RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 LINC00167Q96N53 147 aa4.17□□□□□ -1.74
VRK2-206ENST00000435505 TPRP12270 2363 aaKnown RBP4.17□□□□□ -1.74
VRK2-206ENST00000435505 LYNX1G3V0Z9 82 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 LYNX1P0DP58 116 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 LINC00313P59037 77 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 Q6ZTC4 211 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 SCXQ7RTU7 201 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 C11orf68Q9H3H3 251 aaKnown RBP4.16□□□□□ -1.74
VRK2-206ENST00000435505 LAMTOR3Q9UHA4 124 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 CACNA1BQ00975 2339 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 CEP290O15078 2479 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 LRCOL1A6NCL2 159 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 IGFL3Q6UXB1 125 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 Q8N9W7 124 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 DCHS2Q6V1P9 2916 aa4.16□□□□□ -1.74
VRK2-206ENST00000435505 TRBV10-1A0A0K0K1A3 114 aa4.15□□□□□ -1.74
VRK2-206ENST00000435505 IGKV3-20P01619 116 aa4.15□□□□□ -1.74
VRK2-206ENST00000435505 CCL18P55774 89 aa4.15□□□□□ -1.74
VRK2-206ENST00000435505 Q6ZQT0 140 aa4.15□□□□□ -1.74
VRK2-206ENST00000435505 ADGRG4Q8IZF6 3080 aa4.15□□□□□ -1.75
VRK2-206ENST00000435505 A0A1W2PNU3 283 aaPredicted RBP4.15□□□□□ -1.75
VRK2-206ENST00000435505 CASC10Q5T4H9 136 aa4.15□□□□□ -1.75
VRK2-206ENST00000435505 PCNX1Q96RV3 2341 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 hDV103S1A0JD37 113 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 Q1T7F1 81 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 A0A096LNT2 108 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 LY6G6DO95868 133 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 BSPH1Q075Z2 132 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 KLK9Q2XQG4 91 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 MINOS1Q5TGZ0 78 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 DYNLRB2Q8TF09 96 aa4.14□□□□□ -1.75
VRK2-206ENST00000435505 A0A1B0GUV1 79 aa4.13□□□□□ -1.75
VRK2-206ENST00000435505 LINC00158P58513 81 aa4.13□□□□□ -1.75
VRK2-206ENST00000435505 NANOS2P60321 138 aaKnown RBP4.13□□□□□ -1.75
VRK2-206ENST00000435505 Q8N814 137 aa4.13□□□□□ -1.75
VRK2-206ENST00000435505 TMEM256-PLSCR3K7ERE1 68 aa4.13□□□□□ -1.75
VRK2-206ENST00000435505 BPY2O14599 106 aa4.13□□□□□ -1.75
VRK2-206ENST00000435505 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
VRK2-206ENST00000435505 SPINK13Q1W4C9 94 aa4.13□□□□□ -1.75
VRK2-206ENST00000435505 SVEP1Q4LDE5 3571 aa4.13□□□□□ -1.75
VRK2-206ENST00000435505 C19orf84I3L1E1 186 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 HIGD2AQ9BW72 106 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 FAM215AQ9Y5M1 114 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 SPTBN1Q01082 2364 aaKnown RBP4.12□□□□□ -1.75
VRK2-206ENST00000435505 IGLV7-46A0A075B6I9 117 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 LOC110117498A0A087WWA1 95 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 TRAV22A0A0B4J277 110 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 TRBV6-4A0A1B0GX49 114 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 Q8N377 158 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 COX7B2Q8TF08 81 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 TOMM7Q9P0U1 55 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 LINC00588Q9Y4M8 146 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 PIEZO2Q9H5I5 2752 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 LAMA5O15230 3695 aa4.12□□□□□ -1.75
VRK2-206ENST00000435505 RHPN1-AS1Q9BWJ2 59 aa4.11□□□□□ -1.75
VRK2-206ENST00000435505 DMXL1Q9Y485 3027 aa4.11□□□□□ -1.75
VRK2-206ENST00000435505 DOPEY2Q9Y3R5 2298 aa4.11□□□□□ -1.75
VRK2-206ENST00000435505 NDUFA4O00483 81 aa4.11□□□□□ -1.75
VRK2-206ENST00000435505 PRM2P04554 102 aa4.11□□□□□ -1.75
VRK2-206ENST00000435505 C1orf64Q8NEQ6 169 aa4.11□□□□□ -1.75
VRK2-206ENST00000435505 LRBAP50851 2863 aa4.1□□□□□ -1.75
VRK2-206ENST00000435505 CNOT1A5YKK6 2376 aaKnown RBP4.1□□□□□ -1.75
VRK2-206ENST00000435505 HTN1P15515 57 aa4.1□□□□□ -1.75
VRK2-206ENST00000435505 CMC4P56277 68 aaPredicted RBP4.1□□□□□ -1.75
VRK2-206ENST00000435505 NTM-AS1Q6ZSK4 140 aa4.1□□□□□ -1.75
VRK2-206ENST00000435505 Q8N9L7 120 aa4.1□□□□□ -1.75
VRK2-206ENST00000435505 FDCSPQ8NFU4 85 aa4.1□□□□□ -1.75
VRK2-206ENST00000435505 LINC01560Q8TB33 94 aa4.1□□□□□ -1.75
VRK2-206ENST00000435505 A8MUN3 132 aa4.1□□□□□ -1.75
VRK2-206ENST00000435505 M0R378 163 aa4.1□□□□□ -1.75
VRK2-206ENST00000435505 SYCNQ0VAF6 134 aa4.1□□□□□ -1.75
VRK2-206ENST00000435505 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
VRK2-206ENST00000435505 IGHV3-11P01762 117 aa4.09□□□□□ -1.75
VRK2-206ENST00000435505 UBE2BP63146 152 aa4.09□□□□□ -1.75
VRK2-206ENST00000435505 SORL1Q92673 2214 aa4.09□□□□□ -1.75
VRK2-206ENST00000435505 AKAP13Q12802 2813 aa4.09□□□□□ -1.76
VRK2-206ENST00000435505 CUL9Q8IWT3 2517 aa4.09□□□□□ -1.76
VRK2-206ENST00000435505 GPR179Q6PRD1 2367 aa4.08□□□□□ -1.76
VRK2-206ENST00000435505 LY6HO94772 140 aa4.08□□□□□ -1.76
VRK2-206ENST00000435505 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
VRK2-206ENST00000435505 LINC01006Q8NI28 216 aa4.08□□□□□ -1.76
VRK2-206ENST00000435505 MAP1BP46821 2468 aaKnown RBP4.08□□□□□ -1.76
VRK2-206ENST00000435505 IGKV4-1P06312 121 aa4.07□□□□□ -1.76
VRK2-206ENST00000435505 Q5VV11 94 aa4.07□□□□□ -1.76
VRK2-206ENST00000435505 PTPRZ1P23471 2315 aaPredicted RBP4.07□□□□□ -1.76
VRK2-206ENST00000435505 IGHV3-53P01767 116 aa4.07□□□□□ -1.76
VRK2-206ENST00000435505 C8orf17Q9NRJ1 99 aa4.07□□□□□ -1.76
VRK2-206ENST00000435505 CDC42SE2Q9NRR3 84 aa4.07□□□□□ -1.76
VRK2-206ENST00000435505 ATMQ13315 3056 aa4.07□□□□□ -1.76
VRK2-206ENST00000435505 C16orf90A8MZG2 172 aa4.06□□□□□ -1.76
VRK2-206ENST00000435505 ZNF73O43830 326 aaPredicted RBP4.06□□□□□ -1.76
VRK2-206ENST00000435505 PRB2P02812 416 aaPredicted RBP4.06□□□□□ -1.76
VRK2-206ENST00000435505 C5orf56Q8N8D9 126 aa4.06□□□□□ -1.76
VRK2-206ENST00000435505 MUC7Q8TAX7 377 aa4.06□□□□□ -1.76
VRK2-206ENST00000435505 MINOS1-NBL1R4GNA1 71 aa4.06□□□□□ -1.76
VRK2-206ENST00000435505 COL12A1Q99715 3063 aa4.06□□□□□ -1.76
VRK2-206ENST00000435505 ASH1LQ9NR48 2969 aaKnown RBP4.06□□□□□ -1.76
VRK2-206ENST00000435505 APC2O95996 2303 aa4.06□□□□□ -1.76
VRK2-206ENST00000435505 IGKV3OR2-268A0A0C4DH90 116 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms