RNA–Protein interactions for RNA: ENST00000437995.1

SURF1-202, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 5

Gene SURF1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-202ENST00000437995 TOMM7Q9P0U1 55 aa12.21□□□□□ -0.45
SURF1-202ENST00000437995 A0A1W2PNN7 141 aa12.2□□□□□ -0.46
SURF1-202ENST00000437995 C9orf116Q5BN46 136 aaPredicted RBP12.2□□□□□ -0.46
SURF1-202ENST00000437995 HBDP02042 147 aa12.19□□□□□ -0.46
SURF1-202ENST00000437995 C6orf226Q5I0X4 101 aa12.19□□□□□ -0.46
SURF1-202ENST00000437995 Q6ZRP5 223 aa12.19□□□□□ -0.46
SURF1-202ENST00000437995 IGLV5-45A0A087WSX0 123 aa12.18□□□□□ -0.46
SURF1-202ENST00000437995 CKS1BP61024 79 aa12.18□□□□□ -0.46
SURF1-202ENST00000437995 PRR3P79522 188 aaKnown RBP12.18□□□□□ -0.46
SURF1-202ENST00000437995 OXTP01178 125 aa12.17□□□□□ -0.46
SURF1-202ENST00000437995 PMCHL1Q16048 86 aa12.17□□□□□ -0.46
SURF1-202ENST00000437995 SMIM1B2RUZ4 78 aa12.16□□□□□ -0.46
SURF1-202ENST00000437995 GAGE2EQ4V326 116 aa12.16□□□□□ -0.46
SURF1-202ENST00000437995 GAGE2DQ9UEU5 116 aa12.16□□□□□ -0.46
SURF1-202ENST00000437995 NDUFC2-KCTD14E9PQ53 114 aa12.15□□□□□ -0.46
SURF1-202ENST00000437995 PDZD11Q5EBL8 140 aa12.15□□□□□ -0.46
SURF1-202ENST00000437995 NDUFA6P56556 154 aa12.14□□□□□ -0.47
SURF1-202ENST00000437995 ATP5LO75964 103 aa12.13□□□□□ -0.47
SURF1-202ENST00000437995 CXCL5P42830 114 aa12.13□□□□□ -0.47
SURF1-202ENST00000437995 CHCHD1Q96BP2 118 aaKnown RBP12.13□□□□□ -0.47
SURF1-202ENST00000437995 FAT3Q8TDW7 4589 aa12.12□□□□□ -0.47
SURF1-202ENST00000437995 F8VRH5 84 aa12.12□□□□□ -0.47
SURF1-202ENST00000437995 SPINK8P0C7L1 97 aa12.12□□□□□ -0.47
SURF1-202ENST00000437995 IGLC3P0DOY3 106 aa12.12□□□□□ -0.47
SURF1-202ENST00000437995 COX7B2Q8TF08 81 aa12.12□□□□□ -0.47
SURF1-202ENST00000437995 LRP1Q07954 4544 aaKnown RBP12.12□□□□□ -0.47
SURF1-202ENST00000437995 FAM168BA1KXE4 195 aa12.11□□□□□ -0.47
SURF1-202ENST00000437995 H3BRM9 83 aa12.11□□□□□ -0.47
SURF1-202ENST00000437995 PHF5AQ7RTV0 110 aaKnown RBP12.11□□□□□ -0.47
SURF1-202ENST00000437995 HERC1Q15751 4861 aa12.11□□□□□ -0.47
SURF1-202ENST00000437995 FAM19A5Q7Z5A7 132 aaPredicted RBP12.1□□□□□ -0.47
SURF1-202ENST00000437995 TRGC2P03986 189 aa12.08□□□□□ -0.48
SURF1-202ENST00000437995 C9orf129Q5T035 196 aaKnown RBP12.08□□□□□ -0.48
SURF1-202ENST00000437995 BAGE3Q86Y29 109 aa12.08□□□□□ -0.48
SURF1-202ENST00000437995 ZNF22P17026 224 aaPredicted RBP12.07□□□□□ -0.48
SURF1-202ENST00000437995 KRTAP7-1Q8IUC3 87 aa12.06□□□□□ -0.48
SURF1-202ENST00000437995 PSORS1C2Q9UIG4 136 aa12.06□□□□□ -0.48
SURF1-202ENST00000437995 HSBP1O75506 76 aa12.05□□□□□ -0.48
SURF1-202ENST00000437995 IGLV5-39A0A0G2JS06 123 aa12.04□□□□□ -0.48
SURF1-202ENST00000437995 C11orf86A6NJI1 115 aa12.04□□□□□ -0.48
SURF1-202ENST00000437995 M0QXV9 152 aa12.04□□□□□ -0.48
SURF1-202ENST00000437995 SPINK6Q6UWN8 80 aa12.04□□□□□ -0.48
SURF1-202ENST00000437995 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
SURF1-202ENST00000437995 COLCA2A8K830 154 aa12.03□□□□□ -0.48
SURF1-202ENST00000437995 XAGE1AQ9HD64 81 aa12.03□□□□□ -0.48
SURF1-202ENST00000437995 CHTOPQ9Y3Y2 248 aaKnown RBP12.03□□□□□ -0.48
SURF1-202ENST00000437995 SRSF9Q13242 221 aaKnown RBP eCLIP12.02□□□□□ -0.49
SURF1-202ENST00000437995 TRAV12-1A0A0B4J245 112 aa12.01□□□□□ -0.49
SURF1-202ENST00000437995 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
SURF1-202ENST00000437995 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
SURF1-202ENST00000437995 FAM19A2Q8N3H0 131 aa12.01□□□□□ -0.49
SURF1-202ENST00000437995 KRTAP11-1Q8IUC1 163 aa12□□□□□ -0.49
SURF1-202ENST00000437995 SERF1AO75920 110 aa11.99□□□□□ -0.49
SURF1-202ENST00000437995 MT1HL1P0DM35 61 aa11.99□□□□□ -0.49
SURF1-202ENST00000437995 UBE2BP63146 152 aa11.99□□□□□ -0.49
SURF1-202ENST00000437995 SERTAD4-AS1Q5TG53 156 aa11.99□□□□□ -0.49
SURF1-202ENST00000437995 LINC00310P59036 64 aa11.98□□□□□ -0.49
SURF1-202ENST00000437995 REG3GQ6UW15 175 aa11.97□□□□□ -0.49
SURF1-202ENST00000437995 C22orf24Q9Y442 160 aa11.96□□□□□ -0.49
SURF1-202ENST00000437995 IGLV7-43P04211 117 aa11.95□□□□□ -0.5
SURF1-202ENST00000437995 ODF1Q14990 250 aa11.95□□□□□ -0.5
SURF1-202ENST00000437995 LINC01600Q96MT4 127 aa11.95□□□□□ -0.5
SURF1-202ENST00000437995 SCO1O75880 301 aa11.94□□□□□ -0.5
SURF1-202ENST00000437995 LEPROTL1O95214 131 aa11.94□□□□□ -0.5
SURF1-202ENST00000437995 LBHQ53QV2 105 aaPredicted RBP11.94□□□□□ -0.5
SURF1-202ENST00000437995 SFTA2Q6UW10 78 aa11.94□□□□□ -0.5
SURF1-202ENST00000437995 TP73-AS1Q9UF72 201 aa11.94□□□□□ -0.5
SURF1-202ENST00000437995 TMEM223A0PJW6 202 aa11.93□□□□□ -0.5
SURF1-202ENST00000437995 PFN2P35080 140 aa11.93□□□□□ -0.5
SURF1-202ENST00000437995 NUPR1O60356 82 aa11.92□□□□□ -0.5
SURF1-202ENST00000437995 ERG28Q9UKR5 140 aa11.92□□□□□ -0.5
SURF1-202ENST00000437995 PLA2G2DQ9UNK4 145 aa11.92□□□□□ -0.5
SURF1-202ENST00000437995 H0Y8G0 127 aa11.91□□□□□ -0.5
SURF1-202ENST00000437995 MRPL55Q7Z7F7 128 aaKnown RBP11.91□□□□□ -0.5
SURF1-202ENST00000437995 HSPB8Q9UJY1 196 aa11.91□□□□□ -0.5
SURF1-202ENST00000437995 COX17Q14061 63 aa11.9□□□□□ -0.5
SURF1-202ENST00000437995 ZNF625Q96I27 306 aaPredicted RBP11.9□□□□□ -0.5
SURF1-202ENST00000437995 DIRC1Q969H9 104 aa11.89□□□□□ -0.51
SURF1-202ENST00000437995 IGLV5-37A0A075B6J1 123 aa11.88□□□□□ -0.51
SURF1-202ENST00000437995 FABP4P15090 132 aa11.88□□□□□ -0.51
SURF1-202ENST00000437995 SND1-IT1Q9HBX3 110 aa11.87□□□□□ -0.51
SURF1-202ENST00000437995 NKAPP1Q8N9T2 125 aa11.86□□□□□ -0.51
SURF1-202ENST00000437995 LINC00167Q96N53 147 aa11.86□□□□□ -0.51
SURF1-202ENST00000437995 TNXBP22105 4242 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 H0Y9J4 135 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST1H2BKO60814 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST1H2BJP06899 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST1H2BOP23527 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST1H2BBP33778 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST1H2BDP58876 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST1H2BCP62807 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST2H2BEQ16778 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST1H2BHQ93079 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST1H2BNQ99877 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 HIST1H2BMQ99879 126 aa11.85□□□□□ -0.51
SURF1-202ENST00000437995 PLNP26678 52 aa11.84□□□□□ -0.51
SURF1-202ENST00000437995 KRTAP10-8P60410 259 aa11.84□□□□□ -0.51
SURF1-202ENST00000437995 GAGE10A6NGK3 116 aa11.83□□□□□ -0.52
SURF1-202ENST00000437995 RPL37AP8A6NKH3 93 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms