RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 IGKV2D-28P01615 120 aa12.85□□□□□ -0.35
CLK1-205ENST00000434813 TRACP01848 142 aa12.85□□□□□ -0.35
CLK1-205ENST00000434813 XCL1P47992 114 aa12.85□□□□□ -0.35
CLK1-205ENST00000434813 LINC01561Q8N1V8 128 aa12.85□□□□□ -0.35
CLK1-205ENST00000434813 LINC00337Q8N6G1 96 aa12.85□□□□□ -0.35
CLK1-205ENST00000434813 A0A096LPF7 62 aa12.84□□□□□ -0.35
CLK1-205ENST00000434813 RPL28P46779 137 aaKnown RBP12.84□□□□□ -0.35
CLK1-205ENST00000434813 CCL18P55774 89 aa12.84□□□□□ -0.35
CLK1-205ENST00000434813 DEFB4AO15263 64 aa12.83□□□□□ -0.36
CLK1-205ENST00000434813 Q8IZM0 81 aa12.83□□□□□ -0.36
CLK1-205ENST00000434813 DAD1P61803 113 aa12.82□□□□□ -0.36
CLK1-205ENST00000434813 C6orf226Q5I0X4 101 aa12.82□□□□□ -0.36
CLK1-205ENST00000434813 C3orf56Q8N813 242 aa12.82□□□□□ -0.36
CLK1-205ENST00000434813 Q8NAQ8 132 aa12.82□□□□□ -0.36
CLK1-205ENST00000434813 MIFP14174 115 aa12.81□□□□□ -0.36
CLK1-205ENST00000434813 CLPSL2Q6UWE3 100 aa12.81□□□□□ -0.36
CLK1-205ENST00000434813 TRAV26-1A0A087WT03 109 aa12.81□□□□□ -0.36
CLK1-205ENST00000434813 FAM240AA0A1B0GVK7 77 aa12.81□□□□□ -0.36
CLK1-205ENST00000434813 TRRAPQ9Y4A5 3859 aa12.8□□□□□ -0.36
CLK1-205ENST00000434813 A0A1B0GV72 72 aa12.8□□□□□ -0.36
CLK1-205ENST00000434813 PFN2P35080 140 aa12.8□□□□□ -0.36
CLK1-205ENST00000434813 FAM218AQ96MZ4 157 aa12.8□□□□□ -0.36
CLK1-205ENST00000434813 FBN1P35555 2871 aaKnown RBP12.8□□□□□ -0.36
CLK1-205ENST00000434813 ATP5G1P05496 136 aa12.79□□□□□ -0.36
CLK1-205ENST00000434813 WIPF1O43516 503 aa12.79□□□□□ -0.36
CLK1-205ENST00000434813 CELA1Q9UNI1 258 aa12.79□□□□□ -0.36
CLK1-205ENST00000434813 C11orf68Q9H3H3 251 aaKnown RBP12.78□□□□□ -0.36
CLK1-205ENST00000434813 CD164L2Q6UWJ8 174 aa12.78□□□□□ -0.36
CLK1-205ENST00000434813 LINC00269Q8N2A0 174 aa12.78□□□□□ -0.36
CLK1-205ENST00000434813 COL6A5A8TX70 2615 aa12.76□□□□□ -0.37
CLK1-205ENST00000434813 NBEAL2Q6ZNJ1 2754 aa12.76□□□□□ -0.37
CLK1-205ENST00000434813 SNCGO76070 127 aa12.76□□□□□ -0.37
CLK1-205ENST00000434813 SMIM11BQ8TCY0 68 aa12.76□□□□□ -0.37
CLK1-205ENST00000434813 CKS1BP61024 79 aa12.76□□□□□ -0.37
CLK1-205ENST00000434813 SPART-AS1P0CW21 52 aa12.75□□□□□ -0.37
CLK1-205ENST00000434813 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
CLK1-205ENST00000434813 ANGP03950 147 aaKnown RBP12.74□□□□□ -0.37
CLK1-205ENST00000434813 REG3AQ06141 175 aa12.74□□□□□ -0.37
CLK1-205ENST00000434813 BAALC-AS2P0C853 105 aa12.74□□□□□ -0.37
CLK1-205ENST00000434813 CXCL5P42830 114 aa12.74□□□□□ -0.37
CLK1-205ENST00000434813 KIAA0087Q14695 138 aa12.74□□□□□ -0.37
CLK1-205ENST00000434813 MRPL23Q16540 153 aaKnown RBP12.74□□□□□ -0.37
CLK1-205ENST00000434813 IGHV4-30-4P0DP06 118 aa12.73□□□□□ -0.37
CLK1-205ENST00000434813 Q8N3U1 123 aa12.73□□□□□ -0.37
CLK1-205ENST00000434813 H0YGX0 51 aa12.72□□□□□ -0.37
CLK1-205ENST00000434813 C15orf53Q8NAA6 179 aa12.72□□□□□ -0.37
CLK1-205ENST00000434813 C22orf24Q9Y442 160 aa12.72□□□□□ -0.37
CLK1-205ENST00000434813 OXLD1Q5BKU9 147 aa12.71□□□□□ -0.37
CLK1-205ENST00000434813 MDFIQ99750 246 aa12.71□□□□□ -0.37
CLK1-205ENST00000434813 LELP1Q5T871 98 aa12.71□□□□□ -0.38
CLK1-205ENST00000434813 CFAP161Q6P656 301 aa12.71□□□□□ -0.38
CLK1-205ENST00000434813 IGLV10-54A0A075B6I4 117 aa12.7□□□□□ -0.38
CLK1-205ENST00000434813 COX17Q14061 63 aa12.7□□□□□ -0.38
CLK1-205ENST00000434813 Q6Q795 121 aa12.7□□□□□ -0.38
CLK1-205ENST00000434813 A0A087WYN8 130 aa12.69□□□□□ -0.38
CLK1-205ENST00000434813 ACYP1P07311 99 aa12.69□□□□□ -0.38
CLK1-205ENST00000434813 GAGE2BQ13066 116 aa12.69□□□□□ -0.38
CLK1-205ENST00000434813 KRTAP21-3Q3LHN1 58 aa12.69□□□□□ -0.38
CLK1-205ENST00000434813 GAGE2EQ4V326 116 aa12.69□□□□□ -0.38
CLK1-205ENST00000434813 GAGE2DQ9UEU5 116 aa12.69□□□□□ -0.38
CLK1-205ENST00000434813 MALP21145 153 aa12.69□□□□□ -0.38
CLK1-205ENST00000434813 Q9HAA7 133 aa12.69□□□□□ -0.38
CLK1-205ENST00000434813 HTN3P15516 51 aa12.68□□□□□ -0.38
CLK1-205ENST00000434813 DNAL4O96015 105 aa12.67□□□□□ -0.38
CLK1-205ENST00000434813 OR13C6PQ8NH95 151 aa12.67□□□□□ -0.38
CLK1-205ENST00000434813 NDUFC2O95298 119 aa12.66□□□□□ -0.38
CLK1-205ENST00000434813 TTC32Q5I0X7 151 aa12.66□□□□□ -0.38
CLK1-205ENST00000434813 INAFM2P0DMQ5 153 aa12.65□□□□□ -0.38
CLK1-205ENST00000434813 STAB1Q9NY15 2570 aa12.65□□□□□ -0.38
CLK1-205ENST00000434813 PRR34Q9NV39 138 aa12.64□□□□□ -0.39
CLK1-205ENST00000434813 KLK5Q9Y337 293 aaPredicted RBP12.63□□□□□ -0.39
CLK1-205ENST00000434813 KRTAP10-11P60412 298 aa12.62□□□□□ -0.39
CLK1-205ENST00000434813 LECT2O14960 151 aa12.62□□□□□ -0.39
CLK1-205ENST00000434813 EGFEM1PQ0D2K5 195 aa12.62□□□□□ -0.39
CLK1-205ENST00000434813 ANAPC13Q9BS18 74 aa12.62□□□□□ -0.39
CLK1-205ENST00000434813 NANOS2P60321 138 aaKnown RBP12.61□□□□□ -0.39
CLK1-205ENST00000434813 SPAG11BQ08648 103 aa12.61□□□□□ -0.39
CLK1-205ENST00000434813 MUC7Q8TAX7 377 aa12.61□□□□□ -0.39
CLK1-205ENST00000434813 TRBV7-7A0A0K0K1E9 115 aa12.6□□□□□ -0.39
CLK1-205ENST00000434813 C9orf116Q5BN46 136 aaPredicted RBP12.6□□□□□ -0.39
CLK1-205ENST00000434813 KLK12Q9UKR0 248 aa12.59□□□□□ -0.39
CLK1-205ENST00000434813 NDUFV3P56181 108 aaKnown RBP12.59□□□□□ -0.39
CLK1-205ENST00000434813 SDIM1Q6ZPB5 146 aa12.59□□□□□ -0.39
CLK1-205ENST00000434813 LYPD5Q6UWN5 251 aa12.58□□□□□ -0.4
CLK1-205ENST00000434813 TMEM126AQ9H061 195 aa12.58□□□□□ -0.4
CLK1-205ENST00000434813 A0A1B0GX51 115 aa12.57□□□□□ -0.4
CLK1-205ENST00000434813 PRR3P79522 188 aaKnown RBP12.57□□□□□ -0.4
CLK1-205ENST00000434813 ENHOQ6UWT2 76 aa12.57□□□□□ -0.4
CLK1-205ENST00000434813 OBSCN-AS1Q96MR7 158 aa12.57□□□□□ -0.4
CLK1-205ENST00000434813 PKD1L1Q8TDX9 2849 aa12.57□□□□□ -0.4
CLK1-205ENST00000434813 A0A0J9YWU9 116 aa12.57□□□□□ -0.4
CLK1-205ENST00000434813 SMCR5Q8TEV8 140 aa12.57□□□□□ -0.4
CLK1-205ENST00000434813 H3BNG1 76 aa12.56□□□□□ -0.4
CLK1-205ENST00000434813 LINC00167Q96N53 147 aa12.56□□□□□ -0.4
CLK1-205ENST00000434813 C10orf25Q5T742 122 aa12.55□□□□□ -0.4
CLK1-205ENST00000434813 UNQ6190/PRO20217Q6UXQ8 127 aa12.55□□□□□ -0.4
CLK1-205ENST00000434813 C6orf223Q8N319 242 aa12.55□□□□□ -0.4
CLK1-205ENST00000434813 NHLRC4P0CG21 123 aaPredicted RBP12.55□□□□□ -0.4
CLK1-205ENST00000434813 LINC00643Q86TS7 51 aa12.55□□□□□ -0.4
CLK1-205ENST00000434813 C9orf129Q5T035 196 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms