□□□□ -0.67
NCSTN-208ENST00000438008 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
NCSTN-208ENST00000438008 IGLV5-37A0A075B6J1 123 aa10.87□□□□□ -0.67
NCSTN-208ENST00000438008 PFN2P35080 140 aa10.87□□□□□ -0.67
NCSTN-208ENST00000438008 MRPL55Q7Z7F7 128 aaKnown RBP10.87□□□□□ -0.67
NCSTN-208ENST00000438008 TNXBP22105 4242 aa10.85□□□□□ -0.67
NCSTN-208ENST00000438008 H0Y8G0 127 aa10.85□□□□□ -0.67
NCSTN-208ENST00000438008 HIST1H2BKO60814 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST1H2BJP06899 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 FABP4P15090 132 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST1H2BOP23527 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST1H2BBP33778 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST1H2BDP58876 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST1H2BCP62807 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST2H2BEQ16778 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST1H2BHQ93079 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 DIRC1Q969H9 104 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST1H2BNQ99877 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 HIST1H2BMQ99879 126 aa10.84□□□□□ -0.67
NCSTN-208ENST00000438008 LINC00167Q96N53 147 aa10.83□□□□□ -0.68
NCSTN-208ENST00000438008 SND1-IT1Q9HBX3 110 aa10.83□□□□□ -0.68
NCSTN-208ENST00000438008 PLNP26678 52 aa10.82□□□□□ -0.68
NCSTN-208ENST00000438008 KRTAP10-8P60410 259 aa10.82□□□□□ -0.68
NCSTN-208ENST00000438008 H0Y9J4 135 aa10.81□□□□□ -0.68
NCSTN-208ENST00000438008 NKAPP1Q8N9T2 125 aa10.81□□□□□ -0.68
NCSTN-208ENST00000438008 DPM2O94777 84 aa10.8□□□□□ -0.68
NCSTN-208ENST00000438008 MAP1LC3CQ9BXW4 147 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms