RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 COTL1Q14019 142 aa7.03□□□□□ -1.28
SMAD9-IT1-201ENST00000437983 LBHQ53QV2 105 aaPredicted RBP7.03□□□□□ -1.28
SMAD9-IT1-201ENST00000437983 FAM104BQ5XKR9 115 aa7.03□□□□□ -1.28
SMAD9-IT1-201ENST00000437983 ATP5L2Q7Z4Y8 100 aa7.03□□□□□ -1.28
SMAD9-IT1-201ENST00000437983 BTF3L4Q96K17 158 aa7.03□□□□□ -1.28
SMAD9-IT1-201ENST00000437983 IMMP2LQ96T52 175 aa7.03□□□□□ -1.28
SMAD9-IT1-201ENST00000437983 S100PP25815 95 aa7.02□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 UBE2BP63146 152 aa7.02□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 MRPL51Q4U2R6 128 aaKnown RBP7.02□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 MRAP2Q96G30 205 aa7.02□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 SYNE2Q8WXH0 6885 aaKnown RBP7.02□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 TMEM242Q9NWH2 141 aa7.01□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 D6R8Y8 96 aa7□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 TSHBP01222 138 aa7□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 LINC00304Q8N9R0 145 aa7□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 ST20Q9HBF5 79 aa7□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 TRAV9-1A0A075B6T8 112 aa6.99□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 SDHAF1A6NFY7 115 aa6.99□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 M0QXV9 152 aa6.99□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 CKS2P33552 79 aa6.99□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 KRTAP9-3Q9BYQ3 159 aa6.99□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 TGIF2-C20orf24A0A0A6YYL0 155 aa6.98□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 TRBV6-5A0A0K0K1A5 114 aa6.98□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 TMEM136Q6ZRR5 245 aa6.98□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 LINC00337Q8N6G1 96 aa6.98□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 I3L3M4 83 aa6.97□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 NPYP01303 97 aa6.97□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 PMCHP20382 165 aa6.97□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 ORMDL3Q8N138 153 aa6.97□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 C2orf48Q96LS8 159 aa6.97□□□□□ -1.29
SMAD9-IT1-201ENST00000437983 PPP1R17O96001 155 aa6.96□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 SS18Q15532 418 aa6.96□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 KIAA1644Q3SXP7 199 aa6.96□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 CBLN2Q8IUK8 224 aa6.96□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 PRELID3AQ96N28 172 aa6.96□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 IGLV5-37A0A075B6J1 123 aa6.95□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 APCSP02743 223 aa6.95□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 PPBPP02775 128 aa6.95□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 ESDP10768 282 aa6.95□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 POLR2KP53803 58 aaKnown RBP6.95□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 TRBV24-1A0A075B6N3 115 aa6.94□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 TRBV27A0A0K0K1C4 114 aa6.94□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 LCE5AQ5TCM9 118 aa6.94□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 KRTAP5-3Q6L8H2 238 aa6.94□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 C20orf78Q9BR46 151 aa6.94□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 SMIM2Q9BVW6 85 aa6.94□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 GNB1LQ9BYB4 327 aa6.94□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 LOC389332A0A1B0GUA5 103 aa6.93□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 H7C423 109 aa6.93□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 COX7A2LO14548 114 aa6.93□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 FCER1GP30273 86 aa6.93□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 COX19Q49B96 90 aa6.93□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 YPEL4Q96NS1 127 aa6.93□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 KIR2DL4Q99706 377 aa6.93□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 SMCO4Q9NRQ5 59 aa6.93□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 PRSS2P07478 247 aa6.92□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 ZNF25P17030 456 aaPredicted RBP6.92□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 RPL32P62910 135 aaKnown RBP6.92□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 SPAG11BQ08648 103 aa6.92□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 FABP9Q0Z7S8 132 aa6.92□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 C5orf38Q86SI9 138 aa6.92□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 TMEM101Q96IK0 257 aa6.92□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 MAP1LC3AQ9H492 121 aa6.92□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 LAMTOR2Q9Y2Q5 125 aa6.92□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 TCAPO15273 167 aa6.91□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 LINC00242Q5T6M2 205 aa6.91□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 CDC42SE2Q9NRR3 84 aa6.91□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 MRPL35Q9NZE8 188 aaKnown RBP6.91□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 TRAPPC1Q9Y5R8 145 aa6.91□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 MACF1Q9UPN3 7388 aaKnown RBP6.9□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 SCO1O75880 301 aa6.9□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 TLX1NBP0CAT3 122 aa6.9□□□□□ -1.3
SMAD9-IT1-201ENST00000437983 RAB5AP20339 215 aa6.89□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 UNQ6190/PRO20217Q6UXQ8 127 aa6.89□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 ALKBH7Q9BT30 221 aaPredicted RBP6.89□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 M0R2T5 61 aa6.88□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 Q8N8P6 123 aa6.88□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 NUPR1O60356 82 aa6.87□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 RPL28P46779 137 aaKnown RBP6.87□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 RNASE13Q5GAN3 156 aaKnown RBP6.87□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 FP248Q71RG6 208 aaPredicted RBP6.87□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 NXT2Q9NPJ8 142 aaKnown RBP6.87□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 C1orf196B1AJZ1 125 aa6.86□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 ATP6V1G1O75348 118 aa6.86□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 RPL24P83731 157 aaKnown RBP6.86□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 MRPL52Q86TS9 123 aaKnown RBP6.86□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 UBE2D4Q9Y2X8 147 aa6.86□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 COLCA2A8K830 154 aa6.85□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 ORAOV1Q8WV07 137 aa6.85□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 IGKV2D-26A0A0A0MRZ7 120 aa6.84□□□□□ -1.31
SMAD9-IT1-201ENST00000437983 TRAV13-1A0A0B4J241 112 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms